Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g01116 | ATGGCTGGGAGTAATGAAGTCAATCTTAATGAATCTAAGAGGGTTGTTCCTTTGAACACATGGGTGCTCATATCCAATTTCAAGCTAGCTTACACCATCCTCCGCCGCTCTGATGGCACCTTCAACCGTGAGTTAGCGGAGTATCTCGAGCGCAAAGTTCCAGCCAATGTGAATCCAGTTGATGGGGTTTTCTCATTCGATAATGTTGATCGAGCTTCTGGCCTTCTCAACCGAGTTTATCAGCCGGCCCCAGATAATGAAGCTCGCTGGGGCATCATTGATCTTGAGAAGCCTCTAAGCAAGTCCAAAGTTGTACCTGTCATCCTGTTTTTTCATGGTGGGAGCTTTGCTCATTCATCAGCCAACAGTGCTATTTACGACACCTTTTGCCGCCGTATCGTAAGTGTCTGCAAGGCAGTTGTTGTCTCGGTTAACTACCGTCGATCGCCTGAATATCGATATCCATGTGCATACGAAGATGGCTGGACTGCACTCAAATGGGTGAAATCAAAGAAATGGCTTCAAAGTGGGAAGGATTCCAAGGTTCATGTGTATTTAGCTGGTGATAGTTCTGGTGGCAACATAGCTCATCATGTTGCAGCAAGGGCAGCTGAGGAAGACATCGAGGTATTAGGCAACATACTTCTTCACCCGATGTTCGGGGGCGAAAAGAGAACCGAATCAGAGAAGAAACTCGACGGTAAATACTTCGTAACCATTCAAGACCGAGATTGGTACTGGAAAGCTTATCTCCCTGAAGGAGAAGACAGAGACCACCCAGCTTGTAACATTTTTGGCCCCAAAGCCAAAAGCCTAGAGGGAATCAACTTCCCGAAAAGTCTCGTCGTTGTCGCCGGTCTGGACCTGATGCAAGATTGGCAACTCGCATATGTGCAGGGCCTGAAAGACTCCGGTCACGACGTGAAACTTCTCTTCCTCGAGAAGGCGACAATCGGGTTCTATTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAGACCACTTTATCAACCCTTAA | 1029 | 46.84 | MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRSDGTFNRELAEYLERKVPANVNPVDGVFSFDNVDRASGLLNRVYQPAPDNEARWGIIDLEKPLSKSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSVCKAVVVSVNYRRSPEYRYPCAYEDGWTALKWVKSKKWLQSGKDSKVHVYLAGDSSGGNIAHHVAARAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVTIQDRDWYWKAYLPEGEDRDHPACNIFGPKAKSLEGINFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEKATIGFYFLPNNEHFYCLMEEIDHFINP | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9141584 | 9143859 | + | CmoCh17G011160.1 | Cmo17g01116 | 401499 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g01116 | 342 | PANTHER | ARYLACETAMIDE DEACETYLASE | 2 | 340 | - | - | |
Cmo17g01116 | 342 | Gene3D | alpha/beta hydrolase | 1 | 341 | IPR029058 | - | |
Cmo17g01116 | 342 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative serine active site. | 184 | 196 | IPR033140 | - | |
Cmo17g01116 | 342 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative histidine active site. | 108 | 124 | IPR002168 | GO:0016787 | |
Cmo17g01116 | 342 | SUPERFAMILY | alpha/beta-Hydrolases | 84 | 341 | IPR029058 | - | |
Cmo17g01116 | 342 | Pfam | alpha/beta hydrolase fold | 108 | 321 | IPR013094 | GO:0016787 | |
Cmo17g01116 | 342 | PANTHER | GIBBERELLIN RECEPTOR GID1B | 2 | 340 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g00369 | Cmo17g01116 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g01194 | Cmo-Chr10:10949613 | Cmo17g01116 | Cmo-Chr17:9141584 | 0 | dispersed | |
Cmo11g01145 | Cmo-Chr11:6512388 | Cmo17g01116 | Cmo-Chr17:9141584 | 0 | dispersed | |
Cmo17g01116 | Cmo-Chr17:9141584 | Cmo01g00921 | Cmo-Chr1:5202966 | 9.19E-74 | dispersed | |
Cmo17g01116 | Cmo-Chr17:9141584 | Cmo08g00369 | Cmo-Chr8:2314082 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g01116 | K14493 | - | csv:101219912 | 657.907 |