Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g01183 ATGTTTTCCCCAACAATTATGTCCAATTCAACTTCCTTGTCTGATCAAGCTACCATCTTTTCCAATATTCACCACTCTCCACAAAAGCTCAAGAAGAAACGAAGCCTCCCCGGTAACCCAGACCCAGATGCAGAAGTGATAGCACTTTCACCAACAACACTTCTTGCAACAAATAGATTTGTGTGTGAAATTTGCAATAAGGGTTTCCAAAGGGATCAAAACTTGCAGCTACACAGAAGAGGCCACAAACTTCCATGGAAATTGAAGCAAAGAAGCAGCAAAGAAATGAAGAAGAAGGCGTATGTGTGCCCAGAGGAAGGTTGTGTTCATCATAACCCTTCAAGAGCATTAGGAGATCTCACAGGAATCAAAAAACATTACTCCAGAAAACATGGAGAAAAGAAATGGAAATGCCTTAAATGCTCCAAACTCTACGCTGTTCAATCTGATTGGAAAGCTCACTCCAAAACTTGTGGAACTAGAGAGTATAGATGTGACTGTGGAACCCTTTTCTCCAGGAAAGATAGGTTCCTAACCCATAGAGCTTTTTGTGATGCATTGGCGGAGGAGAGTGCACGGCTCTCGGCTAACCAATTGGCCATAGCTTCGGCCGCCTCAGGTGCCACGGGTGTTGACGTAAGCCTGTCTTCGACCACGGTTGCTCAATCTCTCTTTCCTTTTGGCAACCATTATCAGTTCTCGAATTCGCTAATACCGTCGTCTCCATCGTCACTGTCGTTGTCATCGTCGCAAACCCTTGTGTCCCTAAACCCTTGGAACCATCCCCTAAACCCTAACCCTAATCATACCCTTCAAATGATCAAGCCTGAAGACTCAAATTCTCACCATTTTCAACAAATTCCAAATTTGCCCCTCTCCGATGACTCCTCCAATAATAACAATTACCACCCTTTTGGTCTAATTCAAGATCACCACCACAAGGCGAGGTCATCCTCCTCCTCCTCCTCTTCCATGATAACCTCACCCTTTAGGAACCTCCACGTGTCGGTGCAACCGGCCTCAAATGTTGCCACGTCAGCTCACCTATCAGCCACAGCCCTACTACAAAAGGCCGCAACAGTTGGCATTGACGCTGCAAAATCAGGTCACCATCAGCCCGAGTCAGTGGGTCATATAACTCACTTCAACATCCCCGAGTTCCGCCCATCAAATCATATTAGCTCGCTGAGTCAACTCGGTCCAGACTACGCCACGTGGCAGAAGAGTGACCGGTTGACCAGGGACTTCCTCGGTCTTACCGGACATGGGAACGGCACCGGAAGTGGTTCCGGCAGCGGGGGATCGGTGCATGTTAGCATGATCGTTAAGGATATGCTAACGTACGCAGGTGGAATTGAGATGTTTAAGCCTCACAATAATAATAATAATAGTAATGGTTTTGGATATGGGGAGGCAGCTGCCAATGGAACTTGGGGAGACTGTTGA 1446 46.82 MFSPTIMSNSTSLSDQATIFSNIHHSPQKLKKKRSLPGNPDPDAEVIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHKLPWKLKQRSSKEMKKKAYVCPEEGCVHHNPSRALGDLTGIKKHYSRKHGEKKWKCLKCSKLYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDRFLTHRAFCDALAEESARLSANQLAIASAASGATGVDVSLSSTTVAQSLFPFGNHYQFSNSLIPSSPSSLSLSSSQTLVSLNPWNHPLNPNPNHTLQMIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGIEMFKPHNNNNNSNGFGYGEAAANGTWGDC 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9502242 9504755 + CmoCh17G011830.1 Cmo17g01183 401566

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g01183 481 Pfam Zinc-finger double-stranded RNA-binding 60 83 IPR022755 -
Cmo17g01183 481 SUPERFAMILY beta-beta-alpha zinc fingers 59 156 IPR036236 -
Cmo17g01183 481 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Cmo17g01183 481 MobiDBLite consensus disorder prediction 264 305 - -
Cmo17g01183 481 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Cmo17g01183 481 MobiDBLite consensus disorder prediction 264 306 - -
Cmo17g01183 481 SMART c2h2final6 60 82 IPR013087 -
Cmo17g01183 481 SMART c2h2final6 101 131 IPR013087 -
Cmo17g01183 481 MobiDBLite consensus disorder prediction 24 43 - -
Cmo17g01183 481 Gene3D Classic Zinc Finger 93 184 - -
Cmo17g01183 481 Gene3D Classic Zinc Finger 59 83 - -
Cmo17g01183 481 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 20 465 - -
Cmo17g01183 481 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 465 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g01183 K25870 IDD3S; zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13 - csv:101208253 658.677
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g01183 Cmo-Chr17:9502242 Cmo14g00196 Cmo-Chr14:889620 5.55E-105 dispersed
Cmo17g01183 Cmo-Chr17:9502242 Cmo08g00317 Cmo-Chr8:1974557 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo06g00209 . 559 1273 C2H2 Transcription Factor Family AT5G01310 60.9 9.1e-244 840.5
