Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g01086 ATGGAAGTCGATCGGACGGCTGAGAACGACCACTGTCCCGATCTCCAACAGAACTCCGGCGAGTCAAGGCCTAACCTGACTGAAACGAACCTCCGACGACACGATTCATTGGACTTCGAATCCCGCTCTGTTAAGGCGGCGGGGAAGGCGGCGGCGACCTGGGGAGTGATACTTCAACTGGCGTTTCAGAGCGTGGGGATTGTGTACGGAGATATCGGAACGTCGCCGTTGTACGTATATGCCAGCACGTTCAGTGAGGGTATCAAGCATAACGACGACGTTTTGGGTGTGCTGTCTTTGATTCTCTACACACTTACCTTAATCCCTTTGGTTAAGTACGTCTTCTTGGTCTTACAGGCCAACGATAACGGCGAAGGTGGGACGTTTGCATTATACTCTTTACTATGCCGATACGCGAAGATCGGGCTGATACCAAGCGAGCAAGCGGAAGATCAAGAGGTATCGAATTTTCAGGTGGAGCTACCGACCAACCGCCTCAAAATGGCGTCTTGCCTGAAGTCCAAGCTGGAGAACAGCCGCGCCGCCAAGGTTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACAGCGTCCTCACTCCTTCCATCTCCGTTTTATCGGCCGTGGGAGGAATCAAGAATGCTACCTCGACTATGACACAAGAGAAAATAGTGTGGATATCAGCAGCAATCTTGGTTTGCCTGTTCATGGTGCAAAGATTTGGTACCCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCACTTGGTTTGTACTTATTGGTGGCATTGGCTTCTACAATTTCTTGAAATTTGACCCTTCTGTCATCAAATCTGTTAATCCTATATACATTTTTTACTACTTCAAACGAAACAAAAGGGACGCTTGGATCTCTCTCGGTGGTGCCGTTCTTTCCATTACCGGGACTGAGGCTCTGTTTGCGGACTTGGGACACTTTAGTGTGACGTCTATAAGACTAAGCATGTGTTGTGTGGCTTACCCTGCCCTTGTCTCTGCGTACGTTGGCCAAGCCTCCTTTCTCCGTGAGAATGCTCATCTTGTCTCCGACGCCTTCTTTAGCTCCATTCCAGGTGCTCTCTATTGGCCTATGTTTGTGGTGGCCGTGCTTGCCTCCATCGTCGCTAGCCAAGCGATGATCTCGGGTACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGTTGTTTCCCTAGAGTTAAAGTTATTCATACTTCTTCCAAGTACGAGGGTCAAGTTTACATCCCTGAAGTTAACTACCTTCTTATGGTGGCTTGTCTTGGAGTCACTCTAGGGTTCAAAGATACAACTAGAATCGGAAATGCTTATGGCATTGCAGTGGTGTTCGTAATGACACTTACTTCAAGTTTCTTGGTGCTCATCATGATCATGATATGGAAATCTCACATACTCGTCATACTATCCTATGTTTTCACCATTGGTTTATTGGAGCTTTTATACCTAAGTTCAGTCCTTTACAAGTTCGATCGAGGGGGCTATCTTCCTTTAGCTTTTGCAGGGTTTCTCATGATAATAATGTACATTTGGTATGACGTCCATAGGAGAAAATACTACTACGAGCTTGAGCACAAGATTTCTCCTCAAAAGCTCAAGGACATGCCATCTCTCACAACTCTCAATCGTGTCCCTGGCCTTGCCTTATTCTACTCCGAGCTTGTCCAAGGCATACCCCCAATCTTCAAGCATTATATAGCCAACATTCCCACTCTCCAAAGGGTCCTCGTTTTCGTGTCCTTCAAATCCCTCCCAATAAGCAAAGTCCTAATGGAAGAGCGGTTCCTGTTTAGACGAGTCGAGCCTGATGATCTCAACGTGTTTCGATGCGTGGTTCGATATGGGTACAAAGATATCATCCACGAACAAGAGTCATTCGAGAGAGTACTAGTGGAGAAATTAAAGATGTTTATAGAAGAAGAGTCATGGATATTACGAAACGAAGATAACGATAGAGCAAGCAGGGTATATGAAGGGATAGAGGTGGTGGATAGAGCTTGGAGAGATGGAATTGTTCACTTGATCGGACAAAACGAGGTGGTGGCAAGTAATGGGTCAGGGTTAGCTAAACGGGTTTTGATCAATTATGCGTACAATGCATTAAGGAGAAATTTGAGACAAAATGAAGAGATCTTCTACATCCCTAGGGAGCGTATGCTCAAAGTAGGAATGACGTATGAGCTTTAA 