Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00637 ATGGCTGCTCTTCTTCGAGTGCTCTTTCTCTTCTCTCTCCTCCTCCCACTTTCTTCTTCTTCAATCGATAATTCCAAGAAGACCTTCATTGTGCAGGTTAACAGAGATGCCAGCAAGCCTTCCATTTTCCCAACACACAGGCACTGGTACGAGTCCTCTCTGGCCTCCATCTCTCCCAACAAGCCAACACCGTCACAACCAGATGCTTCTGGTAGCGATGGACCCATCATTCATACATATGAAACCCTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTTTGAAGTTCAGAACCTTCAAACCCTTCCCCATATCGCCGCCGTCATCCCTGAACAGGTTCGCCATCCTCATACAACTCGTTCCCCTGAGTTTCTTGGCCTTACGACCTCTGATAGTGCAGGGTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATCGGAGTTATCGATACTGGTATTTGGCCGGAGAGGCAGAGCTTCAATGACCGCGATCTGGGTCCAATTCCTTCCAAATGGAAAGGCCGGTGCTTGGAGTCTAAACACTTCCCAGCCACCTCTTGCAACCGTAAGCTTATTGGGGCTCGATTCTTCTGTAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGAATCGCTCGCCGCGTGATTCCGATGGTCATGGTACTCACACGGCGTCCATTGCTGCAGGTCGTTACGTGTTTCCAGCTTCAACTTTAGGCTACGCTCGTGGTAAAGCGGCCGGAATGGCTCCTAAGGCCCGTCTTGCTGCCTATAAAGTCTGTTGGAACGCCGGCTGCTACGACTCTGACATTCTTGCAGCTTTTGATGCTGCCGTTTCCGACGGTGTGGATGTGGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCGTACTATCTCGATGCCATCGCTATTGGGGCTTTTAGAGCGGTGGCAGCCGGTGTTTTTGTCTCGGCATCAGCCGGTAACGGTGGCCCAGGTGGGCTCACTGTGACTAATGTAGCACCATGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAACGGGAGGGATATACTAGGTACTAGTGTCTACGGCGGACCGGCTTTGGTTCCTGGTCGTATGCATCCTCTAATTTATGCAGGAACCGAAGGCGGTGATGGGTATTCTTCGTCTCTATGCTTAGAAGGCTCATTGAACCCAAATCTAGTGAAAGGGAAGATTGTAGTATGTGATAGGGGCATAAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGATTAGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGTTTGGTAGCTGACTGCCATGTTCTACCCGCCACTGCCGTCGGTGCAGCCGGCGGCGACGAGATCCGCAAATATATTGCAGAAGCAGCGAAGTCTAAGTCACCGCCAACAGCTACAATTTTGTTCAAGGGAACTCGGCTTGGAGTCAGGCCAGCACCAGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTGAAGCCTGATGTGATTGCGCCAGGATTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGGCCCTCTGGAATTCCCACAGACAAGCGTACCACAGAGTTCAACATACTTTCCGGCACTTCCATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCTCTGCTTAAAGCGGCACACCCAGGATGGAGTCCAGCCGCTATAAAATCAGCCCTAATGACCACAGCTTATACCTTGGACAACAGGGGTGAGACAATGTTAGACGAATCTTCAGGCAATACTTCTACGGTCTTAGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCAATGGACCCTGGCTTAATCTATGACCTGAACACATATGATTATGTAGATTTCTTGTGTAACGCCAACTACACCACTAAGAACATCCAAGTTATTACGGGGAAGATTGCAGATTGCAGCGGGGCAAAAAGGGCTGGCCATACTGGGAATTTGAACTACCCTTTATTGTCTGTGGTGTTTCAACAATATGGTAAACAAAAGATGTCTACGCATTTCATTAGAACTGTGACCAACGTTGGGGACGCTAATTCTATCTACAAGGTAATAATCAAGCCACCAAGAGGAATTTCAGTGACTGTGGAGCCAGAAAAGCTGGCGTTCAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTTTAAGACTTTCCTCTGGGAGCTCTAGCATGAAGAGTGGTTCCATAGTTTGGACTGATGGAAAGCACGTAGTTACTAGTCCTTTGGTTGTCACCATGCAGCAACCCCTGCAGTAG 2364 49.49 MAALLRVLFLFSLLLPLSSSSIDNSKKTFIVQVNRDASKPSIFPTHRHWYESSLASISPNKPTPSQPDASGSDGPIIHTYETLFHGFSAKLSPFEVQNLQTLPHIAAVIPEQVRHPHTTRSPEFLGLTTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGRCLESKHFPATSCNRKLIGARFFCSGYEATNGKMNETTENRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVAAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRDILGTSVYGGPALVPGRMHPLIYAGTEGGDGYSSSLCLEGSLNPNLVKGKIVVCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGAAGGDEIRKYIAEAAKSKSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNANYTTKNIQVITGKIADCSGAKRAGHTGNLNYPLLSVVFQQYGKQKMSTHFIRTVTNVGDANSIYKVIIKPPRGISVTVEPEKLAFRRVGQKLSFLVRVQAMALRLSSGSSSMKSGSIVWTDGKHVVTSPLVVTMQQPLQ 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6651451 6653814 + CmoCh17G006370.1 Cmo17g00637 401020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00637 787 Pfam PA domain 383 471 IPR003137 -
Cmo17g00637 787 Gene3D - 350 497 - -
Cmo17g00637 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Cmo17g00637 787 CDD PA_subtilisin_like 356 489 - -
Cmo17g00637 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 5 786 - -
Cmo17g00637 787 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 5 786 - -
Cmo17g00637 787 ProSiteProfiles Serine proteases, subtilase domain profile. 121 628 - -
Cmo17g00637 787 Pfam Subtilase family 142 609 IPR000209 GO:0006508|GO:0008236
Cmo17g00637 787 Gene3D Peptidase S8/S53 domain 144 641 IPR036852 GO:0004252|GO:0006508
Cmo17g00637 787 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Cmo17g00637 787 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Cmo17g00637 787 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Cmo17g00637 787 CDD Peptidases_S8_3 115 594 IPR034197 -
Cmo17g00637 787 Pfam Peptidase inhibitor I9 28 115 IPR010259 -
Cmo17g00637 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 117 IPR037045 -
Cmo17g00637 787 SUPERFAMILY Subtilisin-like 116 632 IPR036852 GO:0004252|GO:0006508
Cmo17g00637 787 Gene3D - 645 783 - -
Cmo17g00637 787 Pfam Fibronectin type-III domain 676 780 IPR041469 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00797 Cmo17g00637 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g00637 Cmo-Chr17:6651451 Cmo20g00753 Cmo-Chr20:3786305 0 dispersed
Cmo17g00637 Cmo-Chr17:6651451 Cmo08g00797 Cmo-Chr8:5051702 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00637 - - csv:101210434 1363.21