Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g01116 ATGGCTGGGAGTAATGAAGTCAATCTTAATGAATCTAAGAGGGTTGTTCCTTTGAACACATGGGTGCTCATATCCAATTTCAAGCTAGCTTACACCATCCTCCGCCGCTCTGATGGCACCTTCAACCGTGAGTTAGCGGAGTATCTCGAGCGCAAAGTTCCAGCCAATGTGAATCCAGTTGATGGGGTTTTCTCATTCGATAATGTTGATCGAGCTTCTGGCCTTCTCAACCGAGTTTATCAGCCGGCCCCAGATAATGAAGCTCGCTGGGGCATCATTGATCTTGAGAAGCCTCTAAGCAAGTCCAAAGTTGTACCTGTCATCCTGTTTTTTCATGGTGGGAGCTTTGCTCATTCATCAGCCAACAGTGCTATTTACGACACCTTTTGCCGCCGTATCGTAAGTGTCTGCAAGGCAGTTGTTGTCTCGGTTAACTACCGTCGATCGCCTGAATATCGATATCCATGTGCATACGAAGATGGCTGGACTGCACTCAAATGGGTGAAATCAAAGAAATGGCTTCAAAGTGGGAAGGATTCCAAGGTTCATGTGTATTTAGCTGGTGATAGTTCTGGTGGCAACATAGCTCATCATGTTGCAGCAAGGGCAGCTGAGGAAGACATCGAGGTATTAGGCAACATACTTCTTCACCCGATGTTCGGGGGCGAAAAGAGAACCGAATCAGAGAAGAAACTCGACGGTAAATACTTCGTAACCATTCAAGACCGAGATTGGTACTGGAAAGCTTATCTCCCTGAAGGAGAAGACAGAGACCACCCAGCTTGTAACATTTTTGGCCCCAAAGCCAAAAGCCTAGAGGGAATCAACTTCCCGAAAAGTCTCGTCGTTGTCGCCGGTCTGGACCTGATGCAAGATTGGCAACTCGCATATGTGCAGGGCCTGAAAGACTCCGGTCACGACGTGAAACTTCTCTTCCTCGAGAAGGCGACAATCGGGTTCTATTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAGACCACTTTATCAACCCTTAA 1029 46.84 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRSDGTFNRELAEYLERKVPANVNPVDGVFSFDNVDRASGLLNRVYQPAPDNEARWGIIDLEKPLSKSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSVCKAVVVSVNYRRSPEYRYPCAYEDGWTALKWVKSKKWLQSGKDSKVHVYLAGDSSGGNIAHHVAARAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVTIQDRDWYWKAYLPEGEDRDHPACNIFGPKAKSLEGINFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEKATIGFYFLPNNEHFYCLMEEIDHFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9141584 9143859 + CmoCh17G011160.1 Cmo17g01116 401499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g01116 342 PANTHER ARYLACETAMIDE DEACETYLASE 2 340 - -
Cmo17g01116 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Cmo17g01116 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Cmo17g01116 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Cmo17g01116 342 SUPERFAMILY alpha/beta-Hydrolases 84 341 IPR029058 -
Cmo17g01116 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Cmo17g01116 342 PANTHER GIBBERELLIN RECEPTOR GID1B 2 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00369 Cmo17g01116 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01194 Cmo-Chr10:10949613 Cmo17g01116 Cmo-Chr17:9141584 0 dispersed
Cmo11g01145 Cmo-Chr11:6512388 Cmo17g01116 Cmo-Chr17:9141584 0 dispersed
Cmo17g01116 Cmo-Chr17:9141584 Cmo01g00921 Cmo-Chr1:5202966 9.19E-74 dispersed
Cmo17g01116 Cmo-Chr17:9141584 Cmo08g00369 Cmo-Chr8:2314082 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g01116 K14493 - csv:101219912 657.907