Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00688 | ATGAAAATCGAGTCGATGAGACGGGGAAGAATAAGGGAGAGGATCCGTCGAAGCCATCTTTATACGTTTGGTTGCCTCCGGGCAGATAGTGCACGGGAGGTTGACGATTCGAATCCTCTAACAGGACCTGGCTTCTCACGAACTGTTTGTTGTAACCAACCTCATCTCCATGAGAGGAATCCGTTGAGATACTGCACGAATTACATATCCACGACAAAGTATAATGTTCTTTCTTTCTTGCCTAAGGCTCTCTTTGAGCAATTCCGAAGGGTTGCCAATGTGTACTTTCTTATGGCTGCATTGTTATCGCTCACACCGGTGGCCCCATTTTCTGCCATGAGCATGATTGCACCTTTGGTATTTGTTGTTGGGCTCAGTATGGCGAAAGAAGCTCTAGAGGACTGGCGTCGATTTGTGCAGGATATGAAGGTTAATCTCAGGAAAGTTTGTGTCCATAAAGGGGAAGGTGTTTTTGGTTATAGACCATGGCACAAGATTCGAGTAGGAGATATACTGAAAGTAGAGAAGGATCAATTCTTTCCAGCCGATCTGCTTCTCTTGTCATCATGCTATGAGGACGGTATATGTTACGTCGAAACAATGAATTTGGATGGCGAGACTAATCTCAAAGTAAAGAGATCTTTGGAAGTAACCTTACCATTGGATGATGATGCAACTTTCAAAGATTTTACTGGAAAAATTTACTGTGAAGATCCCAACCCGAATCTTTACACATTTGTAGGTAACTTTGAGTATGATCGACAGATTTATCCTCTTGATCCCAGTCAGATTCTCCTTAGAGATTCAAAATTGAGGAATACAGCTTATGCCTATGGGGTGGTGATATTTACTGGACATGATAGCAAAGTCATGCAGAATGCTACTAAATCTCCTTCGAAAAGAAGTGGAATAGAGAGAAAAATGGACAAAATTATTTACATTCTTTTTACTCTCCTTATATTGATCTCATCATTCAGCTCAATAGGTTTTGCTGTGAAAACAAAGTACGAAATGACAGATTGGTGGTATTTACGAACTACTGGCGATGATCATGATCCATTGTACAACCCTCGTAAACCGACCTTATCAGGGCTCATACATTTAATCACAGCTCTTATACTTTATGGATATTTGATACCCATCTCGTTATATGTTTCCATCGAGATAGTTAAGGTTCTGCAAGCTTCCTTCATTAACCAAGATATTAACATGTATTGTGAAGAGACTGGCAATCCAGCTCGAGCTCGAACGTCAAACTTGAATGAGGAGTTGGGTCAGGTGGACACAATCCTATCTGACAAAACAGGCACTTTGACTTGCAATCAGATGGACTTTCTGAAATGTTCCATTGCTGGCACTGCATATGGTGTTAAAGCTAGTGAGGTTGAACTTGCAGCTGCAAGGCAGATGGCATATGATCTTGAGGAGGATGGAGAATATTCTGATGTTTATGGGCAAAAGAATAGCCGACAGCCTTCTATGGCAAATAGCAGAAAAGGGTCCGAGATTGAATTGGAGACTGTCGTTACTTCGGGTGATGGCAAGGATCAGAAGTCTGCCATAAAGTATTTTAGTTTCGAGGACAGCCGCCTAACTGGTGGAAACTGGTTGAATGAGCCCAATCCTGATGTCATTCTATTATTCTTCCGAATTTTAGGAATTTGTCACACTGCGATTCCCGAGCTGAACGAGGAGACTGGTGTTTATACATACGAGGCAGAGTCCCCCGATGAAGGCGCTTTTCTTGTTGCAGCAAGAGAATTTGGTTTTGAATTTTGTAAGAGAACACAGTCAACCTTGGTTGTCCGTGAAAAATATCCTTCACCTACCCAAATAGTTGAAAGGGAATACAAAATTTTGAATCTTTTGGATTTCACTAGCAAGAGAAAGAGAATGTCTGTAATTATTAGGGACGAGTTCGGCCAGATAATTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTCGATCGACTAGCAAAGAACGGAAGAATGTATGAGGAAGCTACCACAAGGCATTTGAATGAATATGGAGAAGCAGGGTTGCGAACTCTGGCACTTGCTTATAGGAAGCTTGAGGAGTCCGAATATAATGCTTGGAACAATGAGTTTCAAAAGGCTAAGACATCCATTGGAGGAGATAGAGATGCAATGCTTGAGCGAGTATCCGACCTCATGGAGAGAGAATTAACCCTTGTTGGTGCTACTGCAGTGGAGGATAAGTTGCAGAATGGGGTCCCCCAATGCATAGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTTCTGACAGGAGATAAGATGGAAACTGCCATCAACATAGGATATGCATGCAGTTTACTGCGACAGGGAATGAAGCGGATCTGCATATCGTCGAACTCGGATTCCTTAGCACAGGATGGCAAAGAGGCCATGAAAGCACATATTTTGAATCAAATCGCCAACGCCTCACAAATGATCAATCTGGAAAATGATCCACATGCTGCATTTGCTTTAATCATTGATGGGAAGACTCTAACCTATGCTCTCGAGGACGATATGAAGCTCCATTTCCTCGGGCTTGCTGTTGATTGTGCGTCGGTCATTTGCTGTCGAGTCTCCCCTAGACAGAAGGCTCTGATAACAAGGTTAGTGAAAGAAGGTACTGGGAAAACCACTTTAGCAATTGGCGATGGTGCAAATGATGTAGGAATGATTCAAGAGGCCGATATCGGTGTCGGTATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGATTTCTCTATTGCTCAATTTCGATTTCTGGAAAGGCTTCTGGTAGTCCATGGCCATTGGTGCTACAAGAGGATAGCACAAATGATATGCTACTTCTTCTACAAGAATATTGCATTTGGATTAACGCTGTTCTACTTTGAAGCATATGCTGGATTTTCTGGGCAATCAATCTATGATGATTTCTACATGTTATCATTTAATGTCATACTCACCTCATTGCCTGTAATTTCCCTTGGAGTTTTTGAGCAAGATGTTTCTTCTGAGGTCTGCCTCCAGTTCCCTGCACTGTATCAGCAAGGACCCAGAAACTTGTTCTTCGACTGGCCTCGGATTTTCGGATGGATGGGGAACGCTCTCTACTCCTCTCTAGTTACATTCTTCCTCAACCTCATCATCTTCTACGATCAGGCATTCCGCTCAGGCGGCCAAACTGCCGATATGACTACAGTGGGAACGACCATGTTTACGTGCATCATATGGGCAGTAAATTGCCAGATTGCTCTCACAATGAGCCATTTCACCTGGATCCAACACCTTTTCGTGTGGGGTAGTATCGCGATGTGGTATTTGTTCATCTTACTCTATGGAATGGTTTTATCCTCGGGGAATGCCTATAAAATCTTTGTTGAAGCACTAAGTCCTGCCCCTGTTTACTGGATAGCCACCATTTTAGTAACAATTACCTGTAATCTCCCATATCTTGCCCACATATCCTTCCAGAGAAGCTTCCATCCGTTGGATCATCAAATTATCCAAGAAATCAAATACTACAGAAAGGATGTTGAAGATTCACACATGTGGACCAGAGAAAGATCAAAGGCAAGGCAAAAGACAAAGATAGGATTCACAGCCAGAGTAGAAGCAAAGATCAGACAGCTGAAAGGAAAGCTGCAAAAGAAACATTCTTCCCTGGGCATGCCTCCTCCAAATGCTTCTGCTATATCATGA | 3705 | 42.75 | MKIESMRRGRIRERIRRSHLYTFGCLRADSAREVDDSNPLTGPGFSRTVCCNQPHLHERNPLRYCTNYISTTKYNVLSFLPKALFEQFRRVANVYFLMAALLSLTPVAPFSAMSMIAPLVFVVGLSMAKEALEDWRRFVQDMKVNLRKVCVHKGEGVFGYRPWHKIRVGDILKVEKDQFFPADLLLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNFEYDRQIYPLDPSQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSGIERKMDKIIYILFTLLILISSFSSIGFAVKTKYEMTDWWYLRTTGDDHDPLYNPRKPTLSGLIHLITALILYGYLIPISLYVSIEIVKVLQASFINQDINMYCEETGNPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKASEVELAAARQMAYDLEEDGEYSDVYGQKNSRQPSMANSRKGSEIELETVVTSGDGKDQKSAIKYFSFEDSRLTGGNWLNEPNPDVILLFFRILGICHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVREKYPSPTQIVEREYKILNLLDFTSKRKRMSVIIRDEFGQIILLCKGADSIIFDRLAKNGRMYEEATTRHLNEYGEAGLRTLALAYRKLEESEYNAWNNEFQKAKTSIGGDRDAMLERVSDLMERELTLVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICISSNSDSLAQDGKEAMKAHILNQIANASQMINLENDPHAAFALIIDGKTLTYALEDDMKLHFLGLAVDCASVICCRVSPRQKALITRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAYAGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPRNLFFDWPRIFGWMGNALYSSLVTFFLNLIIFYDQAFRSGGQTADMTTVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIAMWYLFILLYGMVLSSGNAYKIFVEALSPAPVYWIATILVTITCNLPYLAHISFQRSFHPLDHQIIQEIKYYRKDVEDSHMWTRERSKARQKTKIGFTARVEAKIRQLKGKLQKKHSSLGMPPPNASAIS | 1234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7022461 | 7027655 | - | CmoCh17G006880.1 | Cmo17g00688 | 401071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00688 | 1234 | Gene3D | - | 733 | 928 | IPR023214 | - | |
