Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00697 ATGCCGTATTGGTGTTCTCAAACCTCTGAGTATCCATTTGATCTGTACAATCGCTACACTCTCTGCTTCGCTCTGATATCTCTCATTTTGGGGAAGAAGAGGAGGGATCCGATGAAATCTGCGGAAGTTTCCTATGAATTTGGGACTCTGATGGGGTTTCGATTACTGTTTCTACTGTTTGAAATTTGTTTTGCTGTTGGTTCTTTCTCTGTCTGTGAAGCTGCAGACCATGCTGTCACTCCGACATCTCATGTCTTTGGCAGGAAACACCATGGCAAGTCGGATAATGCTGTTCTTAGCAAACCATTTAAAGCTATTCAATCGGTTGATTCAAGTAGAGCTCCTAGCATTGCACTTCCACCTACCATGTCTGCTAAGAAATGGGGGCATGCTCATGCATTCTCACCATTCATCAATTTTCATAAACTACACCATTCAAGAAGGAAGTTCAGAAACAAACCTCCACAGCCTTCCTATCATGCATCGCCCCCGTCTGGCAGCCTGCAAGGCCCTGCTGCTGTATCTCCATCTTCAGCAAGAGGGAGGTCGCCCGGACCTGCACCATCTCCAACGATTCAACCCGACCACTATTATATGCCCATTCCAGCTCCTACAACTTCTCCTATGGGTTCTTACAAGAAGAAGAAGAGCATGCCACCATCACAAGCTATGATGCTACCACCTCCCCCTCCTAATGGGGATTGTACAATATTATGTACAGAGCCATTGACGTATACGCCTCCCGGGATGCCATGCGGTTGCGTGTGGCCAATTCAAGTCAAAATCAGCCTCGACGTTGCAGTATACACATTTTTCCCTCTGGTTTCAGAACTTGCAGAGGAAATTGCTGATTGTATCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCAAGTCAGCAGTTAGAAAAAACAACTGTTCTCATCAACTTGGTTCCAAGAAGATCAAGATTCGATCATAACACGGCCTTTTTTATATATCAGAAATTTTGGCGGAGAAAGGTATCAATCAAAGCTTCTTTGTTTGGTAGATATCAAGTACTAGATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTCAGCACCTTTAGGTACTTCATCCATTAATGATGGTTTGAACACCAGCAATACTAATGCAGGAAATGCAATTAAACCGTTGGGAGTCGACGTGCCGAGACGAAGAAAAGAAGGGCTTGGCAGGAACATGATTGTGGTGATTACTATATCATCGTTCACTGCCTTTGTCATGTGTGTTGGACTTGCTTGGGTTTGCCTGTTGAGATGCAGAGTGCCTGCACATCATCCAGCACAAGTTCCACACAACTTGATAGCCTCACCTGCAAAACCCCCAGGCACGGCTGGAAGTGAACAGGGTTCTTCGTCTTTGCCTCTCAACGACGATCCTATGACGTATATCGGGGCGGCAAAGCACTTCACCCTGAAAGACATGGAGAATGCCACTGATAACTTCGACTCTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCCGTTTAGATGATGGAAGGGAAGTGGCTGTGAAGGTTCTTAAAAGACATAATCAACATGGTATTCAGGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTAGTTAAGTTGATAGGAATTTGTACCGAAGATCGAAATCGTTGCCTGGTATACGAATTGGTTCCTAATGGAAGTGTTGAATCACACTTACATGGCATTGACAAGTTAATCAGTCCACTTGACTGGGATGCCCGCTTGAAGGTTGCCCTCGGTGCTGCTCGAGGCCTAGCCTATCTGCACGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGTTGGAATGTGACTTCACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACACATGTTATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACTGGCCACCTTCTTGTAAAGAGCGATGTCTACAGCTATGGTGTCGTCCTACTTGAGCTACTTACAGGAAGAAAGCCAGTAGACTTGTCGCTTCCTCCCGGACAAGAAAATCTCGTTGCTTGGGCTCGTCCGCTTCTCACGAGCAAGGAGGGGTTAGATGTAATAACAGACCCAGCTATTAAGTCTGATATCTCCATTGATAGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACCGGAAGTGTCTCATAGACCATTTATGGGTGAGGTTGTTCAAGCACTGAAACTCGTGTGCAGTGAGTTTGAGAATCTAACAGACCAGTTTCACGAAGTTACAGCCGAGACAAACTTGAAAGGAGATGAATGTAGGATTATCGGTATCGGGTTTGATCAAGGACAGGAACTGGTTTCTTCCAGATGGGCATTCATCAAACTTGAAACCATCGAGAACTGGAAGGAAAAAGCACCTGTGGCAGCAGCAAAGAAATTTGACATGGCTTTTCTGCTAAGTTTTGGCTTGGATTTCATTAGTTTATGTTCATCCATATCTTGCATTGCCAACTCTTGA 