Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00973 | ATGGATGATAGCTGTGCGGTGTGTGCCGATGCCCTTGAATGGGTTGCCTATGGCTCTTGCGGCCATCGGGATGTTTGCTCCACCTGCGTTGCTCGCCTTCGATTCATTTGCGGTGATCGCTGTTGTTGCATCTGCAAGTCCGAATCCACCGTCGTCTTCGTCACTAAGGCCTTAGGAGATTATACAAGGACTATTAACGACTTCACAGTCTTTCCTTCTGAACCTAGAGAAGGTCGTTGTGGATCCTATTGGTATCATGAAGACACGCAAGCATTTTTTGATGACGTTGACCACTACAAGATGATAAAAGCAATGTGCAGGTTGTCATGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGGCTCAAAGCGCCGAGGAAGATTTCGGAATATTGAACAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGAAGGAAGATTTTTATTTGTGAACAAAAGCTGTATAATAGAGCACAACTGAATCAGCACATACACACTGGTGACTCTGAGGTGGACGGAAGTGAGAGTGAGAGAGGTGGTTTCACCGGACACCCAATGTGTGAGTATTGCAGGACTCCTTTTTACGGAGATAATGAGCTGTATACTCATATGTCAACAGAACATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTATGAATATTATAAGAATTATGATGACCTGGAGATCCATTTCCGACAAGCACATTTTCTTTGTGAAGATGAAACCTGCCTTTCTAAGAAGTTTATAGTGTTCCAATCTGAATCAGAAATGAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAATGACCAAGATAATCGCCGTGGTAGACGAACATTTCGTCGTGATTCTTCTGACGACCTACTTTCTGTAGCCATTCAAGAAAGCTTTGAAACAGCCAATGTTGATGACACCACTCATGACCCACTACCTAGCGGTCAAGTAGACTCAGATCAGGGAAATATAAGCAACATTGATCCCTTAATTGAACCATTTGAATCATTATCCACAACAGATGCTGAATCAGCTTCTAGATACCTTCAAGCATTGGGTCATTCTAGGAATTCCCAATTGGAGCAATCATCCTTTCCACCCCTTTCAACAGCATCTAGCAGTAGTCATCCAAAACCCATTCAGGACAAAGATAATAACAGTATGGCTGCTCATCTTCGCCGCAAGAGGAATGTGACCGTAATAAATCCTGCCCAAGGTTGGCCAAAATCAAGTCGTGCGCCTGTGGTACCATCAAATAAATCCTCTCAAGCTTGGCCTGCAATAAATGTCAATCATACGGCATCGAGCAGTTCTGGGCAGACTAAGGGTGCTGTGACCATCAGTAATGGCTCTTCGGGCTCTGGTTACTCAAATGCTGCTCAGATGCATGTGAAGGGTAAGACTAGTTCTTCGAGTGGATCGGGTAGTAGTAGCAGTAGGATCAGCCACTCTGCTTCTGCTCCCAATCTCACCGACATGGCTTATACTGAACCCTCGGTTAATGATTTCCCTCCTGTATCTGCGGCACAGGCACGGAAGGTGCCCTCAAGTAGCCAGAGTTCGATGAACACGGAAGATGTCCAGACAGCAAACAAATCTCTAGTTGAAAAGATACGTGCTGCACTTGATTTTGACCAAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAAGGTCAGATCGACCCGGAAATGTACCTAGACTGTGTGCAGCAGTTCGGTTTGTCACATCTTGTGCTTGAACTGGCTAGGCTGTGTCCTGATGCTCAGAAACAGAAAGAACTTGTGGGGATCTATAATGCTAGTTTACAGAAAGAAGTGATCCAAGAAAATGGTAGGGCTCAAGATAGCATTCAAATTAAAGACAAGGATAAGGGAAAGAAGGGTAAAGGGAAGTCTACAGATGTTAAAGACAGGAGTTCAAAGGACAGTTCAAAGGACAGATTAGCAGACGGTATCTTGAGCAGTGTTCGGGAGCTGCAGTCAAGTCTCAGGCCATTGGAGGAAGATGTTGAGGTATTATCGAAGGGTGAGTACCGTGCTTTGAAAGGCAAAACGAAGATATCATCTGATGACCAGCAAAGTGGGACAGGAGGACAAAACAGACAAACGTCTACTGGACTATCGAACCACCAAAGCACAGGGGATGGAGATGGTGGGGGGAGCAAGCAAAGAAAGAAAACCTCCAAGTTCCATAGAGTTCGTTTAGGCGATGGTTCGGTTGCTGCACTCTTAGATTTAAAAAACTCCAACCCTGCTTCAGACTCGGACCCATCCGAAAGAGTCGAGGATGGGAACAATACCGCTGGGGCAGTGCCTGTTCGGGGTGTGTGGCGAAACGGTGCTCAGAGGCTCTTCTCCTAG | 2478 | 44.87 | MDDSCAVCADALEWVAYGSCGHRDVCSTCVARLRFICGDRCCCICKSESTVVFVTKALGDYTRTINDFTVFPSEPREGRCGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDGSKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKIFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEYCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQAHFLCEDETCLSKKFIVFQSESEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNDQDNRRGRRTFRRDSSDDLLSVAIQESFETANVDDTTHDPLPSGQVDSDQGNISNIDPLIEPFESLSTTDAESASRYLQALGHSRNSQLEQSSFPPLSTASSSSHPKPIQDKDNNSMAAHLRRKRNVTVINPAQGWPKSSRAPVVPSNKSSQAWPAINVNHTASSSSGQTKGAVTISNGSSGSGYSNAAQMHVKGKTSSSSGSGSSSSRISHSASAPNLTDMAYTEPSVNDFPPVSAAQARKVPSSSQSSMNTEDVQTANKSLVEKIRAALDFDQDRYAIFKDISAQYRQGQIDPEMYLDCVQQFGLSHLVLELARLCPDAQKQKELVGIYNASLQKEVIQENGRAQDSIQIKDKDKGKKGKGKSTDVKDRSSKDSSKDRLADGILSSVRELQSSLRPLEEDVEVLSKGEYRALKGKTKISSDDQQSGTGGQNRQTSTGLSNHQSTGDGDGGGSKQRKKTSKFHRVRLGDGSVAALLDLKNSNPASDSDPSERVEDGNNTAGAVPVRGVWRNGAQRLFS | 825 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8500242 | 8505493 | - | CmoCh17G009730.1 | Cmo17g00973 | 401356 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 336 | 361 | - | - | |
Cmo17g00973 | 825 | PANTHER | ZINC FINGER PROTEIN 598 | 1 | 823 | IPR044288 | GO:0061630|GO:0072344 | |
Cmo17g00973 | 825 | SMART | c2h2final6 | 108 | 145 | IPR013087 | - | |
Cmo17g00973 | 825 | SMART | c2h2final6 | 252 | 281 | IPR013087 | - | |
Cmo17g00973 | 825 | SMART | c2h2final6 | 221 | 251 | IPR013087 | - | |
Cmo17g00973 | 825 | SMART | c2h2final6 | 197 | 220 | IPR013087 | - | |
Cmo17g00973 | 825 | CDD | RING-HC_ZNF598 | 5 | 46 | IPR041888 | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 336 | 363 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 390 | 419 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 304 | 319 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 298 | 319 | - | - | |
Cmo17g00973 | 825 | ProSiteProfiles | Zinc finger RING-type profile. | 5 | 46 | IPR001841 | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 546 | 563 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 433 | 563 | - | - | |
Cmo17g00973 | 825 | PANTHER | EBR1 | 1 | 823 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 447 | 531 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 654 | 688 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 390 | 417 | - | - | |
Cmo17g00973 | 825 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 199 | 220 | IPR013087 | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 648 | 688 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 722 | 825 | - | - | |
Cmo17g00973 | 825 | MobiDBLite | consensus disorder prediction | 726 | 757 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00973 | K22381 | - | csv:101214376 | 1373.61 |