Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00660 ATGGCGAATTTCCATCGATGTTCTTCTGTTTTCTTCTTCTTCTTCTTCCTCTGTTTTCTCCCTGTAATTTTCTCTCGATCGCCGGATAAGCAAGAGACTTTTATCGTTCACGTATCTAAATTGGAGAAGCCTTCTCTGTTCTCCTCTCATTATCGCTGGCACTCGTCAATTCTCGATTCACTCTCTCCTTCTTCTCGTCCGAGGAAGCTTCTTTACAACTACGAACGTGCCGTTAATGGTTTCGCCGCACGCATCACGGATGCTCAGGCGGCGGAGTTGCGTCGTGTTCCAGGTGTTGTTTCGGTGATTCCGGATCGGATGCGTCAGCTTCATACGACTCGGACGCCTCATTTTTTAGGTCTGGCGGATAACCTAGGGCTTTGGCCTGACACTAATTATGCGGATGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGAGCGGCCGAGTTTCTCTGATGAGGGTTTGTCTCCGGTGCCGGCAAGTTGGAAAGGAACCTGCGAGGCTGGGGAGGGATTTTCGGCTACGACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTTCTTTCACGGATACGAATCTAATATAGGAAGACCGCTTCACGGTTTGTCCGATTTCAAATCTGCTAGGGATTCGGATGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAGAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGCATGGCGAGCAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGTTGTTACGATTCTGACATCCTCGCCGCTATGGATCAGGCGATTGCCGATGGAGTCCACATCATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCCCCTGCCTACTATCGAGATTCTATCGCAATCGGAGCGTTTGGCGCGATGCAGCACGGCATTGTCGTCTCTTGCTCCGCCGGAAACTCCGGTCCCGGTCCTTACACGGCTGTGAATATCGCTCCATGGATCCTCACTGTTGGTGCATCCACAATTGACAGGGAGTTTCTTGCCGATGTGATTCTTGGAGACGGTAGGGTTTTCAGCGGCGTGTCTCTCTACTCCGGAGATCCTCTTGGCGATTCCAAACTTCCGCTGGTCTACGGTGGAGATTGCGGTAATAGGTATTGTTATTCTGGATCCCTCGATCCGTCAAAAGTTGCCGGGAAAATTGTCGTGTGCGATCGAGGAGGGAACGCCAGAGTCGCCAAAGGAAGCGCCGTGAAATCCGCCGGTGGTCTTGGTGTGATACTCGCCAACACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCGGGAACAATGATTGGAGAAATCGCCGGTAACAAGCTTAGAGACTACATCCATTCGGATCCGAATCCATCTGCAACAATCGTGTTTCGAGGAACTATTATTAGCGATTCGCCGCCGTCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCGAACTACCGAACGGCGGAGATTCTGAAACCGGACGTTATAGCTCCAGGAGTTAACATTTTGGCTGGCTGGAGCGGCTACAACAGTCCGTCTAGTCTAAGCATCGATACTCGAAGAGTTGAGTTCAATATCATCTCTGGAACTTCAATGTCCTGCCCTCACGTCAGCGGCGTCGCTGCATTGCTCCGGAAGGCTTTTCCGACATGGACACCGGCAGCAATCAAATCTGCTCTGATCACCACTTCTTACTCCTTGGACACTTCCGGCCGCCCAATCAAAGATCTCTCCACCAGCAACGACTCAAATCCGTTCGTCCATGGCGGCGGCCATATCGATCCCAACAAAGCTCTGAATCCAGGCCTGATATATGATCTCAATCCTCAGGACTACGTTTCATTTCTCTGCTCAATCGGTTACGATTCTAGACAAATAGCTGTTTTCGTGAAGGATTCTTCATACTCTAACCTATGTGAACACAAATTGAGCAATCCCGGCAATCTGAACTACCCATCATTCGCGGTCGTGTTCACTTCCAACGGCGAGGAGGTGGTGAAATATACAAGAACTGTCACAAATGTAGGAGATGAAGCCGATGCTGTTTATGAAGTGAAAGTAGAAGCCCCACAAGGCGTTGAAATCAGTGTTCTTCCAAACAAACTGGAGTTCAGCGCAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGAACTCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGTCACATCGTTAGGAGTCCAATTGCTGTCTCATTCAACACTGCATCCATAGCTTCGATGTAA 2319 49.89 