Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00604 | ATGCAAAAATGCATCGCCGCCTTAGAGAGGGAAGCACTTGCGCGATCAATGGTGACGATGCGGAAGCGAGAATGTCGACTTGAGCCGATCACCGCTTCAACAAAGCGTTTACGAGGTCAGGTGAAGAGGAAGAAGGAGGAGGTGTTAGGAATTTCCAAAATTCAGCGACCAGGATCAGGGGGCGATTTGCCCCAGGGTGGCGAGTTCAACCCTTATCCTATTGCACGGAGGGTAAATTCCTCTCATACCGTGGTCATGGATGATGACATTGAGAGTGCTAGTTTGGGGGTATACCAAGACAGACCAAGGACTTTCCCTGACATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTCTTAGTACTTCTTCTGTTCGCATTTGGATTAATATTCTACGTTGGAGCAAGAACTTCCCCTATTATTGTGTTTGTCTTCTCGGTTTGCATTGTCAGCTTCTGCTTTTCAATATATCTCACCAAATGGGTGCTCTCGAAAGATGAAGGGCCACCGGAGATGGCTCAGATTTCAGAAGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATAGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCTGGAATAGGGAGGTCAACAACTGCCTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGCTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCGAATGTCAGGGTCTCTAGTGCTGCCAGACGGTCTGCGAGGGAGGCATTGCAGATCGCTGTTCGGGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATCCTGTATGCTTCCTTTCATGTTTGGTTGGATGTGGGTTCGCCAGGTTCAACCAAGGTTACCGACTTGCCTCTTCTCCTTGTGGGTTACGGTTTTGGGGCTTCTTTCGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTTTACTAAAGCTGCTGATGTTGGAGCAGACCTTGTTGGAAAGGTTGAGCAGGGGATACCAGAAGATGATCCTAGAAATCCTGCTGTTATTGCAGATCTGGTTGGGGACAATGTGGGTGATTGTGCCGCCCGAGGTGCAGATCTTTTCGAAAGCATTGCTGCTGAAATCATTAGTGCCATGATACTTGGGGGAACAATGGCTCAACGCTGTAAAATTGAAGATCCATCTGGTTTCATTTTATTTCCGCTGGTAGTACACTCCTTTGATCTGGTGATTTCATCAATTGGCATTCTCTCTATCCGGAGGGGTACTCGTGAATCTGGTGTGAAGAGTCCGGTAGAGGATCCAATGACTATTCTGCAGAGAGGATATTCTGTCACTATTGTTTTGGCTGTTATAACATTTGGCGTGTCTACCCGGTGGTTGCTTCATACTGAACAAGCACCTTCTGCATGGTTCAACTTTGCCTTGTGTGGCTTGGTTGGTATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAGCCTGTGCGTTCATTAGCTCTTTCTAGCTCCACAGGCCATGGGACAAACATAATTGCTGGAGTCAGCTTGGGCCTGGAATCAACAGCACTTCCCGTTCTTGTTATTAGTGTTTCTATTGTTTCAGCTTTCTGGTTGGGTCGCACATCAGGACTTGTGGATGAAGATGGAAACCCAACAGGTGGGCTATTTGGTACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAAATGAGTCAGCAGCCAGAAAGCGTTCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAATACAACTAAAGCTACCACAAAAGGTTTTGCCATTGGCTCTGCAGCCCTTGCATCCTTCCTACTTTTTAGTGCTTATATGGATGAGGTAGCTACATTCGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTATCTCTTTAGTGCTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTTGTAAAGGAAGTTAGAAAACAGTTCCTTGAGAGGCCTGGTATAATGGACTATACGGAGAAACCAGAATATGGACGCTGCGTTGCTATTGTAGCATCAGCATCTCTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATCATTTCTCCCATGGCAGTTGGTGGAACTTTGTTACCTTACCTGCATTTTGTATTGAACATAACTTGGACATTCAAGGGGTACCATTTGGCACTCTCTGCATCTCTTCCTCTACTTGTCTTGGTTATGTCTTGGAATATGGTTCAAGAAGTTGTTCTCATATCAATTGCAGGCTTCCTCTTTAGAATATTGGGACACTACACCGGGCAACCGCTTCTAGGGGCCAAGGTCGTTGCTGCGATGCTGATGTTCGCAACAGTTTCCGGTATTCTCATGGCCCTTTTTCTTAACACAGCAGGGGGTGCCTGGGACAACGCCAAGAAGTATATAGAGACTGGGGTTCTTGGAGGCAAAGGTAGCGATAGTCATAAAGCAGCCGTAACCGGGGACACCGTTGGTGACCCATTCAAGGACACAGCAGGGCCTTCCCTTCACGTTCTGATAAAAATGCTCGCAACCATAACGCTGGTGATGGCCCCGATCTTTCTCTAG | 2811 | 46.07 | MQKCIAALEREALARSMVTMRKRECRLEPITASTKRLRGQVKRKKEEVLGISKIQRPGSGGDLPQGGEFNPYPIARRVNSSHTVVMDDDIESASLGVYQDRPRTFPDMRSKVNTPLIFRILMGINIRVLLVLLLFAFGLIFYVGARTSPIIVFVFSVCIVSFCFSIYLTKWVLSKDEGPPEMAQISEAIRDGAEGFFRTQYSTISKMAMLLAVVILCIYLFRSTTPQQESSGIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYASFHVWLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIFTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKSPVEDPMTILQRGYSVTIVLAVITFGVSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGRTSGLVDEDGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAHEPFKQVDIAIPEVFVGGLLGSMLIYLFSAWACSAVGRTAQEVVKEVRKQFLERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGGTLLPYLHFVLNITWTFKGYHLALSASLPLLVLVMSWNMVQEVVLISIAGFLFRILGHYTGQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDSHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL | 936 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6402349 | 6414569 | + | CmoCh17G006040.1 | Cmo17g00604 | 400987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00604 | 936 | Pfam | Inorganic H+ pyrophosphatase | 160 | 931 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo17g00604 | 936 | PANTHER | INORGANIC DIPHOSPHATASE-RELATED | 103 | 787 | - | - | |
Cmo17g00604 | 936 | PIRSF | H+-PPtase | 145 | 936 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo17g00604 | 936 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 103 | 787 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo17g00604 | 936 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 148 | 936 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo17g00604 | 936 | PANTHER | INORGANIC DIPHOSPHATASE-RELATED | 829 | 936 | - | - | |
Cmo17g00604 | 936 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 829 | 936 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00547 | Cmo-Chr10:2457275 | Cmo17g00604 | Cmo-Chr17:6402349 | 1.93E-23 | dispersed | |
Cmo12g01043 | Cmo-Chr12:9690983 | Cmo17g00604 | Cmo-Chr17:6402349 | 9.84E-32 | dispersed | |
Cmo17g00604 | Cmo-Chr17:6402349 | Cmo11g00507 | Cmo-Chr11:2436611 | 1.99E-23 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00604 | K23025 | - | csv:101217198 | 1422.14 |