Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00697 | ATGCCGTATTGGTGTTCTCAAACCTCTGAGTATCCATTTGATCTGTACAATCGCTACACTCTCTGCTTCGCTCTGATATCTCTCATTTTGGGGAAGAAGAGGAGGGATCCGATGAAATCTGCGGAAGTTTCCTATGAATTTGGGACTCTGATGGGGTTTCGATTACTGTTTCTACTGTTTGAAATTTGTTTTGCTGTTGGTTCTTTCTCTGTCTGTGAAGCTGCAGACCATGCTGTCACTCCGACATCTCATGTCTTTGGCAGGAAACACCATGGCAAGTCGGATAATGCTGTTCTTAGCAAACCATTTAAAGCTATTCAATCGGTTGATTCAAGTAGAGCTCCTAGCATTGCACTTCCACCTACCATGTCTGCTAAGAAATGGGGGCATGCTCATGCATTCTCACCATTCATCAATTTTCATAAACTACACCATTCAAGAAGGAAGTTCAGAAACAAACCTCCACAGCCTTCCTATCATGCATCGCCCCCGTCTGGCAGCCTGCAAGGCCCTGCTGCTGTATCTCCATCTTCAGCAAGAGGGAGGTCGCCCGGACCTGCACCATCTCCAACGATTCAACCCGACCACTATTATATGCCCATTCCAGCTCCTACAACTTCTCCTATGGGTTCTTACAAGAAGAAGAAGAGCATGCCACCATCACAAGCTATGATGCTACCACCTCCCCCTCCTAATGGGGATTGTACAATATTATGTACAGAGCCATTGACGTATACGCCTCCCGGGATGCCATGCGGTTGCGTGTGGCCAATTCAAGTCAAAATCAGCCTCGACGTTGCAGTATACACATTTTTCCCTCTGGTTTCAGAACTTGCAGAGGAAATTGCTGATTGTATCAGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCAAGTCAGCAGTTAGAAAAAACAACTGTTCTCATCAACTTGGTTCCAAGAAGATCAAGATTCGATCATAACACGGCCTTTTTTATATATCAGAAATTTTGGCGGAGAAAGGTATCAATCAAAGCTTCTTTGTTTGGTAGATATCAAGTACTAGATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTCAGCACCTTTAGGTACTTCATCCATTAATGATGGTTTGAACACCAGCAATACTAATGCAGGAAATGCAATTAAACCGTTGGGAGTCGACGTGCCGAGACGAAGAAAAGAAGGGCTTGGCAGGAACATGATTGTGGTGATTACTATATCATCGTTCACTGCCTTTGTCATGTGTGTTGGACTTGCTTGGGTTTGCCTGTTGAGATGCAGAGTGCCTGCACATCATCCAGCACAAGTTCCACACAACTTGATAGCCTCACCTGCAAAACCCCCAGGCACGGCTGGAAGTGAACAGGGTTCTTCGTCTTTGCCTCTCAACGACGATCCTATGACGTATATCGGGGCGGCAAAGCACTTCACCCTGAAAGACATGGAGAATGCCACTGATAACTTCGACTCTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCCGTTTAGATGATGGAAGGGAAGTGGCTGTGAAGGTTCTTAAAAGACATAATCAACATGGTATTCAGGAATTCTTGGCAGAAGTCGAGATGCTGAGTCGTCTACACCATAGAAATCTAGTTAAGTTGATAGGAATTTGTACCGAAGATCGAAATCGTTGCCTGGTATACGAATTGGTTCCTAATGGAAGTGTTGAATCACACTTACATGGCATTGACAAGTTAATCAGTCCACTTGACTGGGATGCCCGCTTGAAGGTTGCCCTCGGTGCTGCTCGAGGCCTAGCCTATCTGCACGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGTTGGAATGTGACTTCACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACACATGTTATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACTGGCCACCTTCTTGTAAAGAGCGATGTCTACAGCTATGGTGTCGTCCTACTTGAGCTACTTACAGGAAGAAAGCCAGTAGACTTGTCGCTTCCTCCCGGACAAGAAAATCTCGTTGCTTGGGCTCGTCCGCTTCTCACGAGCAAGGAGGGGTTAGATGTAATAACAGACCCAGCTATTAAGTCTGATATCTCCATTGATAGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACCGGAAGTGTCTCATAGACCATTTATGGGTGAGGTTGTTCAAGCACTGAAACTCGTGTGCAGTGAGTTTGAGAATCTAACAGACCAGTTTCACGAAGTTACAGCCGAGACAAACTTGAAAGGAGATGAATGTAGGATTATCGGTATCGGGTTTGATCAAGGACAGGAACTGGTTTCTTCCAGATGGGCATTCATCAAACTTGAAACCATCGAGAACTGGAAGGAAAAAGCACCTGTGGCAGCAGCAAAGAAATTTGACATGGCTTTTCTGCTAAGTTTTGGCTTGGATTTCATTAGTTTATGTTCATCCATATCTTGCATTGCCAACTCTTGA | 2586 | 44.93 | MPYWCSQTSEYPFDLYNRYTLCFALISLILGKKRRDPMKSAEVSYEFGTLMGFRLLFLLFEICFAVGSFSVCEAADHAVTPTSHVFGRKHHGKSDNAVLSKPFKAIQSVDSSRAPSIALPPTMSAKKWGHAHAFSPFINFHKLHHSRRKFRNKPPQPSYHASPPSGSLQGPAAVSPSSARGRSPGPAPSPTIQPDHYYMPIPAPTTSPMGSYKKKKSMPPSQAMMLPPPPPNGDCTILCTEPLTYTPPGMPCGCVWPIQVKISLDVAVYTFFPLVSELAEEIADCISLNHSQVRIMGADAASQQLEKTTVLINLVPRRSRFDHNTAFFIYQKFWRRKVSIKASLFGRYQVLDVKYPGLPPSPPSAPLGTSSINDGLNTSNTNAGNAIKPLGVDVPRRRKEGLGRNMIVVITISSFTAFVMCVGLAWVCLLRCRVPAHHPAQVPHNLIASPAKPPGTAGSEQGSSSLPLNDDPMTYIGAAKHFTLKDMENATDNFDSARILGEGGFGIVYSGRLDDGREVAVKVLKRHNQHGIQEFLAEVEMLSRLHHRNLVKLIGICTEDRNRCLVYELVPNGSVESHLHGIDKLISPLDWDARLKVALGAARGLAYLHEDSNPRVIHRDFKASNILLECDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDVITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEFENLTDQFHEVTAETNLKGDECRIIGIGFDQGQELVSSRWAFIKLETIENWKEKAPVAAAKKFDMAFLLSFGLDFISLCSSISCIANS | 861 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7083257 | 7089042 | + | CmoCh17G006970.1 | Cmo17g00697 | 401080 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00697 | 861 | MobiDBLite | consensus disorder prediction | 145 | 226 | - | - | |
Cmo17g00697 | 861 | ProSitePatterns | Protein kinases ATP-binding region signature. | 500 | 522 | IPR017441 | GO:0005524 | |
Cmo17g00697 | 861 | PANTHER | OS01G0750732 PROTEIN | 96 | 787 | - | - | |
Cmo17g00697 | 861 | Gene3D | Phosphorylase Kinase; domain 1 | 465 | 569 | - | - | |
Cmo17g00697 | 861 | SUPERFAMILY | Protein kinase-like (PK-like) | 473 | 767 | IPR011009 | - | |
Cmo17g00697 | 861 | ProSiteProfiles | Protein kinase domain profile. | 494 | 770 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo17g00697 | 861 | Pfam | Protein tyrosine and serine/threonine kinase | 497 | 767 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo17g00697 | 861 | CDD | STKc_IRAK | 500 | 768 | - | - | |
Cmo17g00697 | 861 | Gene3D | Transferase(Phosphotransferase) domain 1 | 570 | 791 | - | - | |
Cmo17g00697 | 861 | MobiDBLite | consensus disorder prediction | 445 | 468 | - | - | |
Cmo17g00697 | 861 | MobiDBLite | consensus disorder prediction | 162 | 176 | - | - | |
Cmo17g00697 | 861 | PANTHER | OS01G0750732 PROTEIN | 96 | 787 | - | - | |
Cmo17g00697 | 861 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 616 | 628 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo17g00697 | Cmo-Chr17:7083257 | Cmo19g00148 | Cmo-Chr19:815151 | 0 | dispersed | |
Cmo10g00745 | Cmo-Chr10:3433113 | Cmo17g00697 | Cmo-Chr17:7083257 | 0 | wgd | |
Cmo11g00708 | Cmo-Chr11:3418297 | Cmo17g00697 | Cmo-Chr17:7083257 | 0 | wgd | |
Cmo17g00697 | Cmo-Chr17:7083257 | Cmo08g00740 | Cmo-Chr8:4690171 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75010 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-47 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00697 | - | - | csv:101219484 | 1250.73 |