Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00865 | ATGCCGGTCGACGGTTCTTCAACCACCGCCCCCACCGTTTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATAGTTAAGCTTCTTCTCCAGAAAGGCTATATCGTGAGAGGAACCGTCAGAAATCCAGAGGACCCGAAGAACGGCCATTTGAAAGAATTTGAAGGCGCGGCGGAGCGATTCAGTTTGTATAAAGCCGATCTTCTCGATTTCGAGAGCCTTAGGGCGGCGATTAACGGATGCGATGGCGTTTTCCACACGGCGTCGCCTGTAACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTCAATGGCACGAAGAATGTTATAATCGCGGCGGCCGAAGCCAAAGTCCGTCGCGTGGTTTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGAGATCGTAGACGAGTCCTGCTGGAGCGATCTAGAGTTCTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAAGCTGTGGCGGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAGGAAGTGGACTTGGTGGTGGTGAATCCGGTGCTGGTGCTGGGCCCACTGTTGCAACCCACCATTAATGCCAGCATTATCCACATACTCAAGTACTTGACTGGATCAGCTAAGACGTACGCCAATTCCGTTCAGGCGTACGTCCACGTGAAGGATGTTGCTCTTGCACATATCCTCGTGTACGAGAATCCCTCCGCCTCCGGCCGGTACCTCTGCGCCGAGAGTGTTCTCCACAGAGGGGAGATCGTTGAGATTCTTGCCAAATTGTTCCCGGAATACCCTGTTCCCACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAAATTCTCAAACCAGAAGCTGAAGGACTTAGGATTGGAGTTCACTCCAGTGAAGCAGTGTCTATATGAAACCGTTAAGAACTTACAGGAGAAAGGTCATCTCCCGACCCCCACTTCTACTCAACCAGCAGACTCCATTCGAATTCAATCTTAA | 1017 | 52.51 | MPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAERFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKEVDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYENPSASGRYLCAESVLHRGEIVEILAKLFPEYPVPTKCSDEVNPRKKAYKFSNQKLKDLGLEFTPVKQCLYETVKNLQEKGHLPTPTSTQPADSIRIQS | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7944762 | 7948285 | + | CmoCh17G008650.1 | Cmo17g00865 | 401248 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00865 | 338 | Gene3D | - | 4 | 337 | - | - | |
Cmo17g00865 | 338 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 244 | IPR001509 | - | |
Cmo17g00865 | 338 | PANTHER | CINNAMOYL-COA REDUCTASE-LIKE PROTEIN | 8 | 326 | - | - | |
Cmo17g00865 | 338 | MobiDBLite | consensus disorder prediction | 319 | 338 | - | - | |
Cmo17g00865 | 338 | CDD | FR_SDR_e | 13 | 300 | - | - | |
Cmo17g00865 | 338 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 11 | 316 | IPR036291 | - | |
Cmo17g00865 | 338 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 8 | 326 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g01075 | Cmo-Chr14:5965793 | Cmo17g00865 | Cmo-Chr17:7944762 | 0 | dispersed | |
Cmo14g01076 | Cmo-Chr14:5989799 | Cmo17g00865 | Cmo-Chr17:7944762 | 0 | dispersed | |
Cmo17g00865 | Cmo-Chr17:7944762 | Cmo18g01034 | Cmo-Chr18:11105165 | 7.87E-80 | dispersed | |
Cmo01g00189 | Cmo-Chr1:822203 | Cmo17g00865 | Cmo-Chr17:7944762 | 1.42E-160 | wgd | |
Cmo14g01074 | Cmo-Chr14:5943038 | Cmo17g00865 | Cmo-Chr17:7944762 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00865 | K09753 | - | csv:101213412 | 614.379 |