Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00955 ATGTTTTCCCATGCAATTCCATTCCTTCATCACAAACCTATGATGGATTCCGGCAACCTCTCCTCCTCCTCCGCCCTGCCCGCTTTGGTTTCCGCTGGAAACTTTGGGCTCTGGCCGCTCCTTGACTTCCAAATCTTGGAGATCTCTTTCGCTCTTTTCGTGTTCTTGGCCATCCATGTCGTTAGACAACAACGACGATATGGCTTGCCTGTTTGGCCGATCGTTGGAATGTTACCATCTCTGATCACAGCAGCACGTGGGAATCTCTACGAATGGATTACTGACCTCCTCCGTCATCATAAGGGTACGTTTCAATTTCGAGGCCCGTGGTTTAGTAGTCTCAATTGTGTAGTCACTGCTGATCCCCGAAACTTGGAGCACCTTCTCAAGACCAAATTTCCTTCCTACCCTAAAGGGCCATTCTTCCGCGACACGGTGAGAGACCTTCTCGGTGATGGAATATTCGGGGCTGACGATGAGACGTGGCAACGACAGAGGAAGGTGGCCAGCATTGAGTTTCACTCGGCGAGGTTCCGACAGATGACGGTGGAGTCGCTGGTGGAGCTCGTGCACTCGAGGTTGGAAACAGTGTTGGAGGATTTCCTGGGACGGAGGACGGCGGTGGACCTGCAGGATGTTCTTCTGAGATTGACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCCGGCTGCTTGCGCGGCGGCTTGCCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCGACTGAAGTCACTGTTCTACGCTTCATCACACCTACGTTCGTATGGAAAATCTTGAGGTACCTGAACTTGGGAGTGGAGAAGAAGCTGAAGCAATCGATACAAGCCGTCGACGAATTTGCAGAGGACGTGATTCAAACACGGAAGAGAGAACTCTCCACGACGGCGCAACCGCAAGCCGAGAACCAAAGATCCGACCTATTAACCGTATTTATGAGGCTAAGAGACGAGCAACGGCGGCCATTCTCCGACAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTCGCCGGAAGAGACACGTCTTCCGTCGCATTGAGTTGGTTCTTCTGGTTGCTCGATCGAAATCCCGACGTGGAGGACAAAATTCTAGCAGAAATTTACAGAATCGTCGGCGAACGAGAAGAGGCCAAAACCAGAGAGTTCCGATTTGATTCGTTAGTGTTCAAACCAGAGGAAATCAAGAAAATGGAGTATTTGCACGCGGCGATTTCCGAAGCCCTAAGATTATATCCATCAGTTCCAGTCGATCACAAAGAGGTCGTGGAGGACGATGTATTCCCAGACGGAACGATTCTGAAGAAAGGAACAAAAATCATCTACGCTATATACGCGATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAAAGACGGTCGGTTCATGAGCGAATCAGCGTATCGATTCACCGCCTTCAACGGCGGTCCTCGGCTGTGTCTGGGAAGGGATTTCGCGTACTATCAAATGAAATACGTCGCCGCCTCGATCATCAGCCGGTACCGGGTGGCGGTGGTGAAGGGGCATCCGGTGGAGCCGAAGCTTGCCCTAACTTTCTACATGAAGGACGGCTTGAAGGTCAATTTGATCAAACGAGAAGAGGGGCAGATTCGGAAATACGTGAAGCTAAATTGA 1689 50.33 MFSHAIPFLHHKPMMDSGNLSSSSALPALVSAGNFGLWPLLDFQILEISFALFVFLAIHVVRQQRRYGLPVWPIVGMLPSLITAARGNLYEWITDLLRHHKGTFQFRGPWFSSLNCVVTADPRNLEHLLKTKFPSYPKGPFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLETVLEDFLGRRTAVDLQDVLLRLTFDNVCMIAFGVDPGCLRGGLPEIPFAKAFEDATEVTVLRFITPTFVWKILRYLNLGVEKKLKQSIQAVDEFAEDVIQTRKRELSTTAQPQAENQRSDLLTVFMRLRDEQRRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDRNPDVEDKILAEIYRIVGEREEAKTREFRFDSLVFKPEEIKKMEYLHAAISEALRLYPSVPVDHKEVVEDDVFPDGTILKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMKDGRFMSESAYRFTAFNGGPRLCLGRDFAYYQMKYVAASIISRYRVAVVKGHPVEPKLALTFYMKDGLKVNLIKREEGQIRKYVKLN 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8434822 8436762 + CmoCh17G009550.1 Cmo17g00955 401338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00955 562 Gene3D Cytochrome P450 67 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PANTHER CYTOCHROME P450 86B1-LIKE 33 551 - -
Cmo17g00955 562 Pfam Cytochrome P450 69 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PANTHER CYTOCHROME P450 33 551 - -
Cmo17g00955 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
Cmo17g00955 562 SUPERFAMILY Cytochrome P450 68 550 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00955 562 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01299 Cmo-Chr15:8915667 Cmo17g00955 Cmo-Chr17:8434822 5.14E-154 dispersed
Cmo17g00415 Cmo-Chr17:2771360 Cmo17g00955 Cmo-Chr17:8434822 3.19E-150 dispersed
Cmo07g00781 Cmo-Chr7:3536472 Cmo17g00955 Cmo-Chr17:8434822 1.40E-111 transposed
Cmo14g00504 Cmo-Chr14:2496929 Cmo17g00955 Cmo-Chr17:8434822 3.81E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00955 K15402 - csv:101212202 1008.82