Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g01082 | ATGGCCGGTATTAAAGTTCACGGAATCCCCACTTCTACAGCCACAGCTAGGGTTCTAGCTGCCCTCTACGAAAAGGGCCTTCAATTCGAGCTTGTTAATGTTAAGTTGCATGAAGGGGAACACAAGAAAGAGCCCTTCCTCTCAATCAATCCCTTTGGTCAAGTTCCTGGGTTTAACGATGGGGATCTGACGCTTTTTGAATCCAGGGCGATCACTCAGTATATCTCGGGAAATTATGCTAGCAACGGAACCGAGTTGATTCCGAAAGACTCCAAGAAAGGGGCGGTCGTGTTAACGTGGATCGAGGTGGAGAGCCACCATTTTGACCCAGTAGCCATGAAACTGGTGTTCGAGTTCTGCCTAAAGCCATTATTTGGGCTGGGTGATGCAGATCCTGCAGTGGTTGAGAAAAGCGAGGCTGATTTAGGCCAAGTTCTTGACATCTACGAGAAAAGGCTGTCCGGGTCCAAATACTTGGGAGGTGACTCCTTCAGCTTGGCTGATCTGCACCATCTCCCCGTATTAGGCTACCTATTGGCTACACCGTCGAAGAAACTGTTTGAATCTAGACCCCATGTCAATGCTTGGGTGGGTGATATCATAGCCAGGCCATCTTGGGCCAAAGTTCTTGCTCTCCGCAAGTGA | 645 | 49.15 | MAGIKVHGIPTSTATARVLAALYEKGLQFELVNVKLHEGEHKKEPFLSINPFGQVPGFNDGDLTLFESRAITQYISGNYASNGTELIPKDSKKGAVVLTWIEVESHHFDPVAMKLVFEFCLKPLFGLGDADPAVVEKSEADLGQVLDIYEKRLSGSKYLGGDSFSLADLHHLPVLGYLLATPSKKLFESRPHVNAWVGDIIARPSWAKVLALRK | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8958042 | 8959383 | - | CmoCh17G010820.1 | Cmo17g01082 | 401465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g01082 | 214 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Cmo17g01082 | 214 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Cmo17g01082 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 4 | 214 | - | - | |
Cmo17g01082 | 214 | SUPERFAMILY | Thioredoxin-like | 2 | 88 | IPR036249 | - | |
Cmo17g01082 | 214 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 214 | IPR010987 | - | |
Cmo17g01082 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE F6-RELATED | 4 | 214 | - | - | |
Cmo17g01082 | 214 | Gene3D | - | 90 | 214 | - | - | |
Cmo17g01082 | 214 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cmo17g01082 | 214 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Cmo17g01082 | 214 | Pfam | Glutathione S-transferase, C-terminal domain | 109 | 204 | IPR004046 | - | |
Cmo17g01082 | 214 | SFLD | Main (cytGST) | 1 | 212 | - | - | |
Cmo17g01082 | 214 | CDD | GST_N_Phi | 4 | 76 | - | - | |
Cmo17g01082 | 214 | SFLD | Main.5: Phi-like | 1 | 212 | - | - | |
Cmo17g01082 | 214 | SUPERFAMILY | GST C-terminal domain-like | 74 | 213 | IPR036282 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g00404 | Cmo17g01082 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00779 | Cmo-Chr4:3893619 | Cmo17g01082 | Cmo-Chr17:8958042 | 1.58E-13 | dispersed | |
Cmo08g00404 | Cmo-Chr8:2503761 | Cmo17g01082 | Cmo-Chr17:8958042 | 2.38E-114 | dispersed | |
Cmo12g00335 | Cmo-Chr12:2098694 | Cmo17g01082 | Cmo-Chr17:8958042 | 2.49E-53 | dispersed | |
Cmo16g00640 | Cmo-Chr16:3156791 | Cmo17g01082 | Cmo-Chr17:8958042 | 1.16E-10 | dispersed | |
Cmo16g00830 | Cmo-Chr16:4362850 | Cmo17g01082 | Cmo-Chr17:8958042 | 2.30E-09 | dispersed | |
Cmo17g01082 | Cmo-Chr17:8958042 | Cmo02g00647 | Cmo-Chr2:4034616 | 6.21E-10 | dispersed | |
Cmo17g01082 | Cmo-Chr17:8958042 | Cmo08g00403 | Cmo-Chr8:2501640 | 2.00E-108 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g01082 | K00799 | - | csv:101212291 | 379.407 |