Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00927 | ATGTGCAAGGCACGTGCCTTTTCTCCCACCAGCTCATCCTCGAGTATTCAATTTGCGAAAATTTGTTCCCTTAAGTATTGTGTCGTCACCTTGGCTTTTCGCTTCAGTCCTTCGTCAATTGGGAAATTAGGGTTTACTTTTCCTTCTCGTGAAATGGCTATGGCTGGGCGTATCAGATCGATCATCCCTGTATTCAATCAGATTCTGAAATCGGAGTCACGGACTCAGAGACCTGCTCTTCAAAGAGCCCTACTTTGCCCCACGACTGCCAACTCCGAGTTCTCGAGGAACTATGCAACTGCTTCCAGTAAAAGTGAGGTCAAAGTTAAGGTTCCTCTGTCTTTGTTTGGGGGGTCTGGAAACTATGCCTCTGCTTTGTACATTGCAGCAGTAAAAGCTAATTCCTTGGATAAGGTTGAGACAGAGCTTTTTGACCTTGTTGAGGCTTCACAGAGAAGTGCCACCTTTTCTCAGTTCATGAGAGATCCCTCTGTCCCTGCAGATACTAGGGTCAAGGCTATTACTGATATTTGCACAGCTGCTAAATTTTCAGAAGTTACAAAAAACTTTTTGGTTGTACTGTCTGAATATGGAAGGCTGAAATACATAGACAGCATTGCAACGAAGTTTCAGGAGTTGACAATGGCTCATAGAGGAGAGGTGAAGGCCATTGTGACTACAGTTATTCCCCTCCCTGCTGAAGAAGAGAAAGAACTGAAAGAGACCCTGCAGGATATTATCGGACAGGGGAAAAAGGTCATCCTTGAACAGAAGGTTGATCCAAGTATTCTCGGCGGGCTAGTCGTAGAATTTAGCGAAAAACTGTTGGACGTGTCCATTAAGACCAGAGCAGAACAGATGGAGAGGTTCTTGCGAGAACCTGGGAGCCTCGACAACCTCTGA | 903 | 45.4 | MCKARAFSPTSSSSSIQFAKICSLKYCVVTLAFRFSPSSIGKLGFTFPSREMAMAGRIRSIIPVFNQILKSESRTQRPALQRALLCPTTANSEFSRNYATASSKSEVKVKVPLSLFGGSGNYASALYIAAVKANSLDKVETELFDLVEASQRSATFSQFMRDPSVPADTRVKAITDICTAAKFSEVTKNFLVVLSEYGRLKYIDSIATKFQELTMAHRGEVKAIVTTVIPLPAEEEKELKETLQDIIGQGKKVILEQKVDPSILGGLVVEFSEKLLDVSIKTRAEQMERFLREPGSLDNL | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8264452 | 8269691 | + | CmoCh17G009270.1 | Cmo17g00927 | 401310 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00927 | 300 | Pfam | ATP synthase delta (OSCP) subunit | 120 | 289 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | PANTHER | ATP SYNTHASE DELTA CHAIN | 86 | 293 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | Gene3D | - | 118 | 211 | IPR026015 | - | |
Cmo17g00927 | 300 | PANTHER | ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL | 86 | 293 | - | - | |
Cmo17g00927 | 300 | TIGRFAM | ATP_synt_delta: ATP synthase F1, delta subunit | 121 | 290 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | Hamap | ATP synthase subunit delta [atpD]. | 114 | 293 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | PRINTS | ATP synthase delta subunit signature | 199 | 213 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | PRINTS | ATP synthase delta subunit signature | 188 | 199 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | PRINTS | ATP synthase delta subunit signature | 251 | 266 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | PRINTS | ATP synthase delta subunit signature | 118 | 137 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | PRINTS | ATP synthase delta subunit signature | 266 | 284 | IPR000711 | GO:0015986|GO:0046933 | |
Cmo17g00927 | 300 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 119 | 220 | IPR026015 | - | |
Cmo17g00927 | 300 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 253 | 272 | IPR020781 | GO:0015986|GO:0016020|GO:0046933 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo14g01022 | Cmo17g00927 | CCT | |
Cmo01g00234 | Cmo17g00927 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo09g01238 | Cmo-Chr9:10615482 | Cmo17g00927 | Cmo-Chr17:8264452 | 2.53E-12 | dispersed | |
Cmo01g00234 | Cmo-Chr1:1052110 | Cmo17g00927 | Cmo-Chr17:8264452 | 1.25E-109 | wgd | |
Cmo14g01022 | Cmo-Chr14:5566786 | Cmo17g00927 | Cmo-Chr17:8264452 | 1.17E-107 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00927 | K02137 | - | csv:101206351 | 368.237 |