Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00705 ATGGACAGTTTCTGGGATGTTTTGGTACTGACAGCCATTTTTTTGACCATCATTCTTCTCTATAGGAACTGCTTTAGCCTTCTCAGATCAAAGCTCTGCAGCCACCTCCCTTTGGGTTCTCTTGGCTGGCCTTTCATTGGTGAAACGCTCGAGTTCATCGCTTGCGCTTATTCGGACCGCCCCGAAGCCTTCATGGACAAGCGTCGTCGCCTGTATGGGAAGGTGTTCAAGTCACATGTTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTTAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTGTTATCCCAAATCTTTGACGGAATTGATGGGGAAATCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGGATTCATGGTCTTGTAGGAGCTTTCTTCAAGTCTTCATATCTCAAAGCTCAAATAACTAAGGATATGGAGTGTTATGTCAAATTAGCTATGGCGAATTGGAGTGAGAACAGTCCTGTTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGGATGGAGTTTGTCAAGCAACAGTTCCAAGAATTCATCGCTGGGCTTATGGCTTTGCCAGTGAACATACCAGGCAGCAGGCTTTACCAATCGTTGCAGGCAAGTTGGATAGTAAAAGCTTTACCATCTTCCTTCACTATCACCATTTTCCTGATGGAGCTTCCTTTTATGCTTGAATTACAGGCCAAAAGGGCCATGGTTAAACTAGTTAAGAAGATCATACAAGAAAGAAGAAGCTGTGGAAGTTCCCCTGTGGCTGTCCCACAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAGTGAGCTACTAACAGATGATCTTATAGCAGAGAACATGATTGATATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTGATGACTCTTGCAGTAAAGTACCTCTCGGATTGCCCCGAGGCACTTCAACAGTTAACGGAGGAAAACTTGAATATGAAAAGGCTGAAAGAGCAGGCAGGAGAGGCATTGCATTGGAGCGATTACCTATCAATGCCATTTACACAGAATGTGATCACAGAGACACTAAGGATGGGAAACATCATAATTGGTGTCATGAGGAAGGCCATGAAAGACATGAACATAAAAGGATATCTAATACCCAAAGGCTGGTCGGTGCTTACTTACTTTAGATCCGTTCATCTTGATGACAGTCACTATCACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAATTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTCGTCACTCGCTTCAGGTCCCATGTTTCGTTTTCTTTTATTACGCTCATAGCAGCTCACTCCACTAAAACTAACCCCATAAATGGTACATTACACAGATGGGTAGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAACAGGATGCCAGTTTGGGTGAAGAAAAGAAAGGACCCATGA 1596 42.79 MDSFWDVLVLTAIFLTIILLYRNCFSLLRSKLCSHLPLGSLGWPFIGETLEFIACAYSDRPEAFMDKRRRLYGKVFKSHVFGSPTIVSTDAEVSKFILQSDAKAFVPCYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSYLKAQITKDMECYVKLAMANWSENSPVYLQDETKNISFQVLVKILISLNPGQRMEFVKQQFQEFIAGLMALPVNIPGSRLYQSLQASWIVKALPSSFTITIFLMELPFMLELQAKRAMVKLVKKIIQERRSCGSSPVAVPQDVMEVLLKDESELLTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPEALQQLTEENLNMKRLKEQAGEALHWSDYLSMPFTQNVITETLRMGNIIIGVMRKAMKDMNIKGYLIPKGWSVLTYFRSVHLDDSHYHCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTRFRSHVSFSFITLIAAHSTKTNPINGTLHRWVAEEDRIINFPTVRMKNRMPVWVKKRKDP 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7126644 7131409 + CmoCh17G007050.1 Cmo17g00705 401088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00705 531 Coils Coil 333 357 - -
Cmo17g00705 531 Gene3D Cytochrome P450 29 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00705 531 Pfam Cytochrome P450 37 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00705 531 SUPERFAMILY Cytochrome P450 36 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00705 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Cmo17g00705 531 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00705 531 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00705 531 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00705 531 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00705 531 PANTHER CYTOCHROME P450 26 17 522 - -
Cmo17g00705 531 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 17 522 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00159 Cmo-Chr4:827053 Cmo17g00705 Cmo-Chr17:7126644 3.65E-15 dispersed
Cmo16g01056 Cmo-Chr16:7421563 Cmo17g00705 Cmo-Chr17:7126644 5.66E-83 dispersed
Cmo17g00705 Cmo-Chr17:7126644 Cmo01g01899 Cmo-Chr1:13671091 2.20E-76 dispersed
Cmo07g00457 Cmo-Chr7:2092142 Cmo17g00705 Cmo-Chr17:7126644 6.48E-176 transposed
Cmo14g01302 Cmo-Chr14:10888100 Cmo17g00705 Cmo-Chr17:7126644 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00705 K12638 - csv:101217830 799.275