2232 46.33 MEVDRTAENDHCPDLQQNSGESRPNLTETNLRRHDSLDFESRSVKAAGKAAATWGVILQLAFQSVGIVYGDIGTSPLYVYASTFSEGIKHNDDVLGVLSLILYTLTLIPLVKYVFLVLQANDNGEGGTFALYSLLCRYAKIGLIPSEQAEDQEVSNFQVELPTNRLKMASCLKSKLENSRAAKVFLLFATMLGTSMVIGDSVLTPSISVLSAVGGIKNATSTMTQEKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICTWFVLIGGIGFYNFLKFDPSVIKSVNPIYIFYYFKRNKRDAWISLGGAVLSITGTEALFADLGHFSVTSIRLSMCCVAYPALVSAYVGQASFLRENAHLVSDAFFSSIPGALYWPMFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVIHTSSKYEGQVYIPEVNYLLMVACLGVTLGFKDTTRIGNAYGIAVVFVMTLTSSFLVLIMIMIWKSHILVILSYVFTIGLLELLYLSSVLYKFDRGGYLPLAFAGFLMIIMYIWYDVHRRKYYYELEHKISPQKLKDMPSLTTLNRVPGLALFYSELVQGIPPIFKHYIANIPTLQRVLVFVSFKSLPISKVLMEERFLFRRVEPDDLNVFRCVVRYGYKDIIHEQESFERVLVEKLKMFIEEESWILRNEDNDRASRVYEGIEVVDRAWRDGIVHLIGQNEVVASNGSGLAKRVLINYAYNALRRNLRQNEEIFYIPRERMLKVGMTYEL 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8972728 8976502 + CmoCh17G010860.1 Cmo17g01086 401469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g01086 743 MobiDBLite consensus disorder prediction 1 32 - -
Cmo17g01086 743 TIGRFAM kup: potassium uptake protein 60 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo17g01086 743 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 26 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo17g01086 743 MobiDBLite consensus disorder prediction 12 26 - -
Cmo17g01086 743 Pfam K+ potassium transporter 61 633 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo17g01086 743 PANTHER POTASSIUM TRANSPORTER 26 742 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00400 Cmo17g01086 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00400 Cmo-Chr8:2483546 Cmo17g01086 Cmo-Chr17:8972728 0 dispersed
Cmo14g00916 Cmo-Chr14:4855519 Cmo17g01086 Cmo-Chr17:8972728 0 dispersed
Cmo14g00918 Cmo-Chr14:4863779 Cmo17g01086 Cmo-Chr17:8972728 0 dispersed
Cmo14g01424 Cmo-Chr14:11605386 Cmo17g01086 Cmo-Chr17:8972728 0 dispersed
Cmo17g01086 Cmo-Chr17:8972728 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo17g01084 Cmo-Chr17:8965554 Cmo17g01086 Cmo-Chr17:8972728 6.39E-16 proximal
Cmo17g01085 Cmo-Chr17:8971054 Cmo17g01086 Cmo-Chr17:8972728 6.93E-30 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g01086 K03549 - csv:101213493 1298.49