2586 44.93 MPYWCSQTSEYPFDLYNRYTLCFALISLILGKKRRDPMKSAEVSYEFGTLMGFRLLFLLFEICFAVGSFSVCEAADHAVTPTSHVFGRKHHGKSDNAVLSKPFKAIQSVDSSRAPSIALPPTMSAKKWGHAHAFSPFINFHKLHHSRRKFRNKPPQPSYHASPPSGSLQGPAAVSPSSARGRSPGPAPSPTIQPDHYYMPIPAPTTSPMGSYKKKKSMPPSQAMMLPPPPPNGDCTILCTEPLTYTPPGMPCGCVWPIQVKISLDVAVYTFFPLVSELAEEIADCISLNHSQVRIMGADAASQQLEKTTVLINLVPRRSRFDHNTAFFIYQKFWRRKVSIKASLFGRYQVLDVKYPGLPPSPPSAPLGTSSINDGLNTSNTNAGNAIKPLGVDVPRRRKEGLGRNMIVVITISSFTAFVMCVGLAWVCLLRCRVPAHHPAQVPHNLIASPAKPPGTAGSEQGSSSLPLNDDPMTYIGAAKHFTLKDMENATDNFDSARILGEGGFGIVYSGRLDDGREVAVKVLKRHNQHGIQEFLAEVEMLSRLHHRNLVKLIGICTEDRNRCLVYELVPNGSVESHLHGIDKLISPLDWDARLKVALGAARGLAYLHEDSNPRVIHRDFKASNILLECDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDVITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFENLTDQFHEVTAETNLKGDECRIIGIGFDQGQELVSSRWAFIKLETIENWKEKAPVAAAKKFDMAFLLSFGLDFISLCSSISCIANS 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7083257 7089042 + CmoCh17G006970.1 Cmo17g00697 401080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00697 861 MobiDBLite consensus disorder prediction 145 226 - -
Cmo17g00697 861 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Cmo17g00697 861 PANTHER OS01G0750732 PROTEIN 96 787 - -
Cmo17g00697 861 Gene3D Phosphorylase Kinase; domain 1 465 569 - -
Cmo17g00697 861 SUPERFAMILY Protein kinase-like (PK-like) 473 767 IPR011009 -
Cmo17g00697 861 ProSiteProfiles Protein kinase domain profile. 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo17g00697 861 Pfam Protein tyrosine and serine/threonine kinase 497 767 IPR001245 GO:0004672|GO:0006468
Cmo17g00697 861 CDD STKc_IRAK 500 768 - -
Cmo17g00697 861 Gene3D Transferase(Phosphotransferase) domain 1 570 791 - -
Cmo17g00697 861 MobiDBLite consensus disorder prediction 445 468 - -
Cmo17g00697 861 MobiDBLite consensus disorder prediction 162 176 - -
Cmo17g00697 861 PANTHER OS01G0750732 PROTEIN 96 787 - -
Cmo17g00697 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g00697 Cmo-Chr17:7083257 Cmo19g00148 Cmo-Chr19:815151 0 dispersed
Cmo10g00745 Cmo-Chr10:3433113 Cmo17g00697 Cmo-Chr17:7083257 0 wgd
Cmo11g00708 Cmo-Chr11:3418297 Cmo17g00697 Cmo-Chr17:7083257 0 wgd
Cmo17g00697 Cmo-Chr17:7083257 Cmo08g00740 Cmo-Chr8:4690171 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75010 PF07714 PK_Tyr_Ser-Thr 3.00E-47 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00697 - - csv:101219484 1250.73