Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00721 ATGAAGATAATGGAATTATCAGGGTTCCATTCCCTCTTTGGTTTTCTGCTATGTGGTCTAACTCTTCTATTGCTTGTTCAAGCTCAGGATCAGTCAGGCTTCATTAGTTTAGACTGTGGAACACCAGAGAGTACAAGTTACACCGAAACGACAACCAAGATCAACTACGTTTCTGATGCACCCTTCATAAACAGTGGTGTAAGTGGAAGTGTAGCTTCGATTTATGGAGATACCTACCAAAGGCAAATGAGGAAACTTAGAAGCTTCCCCGAAGGAATCAGAAATTGTTACAATGTAAGCGTTAAAAAGGATACCAAATACTTGATTCGAGCAAATTTCTTGTACGGAAACTACGATGGCCTGAACTTGCTACCGCAGTTTGACCTCTATATTGGGAATAGCTTATGGGAAACGATAAACTTCACCAAAGCTGGCATTGACACTTTCAAAGATCTCATACATGTTACCTCCTCAAAGGAAGTTCACATCTGTCTGATCAATACAGGAAATGGGGTACCATTCATCTCAGCCTTGGAATTTAGACCTTTACTCAACATTACTTATCAAACAGTGTCAGGATCCTTATCACTGTATACTCGATTGGACATTGGTTCCACAAACAATCAAACATACAGGTTCCCTTTTGATGTTTATGATCGCCTCTGGTCACCATTTAACTTCAATGAGTGGACACAAGTGAGCACCAATCAAACTGTAGATGCTACTGATCACAACAATCACCAACCGCCCTCCGTTGTCATGAAAACTGCTTCCACCCCAATAAATGCAAGCAAACCACTGGAAATTTGGTGGGATACCGTAGATTCATCTCAATATTATGTATTTATCCACTTTGCTGAAGTTGTGGAGCTTAGGGGCAACCAGAGTAGAGGATTCAATATCATGCACAATGGGGATCATTTTTATGGACCTCTAATTCCAAGTTATTTATCCACACTGACCGTTTACAGTCGAGAACAATTGGATGCAGCAGATAGACATACATTTTCTTTAGTTCCAATTGAGAATGCAACACTTCCTCCAATCATTAATGCTTTCGAGATATATACAGTGAAGGATATATCAGAGTTAGCATCAGATAAAGGAGATGTGGATGCAATTACCAATATCAAGTCAACCTATGGGGTAAAGAAGGATTGGCAAGGAGATCCATGTGTGCCGATGAGATACCCCTGGAGTGGGTTAAATTGTAGCAATGAAGCTGCACCAAGAATCACATCCTTGAACTTGTCTACAAGTGGACTGAATGGTGAAATATCTTCTTACATATCCAGTCTAACAATGTTGCAAACTTTGGACTTGTCAAACAATAATTTGACAGGGAAGGTGCCTGATTTCCTGTCTAGTTTGTTGCACCTCAAAATTCTGAACCTAGGTAACAATAACCTCTCAGGTCCAATACCGGCTGATCTTTTGAAAAGATCCAATGATGGCTCACTATCATTAAGTGTGGGAGGAAACCAAAATCTCGATGCATGTACATCAGATCCATGTCCAAAGAATGAAAAGAAAAACAACATCATCATTCCAATTGTAGCATCAATTGGCGGAGTCCTAGTTATCGTCACAATTGGTGCAATAACCTTTTGGATCATCAAATCTCGAAAGAAACCACAAGGTAAAAATGTTGTCTCAGTAGTGGATAAGTCAGAAACCAACAGTCAATTTGGTAATTCATTGGAGGTGAGAAGACAACAATTTACATATTCTGAGGTGGTGAAAATGACCAACAATTTCACAAGAGTTCTGGGTAAAGGAGGTTTTGGGGAGGTCTATTATGGTGTCATTGACGACATTCAAGTGGCAGTGAAGATGTTGTCTTTGTCATCATCACAAGGGTATCGGCAATTTCAAGCAGAGGTTACCCTTCTTATGAGAGTTCACCATAGAAACTTGACAAGCCTTGTTGGATATTTGAATGAAGGAAACCACCTGGGCCTCATTTACGAGTACATGGCCAATGGAGATTTAGCAGAACACCTTTCAGAGAGGAGTCCAAGTATCCTAAGCTGGGAAGATAGACTTCGAATAGCAATGGATGCAGCTCAAGGACTGGAGTACCTGCATTACGGTTGTAAGCCACCAATAGTTCACAGAGATGTGAAAACAACAAACATCTTGTTGACAGATAATTTCCAAGGCAAACTTGCCGATTTCGGTCTTTCCAAAAGCTTTCCCATAGATGGCAACACCCACATGTCCACGGTTGTCGCTGGCACACCTGGTTACCTCGATCCAGAGTACTACGTATCAAACAGACTAACAGAGAAAAGCGATGTATACAGCTTTGGGATAGCTCTATTAGAGATAATCAGTTGCAAACCAGTAATATCAAGAACCGGAGTTACACCACATATAGCTAAATGGGCTACATCTTTGCTGGCACAAGGAGATATTCAGAGCATTGTTGATCCAAGATTACAAGGTCAATATGACACTAACTCTGTTTGGAAGACGGCGGAAGTGGCAATGGCTTGTGTAGCGGCAAATTCCAGTAGAAGGCCAACGATGAACGACGTTGTGGCAGAACTCAAAGATTGCTTAGCCATGGAATTGAGTCGAAAGATTGAGAATCGTTCGCTTGTTTCAATAAATTCCATCCAATCGAGGCCCATCTCCACTGTGGGGTTCAGTGGTACCGATTCTGGTCCCATGGCGAGGTGA 2685 41.34 