Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00772 | ATGAACTCCGACAACAATCGAGCTGCTCTTGTAACGGATTTTTGGCCGGAGTTCGTTGCAAGCAGTTGGGGTAAAGAATTTGTCGCCGGCGGGTTCGGTGGCGTCGCCGGCGTTATCTCCGGCCACCCACTAGATACTCTTCGTATCAGGCAACAACAATCCGTTTCTGGGTCTGCTTTCAAAATTTTTCGTAATATCATTGCTAATGATGGCCCCGTCGGTCTTTATAGAGGCATGTCTGCTCCATTCGCCTCTATCACTTTTCAGAACGCGGCCGTGTTTCAAATCTACGCGATTCTTTCTCGAGCATTCACCTCCTCGTCGGCTCAATCCAACGGCGACCCACCAAGCTACAAGGCAGTAGCAATGGGAGGATTTGGCACCGGAGCACTACAGAGCTTCTTCCTAACGCCGGTGGAGCTGGTGAAGATCCGCCTACAATTACAGACATCAACCCAACAACCAATTTCTTCTTCATCATCATCTCACAAAGGCCCATTAAGCGTCGCCAAAAGCATCTACAAAACAGAGGGATTAAGAGGCATTTACAGAGGACTTACCATAACCATGCTCCGAGACGCCCCTGCCCATGCCGTCTATTTCTGGACCTATGAGTGCATGAGGGAGCAGTTTCAACCCGGCTGCCGGAGCTCCGGGGAAGAGAGATTCAGCACGGCGTTGGTCGCCGGAGGGCTCGCCGGAGTTGCCAGCTGGGTTTTTTGTTATCCGTTGGATGTGTTGAAGACAAGAATTCAAGCTCCGACACAAAGGTTGTCGCCGAGGTATAAGGGAATTGTGGATTGTGTTAGCAAGAGTGTTAGGGAAGAGGGTTATAGAGTGCTGTGGCGAGGCCTGGAGACGGCTGTTGCTAGAGCTTTTGTGGTGAATGGGGCCATTTTTAGTGCTTATGGGTTAACTTTGAGGTGTTTATTTAGTAATGGAAGCAATTAG | 951 | 50.26 | MNSDNNRAALVTDFWPEFVASSWGKEFVAGGFGGVAGVISGHPLDTLRIRQQQSVSGSAFKIFRNIIANDGPVGLYRGMSAPFASITFQNAAVFQIYAILSRAFTSSSAQSNGDPPSYKAVAMGGFGTGALQSFFLTPVELVKIRLQLQTSTQQPISSSSSSHKGPLSVAKSIYKTEGLRGIYRGLTITMLRDAPAHAVYFWTYECMREQFQPGCRSSGEERFSTALVAGGLAGVASWVFCYPLDVLKTRIQAPTQRLSPRYKGIVDCVSKSVREEGYRVLWRGLETAVARAFVVNGAIFSAYGLTLRCLFSNGSN | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7488183 | 7490445 | - | CmoCh17G007720.1 | Cmo17g00772 | 401155 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00772 | 316 | PRINTS | Mitochondrial carrier protein signature | 26 | 39 | IPR002067 | GO:0055085 | |
Cmo17g00772 | 316 | PRINTS | Mitochondrial carrier protein signature | 131 | 149 | IPR002067 | GO:0055085 | |
Cmo17g00772 | 316 | PRINTS | Mitochondrial carrier protein signature | 183 | 201 | IPR002067 | GO:0055085 | |
Cmo17g00772 | 316 | PRINTS | Mitochondrial carrier protein signature | 230 | 252 | IPR002067 | GO:0055085 | |
Cmo17g00772 | 316 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 116 | 210 | IPR018108 | - | |
Cmo17g00772 | 316 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 221 | 309 | IPR018108 | - | |
Cmo17g00772 | 316 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 13 | 312 | - | - | |
Cmo17g00772 | 316 | Pfam | Mitochondrial carrier protein | 222 | 312 | IPR018108 | - | |
Cmo17g00772 | 316 | Pfam | Mitochondrial carrier protein | 22 | 106 | IPR018108 | - | |
Cmo17g00772 | 316 | Pfam | Mitochondrial carrier protein | 123 | 212 | IPR018108 | - | |
Cmo17g00772 | 316 | PANTHER | CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN | 13 | 312 | - | - | |
Cmo17g00772 | 316 | SUPERFAMILY | Mitochondrial carrier | 22 | 303 | IPR023395 | - | |
Cmo17g00772 | 316 | Gene3D | Mitochondrial carrier domain | 122 | 315 | IPR023395 | - | |
Cmo17g00772 | 316 | Gene3D | Mitochondrial carrier domain | 9 | 121 | IPR023395 | - | |
Cmo17g00772 | 316 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 24 | 103 | IPR018108 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo14g01344 | Cmo17g00772 | CCT | |
Cmo01g00116 | Cmo17g00772 | CCT | |
Cmo08g00656 | Cmo17g00772 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00661 | Cmo-Chr6:3329251 | Cmo17g00772 | Cmo-Chr17:7488183 | 8.48E-10 | dispersed | |
Cmo16g01204 | Cmo-Chr16:8616424 | Cmo17g00772 | Cmo-Chr17:7488183 | 3.48E-48 | dispersed | |
Cmo17g00772 | Cmo-Chr17:7488183 | Cmo19g00255 | Cmo-Chr19:1855240 | 9.23E-11 | dispersed | |
Cmo01g00116 | Cmo-Chr1:510705 | Cmo17g00772 | Cmo-Chr17:7488183 | 3.78E-142 | wgd | |
Cmo14g01344 | Cmo-Chr14:11179878 | Cmo17g00772 | Cmo-Chr17:7488183 | 3.67E-145 | wgd | |
Cmo17g00772 | Cmo-Chr17:7488183 | Cmo08g00656 | Cmo-Chr8:4258204 | 7.68E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00772 | K15109 | - | csv:101222165 | 474.167 |