Cmo17g00688 | 1234 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 916 | 1164 | IPR032630 | - | |
Cmo17g00688 | 1234 | SFLD | p-type atpase | 415 | 939 | IPR044492 | - | |
Cmo17g00688 | 1234 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1226 | - | - | |
Cmo17g00688 | 1234 | Gene3D | - | 124 | 297 | - | - | |
Cmo17g00688 | 1234 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 64 | 1172 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cmo17g00688 | 1234 | Pfam | Phospholipid-translocating ATPase N-terminal | 51 | 116 | IPR032631 | - | |
Cmo17g00688 | 1234 | Gene3D | - | 597 | 732 | IPR023299 | GO:0000166 | |
Cmo17g00688 | 1234 | CDD | P-type_ATPase_APLT_Dnf-like | 67 | 1047 | - | - | |
Cmo17g00688 | 1234 | MobiDBLite | consensus disorder prediction | 1213 | 1234 | - | - | |
Cmo17g00688 | 1234 | Gene3D | - | 428 | 440 | IPR023214 | - | |
Cmo17g00688 | 1234 | Gene3D | - | 441 | 462 | IPR023299 | GO:0000166 | |
Cmo17g00688 | 1234 | Pfam | Cation transport ATPase (P-type) | 555 | 658 | - | - | |
Cmo17g00688 | 1234 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1226 | - | - | |
Cmo17g00688 | 1234 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 59 | 1160 | IPR023298 | - | |
Cmo17g00688 | 1234 | SFLD | Haloacid Dehalogenase | 415 | 939 | - | - | |
Cmo17g00688 | 1234 | SUPERFAMILY | HAD-like | 419 | 932 | IPR036412 | - | |
Cmo17g00688 | 1234 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 531 | 695 | IPR023299 | GO:0000166 | |
Cmo17g00688 | 1234 | SUPERFAMILY | Calcium ATPase, transduction domain A | 151 | 294 | IPR008250 | - | |
Cmo17g00688 | 1234 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 433 | 439 | IPR018303 | - | |
Cmo17g00688 | 1234 | PRINTS | P-type cation-transporting ATPase superfamily signature | 431 | 445 | - | - | |
Cmo17g00688 | 1234 | PRINTS | P-type cation-transporting ATPase superfamily signature | 888 | 907 | - | - | |
Cmo17g00688 | 1234 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 860 | 969 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo17g00688 | Cmo-Chr17:7022461 | Cmo18g00028 | Cmo-Chr18:119077 | 0 | dispersed | |
Cmo04g01690 | Cmo-Chr4:8573938 | Cmo17g00688 | Cmo-Chr17:7022461 | 4.85E-43 | transposed | |
Cmo17g00688 | Cmo-Chr17:7022461 | Cmo08g00748 | Cmo-Chr8:4733146 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00688 | K01530 | - | csv:101221220 | 2307.33 |