Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00985 ATGGTGGCTGGAGCAGAGGTTATTGTTTGTCCGAAGAGCCTCCCGGTTTTGGAGGTGCCGTATTACAGTAAGGAGACTCGTCTTGAGGAAATTGAGTCCATTAATGGTGGTCTTTCGATCGATCCGACTCTCAATCGTGTTCGTGATTCCGAACCGGTTTCTTCCAGTTCACAATCGGATATTAAACCCAGGAAGAAAATTCCAGATTCCGACGCCGATAAGGCGAAGGATAAGGAATTTCCGAATCTCCGGTCGGGTAGCTTTGCTGATATTGGACCGAGGAGATTCATGGAAGATGAACACATAAGGATAGACGATTTGTCTTCGCATTTAGGATCGCTGTTTAAGTTTCCTAAGCCAAGTGCCTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTCAATTTTCCTCAAATGCCAGATTTCGATGAAGTCTTGCCGGAGGAGATACACAATTGCCTCCGGAAAGCATTTCTTCTGGCTGATCAAGCTCTAGCTGATGATTCCGGTGTCAGTAATTCGTGTGGGACGACAGCCCTGACAGCCCTTGTGCTTGGAAGGCATTTAATGGTGGCGAATGCTGGAGATTGCCGGGCTGTTCTCAGCCGGAATGGAGAGGCAGTAGATATGTCACAAGACCACCGGCCAATTTATTCGCTGGAGAAGCAACGGGTGGAAGAGCTGGGTGGCTATGTTGATGGTGGCTATCTGAACGGTGTTTTATCGGTGTCGAGGGCGTTGGGGGATTGGGACATGAAGCTCCCACATGGCTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAAGCAGGTGGTTCTTACAGAGGAGGATGAGTTCTTGATCATAGCTTGTGATGGGATTTGGGACGTGATGTCGAGCCAGCAAGCGGTCAATGTAGTTCGACAGGGGCTTCAACGACACGACGACCCGGAGCGGTGTGCTCGAGAGCTTGTCCTGCGTGCTTTGCAATTCGACTCGTTCGATAATCTGACTGTTGTGGTGGTTTGCTTCTCTAGTTTCCATGGCGGCGGTTCCTCACTACCACAGCAGAGAAAATTGAGATACTGCAGTCTGTCTGCGCAGGCTCTTTGTAGTCTGCAGAGATGGTTGGATAACAGTGGATGCCAATGA 1182 49.07 MVAGAEVIVCPKSLPVLEVPYYSKETRLEEIESINGGLSIDPTLNRVRDSEPVSSSSQSDIKPRKKIPDSDADKAKDKEFPNLRSGSFADIGPRRFMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVNFPQMPDFDEVLPEEIHNCLRKAFLLADQALADDSGVSNSCGTTALTALVLGRHLMVANAGDCRAVLSRNGEAVDMSQDHRPIYSLEKQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECKQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARELVLRALQFDSFDNLTVVVVCFSSFHGGGSSLPQQRKLRYCSLSAQALCSLQRWLDNSGCQ 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8536861 8539258 - CmoCh17G009850.1 Cmo17g00985 401368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00985 393 MobiDBLite consensus disorder prediction 62 83 - -
Cmo17g00985 393 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 372 - -
Cmo17g00985 393 CDD PP2Cc 84 354 IPR001932 -
Cmo17g00985 393 SMART PP2C_SIG_2 99 354 IPR001932 -
Cmo17g00985 393 Pfam Protein phosphatase 2C 94 346 IPR001932 -
Cmo17g00985 393 SMART PP2C_4 74 352 IPR001932 -
Cmo17g00985 393 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Cmo17g00985 393 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Cmo17g00985 393 Gene3D - 65 358 IPR036457 -
Cmo17g00985 393 MobiDBLite consensus disorder prediction 41 84 - -
Cmo17g00985 393 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
Cmo17g00985 393 SUPERFAMILY PP2C-like 80 355 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00483 Cmo17g00985 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01262 Cmo-Chr8:7944398 Cmo17g00985 Cmo-Chr17:8536861 8.96E-128 dispersed
Cmo12g01184 Cmo-Chr12:10699434 Cmo17g00985 Cmo-Chr17:8536861 8.94E-84 dispersed
Cmo17g00985 Cmo-Chr17:8536861 Cmo01g01732 Cmo-Chr1:12942300 1.08E-42 dispersed
Cmo17g00985 Cmo-Chr17:8536861 Cmo08g00483 Cmo-Chr8:2984744 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00985 K14803 - csv:101216626 670.233