Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00679 | ATGAATTTAGGAGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCCAAATTCTTCTTCCTCGGTGCGGCGTTGTTTTCAGGTGTTTCTGCGTCTCTTTACCCTATGGTAGTGTTGAAAACTCGACAACAGGTCGCTCATTCGCAGCTTTCTTGCATCAGAACCGCCTTCCACCTTGTCCGGCACGAAGGTTTCCGAGCTCTCTACCGTGGATTTGGGACTTCTCTGATGGGGACTATCCCGGCTAGGGCTCTGTACATGGGAGCTCTTGAGTTTACTAAGAGCTATGTAGGGACTGCCACTGTTAGAGTCGGATTTCCAGAGGCCACTGCCGCTACCATTGCTAATGCAGCTGCTGGATTGAGTGCTGCAATGGCTGCTCAGCTTGTGTGGACTCCTGTTGATGTTGTGAGTCAGAGACTCATGGTTCAAACTCATTTCAACAATCCTAATCCTTCCTCGACTCGTTACATTAATGGAGTCGATGCATTCCGTAAGATCCTCAATGCCGATGGTATCCGAGGCTTGTATCGAGGTTTCGGGATATCGATTTTGACATATGCACCGTCGAATGCAGTGTGGTGGGCTTCTTATTATGTAGCACAGCGGTTAGTATGGGGCGGAATTGGATGCTATTACTCAAAGAAGCTTGATGAAGGCAATGAAAATGGAGGTTCAATCGTTTACAGACCGGATTCCAAGACGGTGATCGCAGTACAGGGCGCGAGCGCAGCCATGGCAGGGAGTATCTCAGCTCTGATAACAATGCCCCTCGATACAATCAAGACGAGATTGCAAGTTTTGGATGGGGATGAGAATGGTAGACGAGGGCCAACAATTGGACAGACATTGAGAAATCTGGTGAGGGAAGGCGGGTGGACGGCGTGCTACCGAGGGTTGGCGCCGCGATGCGCGTCGATGTCGATGTCTGCAACGACAATGATCACTACATATGAGTTCTTGAAACGGCTATCAACCAAGAATCGAGAGGGATTAACAAGCTGA | 1041 | 49.57 | MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLSCIRTAFHLVRHEGFRALYRGFGTSLMGTIPARALYMGALEFTKSYVGTATVRVGFPEATAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQTHFNNPNPSSTRYINGVDAFRKILNADGIRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCYYSKKLDEGNENGGSIVYRPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNREGLTS | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6942765 | 6943805 | - | CmoCh17G006790.1 | Cmo17g00679 | 401062 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00679 | 346 | SUPERFAMILY | Mitochondrial carrier | 23 | 333 | IPR023395 | - | |
Cmo17g00679 | 346 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
Cmo17g00679 | 346 | Pfam | Mitochondrial carrier protein | 251 | 340 | IPR018108 | - | |
Cmo17g00679 | 346 | Pfam | Mitochondrial carrier protein | 38 | 109 | IPR018108 | - | |
Cmo17g00679 | 346 | Pfam | Mitochondrial carrier protein | 126 | 217 | IPR018108 | - | |
Cmo17g00679 | 346 | Gene3D | Mitochondrial carrier domain | 30 | 344 | IPR023395 | - | |
Cmo17g00679 | 346 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 216 | IPR018108 | - | |
Cmo17g00679 | 346 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 1 | 342 | - | - | |
Cmo17g00679 | 346 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 247 | 336 | IPR018108 | - | |
Cmo17g00679 | 346 | PRINTS | Mitochondrial carrier protein signature | 81 | 99 | IPR002067 | GO:0055085 | |
Cmo17g00679 | 346 | PRINTS | Mitochondrial carrier protein signature | 132 | 154 | IPR002067 | GO:0055085 | |
Cmo17g00679 | 346 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 342 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo09g00356 | Cmo-Chr9:1537744 | Cmo17g00679 | Cmo-Chr17:6942765 | 7.42E-159 | dispersed | |
Cmo15g00236 | Cmo-Chr15:1176543 | Cmo17g00679 | Cmo-Chr17:6942765 | 4.19E-82 | dispersed | |
Cmo17g00679 | Cmo-Chr17:6942765 | Cmo02g00600 | Cmo-Chr2:3678691 | 7.11E-24 | dispersed | |
Cmo17g00679 | Cmo-Chr17:6942765 | Cmo08g00754 | Cmo-Chr8:4770418 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00679 | K15121 | - | csv:101210602 | 598.586 |