MANFHRCSSVFFFFFFLCFLPVIFSRSPDKQETFIVHVSKLEKPSLFSSHYRWHSSILDSLSPSSRPRKLLYNYERAVNGFAARITDAQAAELRRVPGVVSVIPDRMRQLHTTRTPHFLGLADNLGLWPDTNYADDVIIGVLDTGIWPERPSFSDEGLSPVPASWKGTCEAGEGFSATTCNRKIIGARAFFHGYESNIGRPLHGLSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCYDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGIVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGDPLGDSKLPLVYGGDCGNRYCYSGSLDPSKVAGKIVVCDRGGNARVAKGSAVKSAGGLGVILANTEENGEELLADSHLIPGTMIGEIAGNKLRDYIHSDPNPSATIVFRGTIISDSPPSPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYNSPSSLSIDTRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWTPAAIKSALITTSYSLDTSGRPIKDLSTSNDSNPFVHGGGHIDPNKALNPGLIYDLNPQDYVSFLCSIGYDSRQIAVFVKDSSYSNLCEHKLSNPGNLNYPSFAVVFTSNGEEVVKYTRTVTNVGDEADAVYEVKVEAPQGVEISVLPNKLEFSAKKTTQSYEITFTKISGFKNSASFGSIQWSDGSHIVRSPIAVSFNTASIASM 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6842754 6845072 + CmoCh17G006600.1 Cmo17g00660 401043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00660 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 21 766 - -
Cmo17g00660 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 766 IPR045051 -
Cmo17g00660 772 Pfam PA domain 376 460 IPR003137 -
Cmo17g00660 772 Gene3D - 631 765 - -
Cmo17g00660 772 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cmo17g00660 772 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cmo17g00660 772 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Cmo17g00660 772 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Cmo17g00660 772 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252|GO:0006508
Cmo17g00660 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Cmo17g00660 772 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Cmo17g00660 772 Pfam Fibronectin type-III domain 663 762 IPR041469 -
Cmo17g00660 772 CDD PA_subtilisin_like 351 474 - -
Cmo17g00660 772 Gene3D - 345 481 - -
Cmo17g00660 772 SUPERFAMILY PA domain 365 466 IPR046450 -
Cmo17g00660 772 Pfam Subtilase family 135 583 IPR000209 GO:0006508|GO:0008236
Cmo17g00660 772 CDD Peptidases_S8_3 109 580 IPR034197 -
Cmo17g00660 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 111 IPR037045 -
Cmo17g00660 772 ProSiteProfiles Serine proteases, subtilase domain profile. 109 614 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00775 Cmo17g00660 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00143 Cmo-Chr5:626314 Cmo17g00660 Cmo-Chr17:6842754 3.77E-156 dispersed
Cmo09g00090 Cmo-Chr9:416229 Cmo17g00660 Cmo-Chr17:6842754 0 dispersed
Cmo17g00660 Cmo-Chr17:6842754 Cmo20g00753 Cmo-Chr20:3786305 0 dispersed
Cmo02g00862 Cmo-Chr2:5244539 Cmo17g00660 Cmo-Chr17:6842754 6.52E-58 transposed
Cmo10g00800 Cmo-Chr10:3726208 Cmo17g00660 Cmo-Chr17:6842754 0 wgd
Cmo11g00748 Cmo-Chr11:3648131 Cmo17g00660 Cmo-Chr17:6842754 0 wgd
Cmo17g00660 Cmo-Chr17:6842754 Cmo08g00775 Cmo-Chr8:4887730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00660 - - csv:101205194 1334.32