MKIMELSGFHSLFGFLLCGLTLLLLVQAQDQSGFISLDCGTPESTSYTETTTKINYVSDAPFINSGVSGSVASIYGDTYQRQMRKLRSFPEGIRNCYNVSVKKDTKYLIRANFLYGNYDGLNLLPQFDLYIGNSLWETINFTKAGIDTFKDLIHVTSSKEVHICLINTGNGVPFISALEFRPLLNITYQTVSGSLSLYTRLDIGSTNNQTYRFPFDVYDRLWSPFNFNEWTQVSTNQTVDATDHNNHQPPSVVMKTASTPINASKPLEIWWDTVDSSQYYVFIHFAEVVELRGNQSRGFNIMHNGDHFYGPLIPSYLSTLTVYSREQLDAADRHTFSLVPIENATLPPIINAFEIYTVKDISELASDKGDVDAITNIKSTYGVKKDWQGDPCVPMRYPWSGLNCSNEAAPRITSLNLSTSGLNGEISSYISSLTMLQTLDLSNNNLTGKVPDFLSSLLHLKILNLGNNNLSGPIPADLLKRSNDGSLSLSVGGNQNLDACTSDPCPKNEKKNNIIIPIVASIGGVLVIVTIGAITFWIIKSRKKPQGKNVVSVVDKSETNSQFGNSLEVRRQQFTYSEVVKMTNNFTRVLGKGGFGEVYYGVIDDIQVAVKMLSLSSSQGYRQFQAEVTLLMRVHHRNLTSLVGYLNEGNHLGLIYEYMANGDLAEHLSERSPSILSWEDRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTDNFQGKLADFGLSKSFPIDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALLEIISCKPVISRTGVTPHIAKWATSLLAQGDIQSIVDPRLQGQYDTNSVWKTAEVAMACVAANSSRRPTMNDVVAELKDCLAMELSRKIENRSLVSINSIQSRPISTVGFSGTDSGPMAR 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7232878 7237363 - CmoCh17G007210.1 Cmo17g00721 401104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00721 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Cmo17g00721 894 SUPERFAMILY L domain-like 395 483 - -
Cmo17g00721 894 SUPERFAMILY Protein kinase-like (PK-like) 564 851 IPR011009 -
Cmo17g00721 894 Pfam Malectin-like domain 37 358 IPR024788 -
Cmo17g00721 894 ProSitePatterns Protein kinases ATP-binding region signature. 590 611 IPR017441 GO:0005524
Cmo17g00721 894 ProSiteProfiles Protein kinase domain profile. 584 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo17g00721 894 Gene3D Ribonuclease Inhibitor 371 490 IPR032675 -
Cmo17g00721 894 ProSiteProfiles Leucine-rich repeat profile. 435 457 IPR001611 GO:0005515
Cmo17g00721 894 PANTHER PUTATIVE-RELATED 17 894 - -
Cmo17g00721 894 Gene3D Phosphorylase Kinase; domain 1 571 658 - -
Cmo17g00721 894 Gene3D Transferase(Phosphotransferase) domain 1 659 874 - -
Cmo17g00721 894 SMART serkin_6 584 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo17g00721 894 PANTHER OS07G0107800 PROTEIN-RELATED 17 894 - -
Cmo17g00721 894 Pfam Protein tyrosine and serine/threonine kinase 586 851 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00714 Cmo-Chr8:4494837 Cmo17g00721 Cmo-Chr17:7232878 0 dispersed
Cmo08g00715 Cmo-Chr8:4503526 Cmo17g00721 Cmo-Chr17:7232878 0 dispersed
Cmo08g00717 Cmo-Chr8:4515270 Cmo17g00721 Cmo-Chr17:7232878 0 dispersed
Cmo14g01316 Cmo-Chr14:10995016 Cmo17g00721 Cmo-Chr17:7232878 0 dispersed
Cmo14g01317 Cmo-Chr14:11002597 Cmo17g00721 Cmo-Chr17:7232878 2.11E-92 dispersed
Cmo17g00718 Cmo-Chr17:7219875 Cmo17g00721 Cmo-Chr17:7232878 0 dispersed
Cmo17g00726 Cmo-Chr17:7259312 Cmo17g00721 Cmo-Chr17:7232878 1.10E-177 dispersed
Cmo17g00719 Cmo-Chr17:7230475 Cmo17g00721 Cmo-Chr17:7232878 3.78E-27 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75013 PF12819 Malectin_like 2.80E-111 CL0202 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00721 - - csv:101206211 1485.7