Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00604 ATGCAAAAATGCATCGCCGCCTTAGAGAGGGAAGCACTTGCGCGATCAATGGTGACGATGCGGAAGCGAGAATGTCGACTTGAGCCGATCACCGCTTCAACAAAGCGTTTACGAGGTCAGGTGAAGAGGAAGAAGGAGGAGGTGTTAGGAATTTCCAAAATTCAGCGACCAGGATCAGGGGGCGATTTGCCCCAGGGTGGCGAGTTCAACCCTTATCCTATTGCACGGAGGGTAAATTCCTCTCATACCGTGGTCATGGATGATGACATTGAGAGTGCTAGTTTGGGGGTATACCAAGACAGACCAAGGACTTTCCCTGACATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTCTTAGTACTTCTTCTGTTCGCATTTGGATTAATATTCTACGTTGGAGCAAGAACTTCCCCTATTATTGTGTTTGTCTTCTCGGTTTGCATTGTCAGCTTCTGCTTTTCAATATATCTCACCAAATGGGTGCTCTCGAAAGATGAAGGGCCACCGGAGATGGCTCAGATTTCAGAAGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATAGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCTGGAATAGGGAGGTCAACAACTGCCTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGCTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCGAATGTCAGGGTCTCTAGTGCTGCCAGACGGTCTGCGAGGGAGGCATTGCAGATCGCTGTTCGGGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATCCTGTATGCTTCCTTTCATGTTTGGTTGGATGTGGGTTCGCCAGGTTCAACCAAGGTTACCGACTTGCCTCTTCTCCTTGTGGGTTACGGTTTTGGGGCTTCTTTCGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTTTACTAAAGCTGCTGATGTTGGAGCAGACCTTGTTGGAAAGGTTGAGCAGGGGATACCAGAAGATGATCCTAGAAATCCTGCTGTTATTGCAGATCTGGTTGGGGACAATGTGGGTGATTGTGCCGCCCGAGGTGCAGATCTTTTCGAAAGCATTGCTGCTGAAATCATTAGTGCCATGATACTTGGGGGAACAATGGCTCAACGCTGTAAAATTGAAGATCCATCTGGTTTCATTTTATTTCCGCTGGTAGTACACTCCTTTGATCTGGTGATTTCATCAATTGGCATTCTCTCTATCCGGAGGGGTACTCGTGAATCTGGTGTGAAGAGTCCGGTAGAGGATCCAATGACTATTCTGCAGAGAGGATATTCTGTCACTATTGTTTTGGCTGTTATAACATTTGGCGTGTCTACCCGGTGGTTGCTTCATACTGAACAAGCACCTTCTGCATGGTTCAACTTTGCCTTGTGTGGCTTGGTTGGTATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAGCCTGTGCGTTCATTAGCTCTTTCTAGCTCCACAGGCCATGGGACAAACATAATTGCTGGAGTCAGCTTGGGCCTGGAATCAACAGCACTTCCCGTTCTTGTTATTAGTGTTTCTATTGTTTCAGCTTTCTGGTTGGGTCGCACATCAGGACTTGTGGATGAAGATGGAAACCCAACAGGTGGGCTATTTGGTACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAAATGAGTCAGCAGCCAGAAAGCGTTCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAATACAACTAAAGCTACCACAAAAGGTTTTGCCATTGGCTCTGCAGCCCTTGCATCCTTCCTACTTTTTAGTGCTTATATGGATGAGGTAGCTACATTCGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTATCTCTTTAGTGCTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTTGTAAAGGAAGTTAGAAAACAGTTCCTTGAGAGGCCTGGTATAATGGACTATACGGAGAAACCAGAATATGGACGCTGCGTTGCTATTGTAGCATCAGCATCTCTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATCATTTCTCCCATGGCAGTTGGTGGAACTTTGTTACCTTACCTGCATTTTGTATTGAACATAACTTGGACATTCAAGGGGTACCATTTGGCACTCTCTGCATCTCTTCCTCTACTTGTCTTGGTTATGTCTTGGAATATGGTTCAAGAAGTTGTTCTCATATCAATTGCAGGCTTCCTCTTTAGAATATTGGGACACTACACCGGGCAACCGCTTCTAGGGGCCAAGGTCGTTGCTGCGATGCTGATGTTCGCAACAGTTTCCGGTATTCTCATGGCCCTTTTTCTTAACACAGCAGGGGGTGCCTGGGACAACGCCAAGAAGTATATAGAGACTGGGGTTCTTGGAGGCAAAGGTAGCGATAGTCATAAAGCAGCCGTAACCGGGGACACCGTTGGTGACCCATTCAAGGACACAGCAGGGCCTTCCCTTCACGTTCTGATAAAAATGCTCGCAACCATAACGCTGGTGATGGCCCCGATCTTTCTCTAG 2811 46.07 MQKCIAALEREALARSMVTMRKRECRLEPITASTKRLRGQVKRKKEEVLGISKIQRPGSGGDLPQGGEFNPYPIARRVNSSHTVVMDDDIESASLGVYQDRPRTFPDMRSKVNTPLIFRILMGINIRVLLVLLLFAFGLIFYVGARTSPIIVFVFSVCIVSFCFSIYLTKWVLSKDEGPPEMAQISEAIRDGAEGFFRTQYSTISKMAMLLAVVILCIYLFRSTTPQQESSGIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYASFHVWLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIFTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKSPVEDPMTILQRGYSVTIVLAVITFGVSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGRTSGLVDEDGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAHEPFKQVDIAIPEVFVGGLLGSMLIYLFSAWACSAVGRTAQEVVKEVRKQFLERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGGTLLPYLHFVLNITWTFKGYHLALSASLPLLVLVMSWNMVQEVVLISIAGFLFRILGHYTGQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDSHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 936
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6402349 6414569 + CmoCh17G006040.1 Cmo17g00604 400987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00604 936 Pfam Inorganic H+ pyrophosphatase 160 931 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo17g00604 936 PANTHER INORGANIC DIPHOSPHATASE-RELATED 103 787 - -
Cmo17g00604 936 PIRSF H+-PPtase 145 936 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo17g00604 936 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 103 787 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo17g00604 936 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 148 936 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo17g00604 936 PANTHER INORGANIC DIPHOSPHATASE-RELATED 829 936 - -
Cmo17g00604 936 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 829 936 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00547 Cmo-Chr10:2457275 Cmo17g00604 Cmo-Chr17:6402349 1.93E-23 dispersed
Cmo12g01043 Cmo-Chr12:9690983 Cmo17g00604 Cmo-Chr17:6402349 9.84E-32 dispersed
Cmo17g00604 Cmo-Chr17:6402349 Cmo11g00507 Cmo-Chr11:2436611 1.99E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00604 K23025 - csv:101217198 1422.14