Cmo03g00099 . 59 317 C2H2 Transcription Factor Family AT3G57670 66.6 1.5e-107 387.1
Cmo07g01338 . 103 326 C2H2 Transcription Factor Family AT3G57670 72.2 2.5e-107 386.3
Cmo06g00072 CST 1 343 C2H2 Transcription Factor Family AT3G57670 66.1 1.4e-105 380.6
Cmo20g00081 CST 61 289 C2H2 Transcription Factor Family AT3G57670 68.1 7.6e-104 374.8
Cmo02g01279 CST 164 342 C2H2 Transcription Factor Family AT3G57670 91.1 1.3e-103 374.0
Cmo14g00447 CST 151 350 C2H2 Transcription Factor Family AT3G57670 84.5 9.3e-102 367.9
Cmo17g00925 . 110 282 C2H2 Transcription Factor Family AT3G57670 84.4 4.9e-95 345.5
Cmo04g02100 . 105 263 C2H2 Transcription Factor Family AT3G57670 83.6 1.9e-86 317.0
Cmo04g02100 . 106 272 C2H2 Transcription Factor Family AT1G08290 75.4 1.5e-82 303.9
Cmo20g00081 CST 115 282 C2H2 Transcription Factor Family AT1G08290 73.8 1.4e-80 297.4
Cmo02g01279 CST 168 332 C2H2 Transcription Factor Family AT1G08290 75.9 5.2e-80 295.4
Cmo17g00925 . 97 276 C2H2 Transcription Factor Family AT1G08290 70.1 8.8e-80 294.7
Cmo07g01338 . 147 314 C2H2 Transcription Factor Family AT1G08290 72.2 4.4e-79 292.4
Cmo03g00099 . 89 307 C2H2 Transcription Factor Family AT1G08290 56.6 2.2e-78 290.0
Cmo06g00072 CST 158 316 C2H2 Transcription Factor Family AT1G08290 74.4 4.8e-78 288.9
Cmo14g00447 CST 157 311 C2H2 Transcription Factor Family AT1G08290 75.6 1.1e-77 287.7
Cmo03g00099 . 15 314 C2H2 Transcription Factor Family AT3G20880 54.7 3.7e-96 349.4
Cmo20g00081 CST 61 285 C2H2 Transcription Factor Family AT3G20880 68.1 1.8e-95 347.1
Cmo07g01338 . 63 323 C2H2 Transcription Factor Family AT3G20880 58.9 9.1e-95 344.7
Cmo02g01279 CST 163 338 C2H2 Transcription Factor Family AT3G20880 79.4 1.2e-91 334.3
Cmo06g00072 CST 159 343 C2H2 Transcription Factor Family AT3G20880 76.8 2.3e-90 330.1
Cmo14g00447 CST 158 309 C2H2 Transcription Factor Family AT3G20880 88.8 3.0e-90 329.7
Cmo17g00925 . 32 285 C2H2 Transcription Factor Family AT3G20880 56.7 7.4e-89 325.1
Cmo04g02100 . 107 260 C2H2 Transcription Factor Family AT3G20880 83.1 7.2e-84 308.5
Cmo07g01338 . 63 323 C2H2 Transcription Factor Family AT1G51220 65.3 3.1e-101 365.9
Cmo03g00099 . 57 314 C2H2 Transcription Factor Family AT1G51220 64.7 1.4e-98 357.1
Cmo20g00081 CST 61 285 C2H2 Transcription Factor Family AT1G51220 69.9 3.0e-96 349.4
Cmo02g01279 CST 164 338 C2H2 Transcription Factor Family AT1G51220 82.2 3.1e-93 339.3
Cmo06g00072 CST 44 310 C2H2 Transcription Factor Family AT1G51220 60.0 2.6e-92 336.3
Cmo14g00447 CST 153 309 C2H2 Transcription Factor Family AT1G51220 89.2 1.0e-91 334.3
Cmo17g00925 . 32 276 C2H2 Transcription Factor Family AT1G51220 59.6 7.2e-90 328.2
Cmo04g02100 . 107 260 C2H2 Transcription Factor Family AT1G51220 83.1 2.6e-84 309.7
Cmo04g02100 . 28 263 C2H2 Transcription Factor Family AT1G13290 70.6 2.2e-98 356.3
Cmo07g01338 . 99 316 C2H2 Transcription Factor Family AT1G13290 69.7 2.3e-87 319.7
Cmo03g00099 . 95 293 C2H2 Transcription Factor Family AT1G13290 72.1 4.1e-84 308.9
Cmo20g00081 CST 61 278 C2H2 Transcription Factor Family AT1G13290 66.1 4.5e-83 305.4
Cmo02g01279 CST 166 331 C2H2 Transcription Factor Family AT1G13290 78.3 5.0e-82 302.0
Cmo06g00072 CST 144 312 C2H2 Transcription Factor Family AT1G13290 77.5 1.4e-81 300.4
Cmo14g00447 CST 155 314 C2H2 Transcription Factor Family AT1G13290 80.9 1.4e-81 300.4
Cmo17g00925 . 89 265 C2H2 Transcription Factor Family AT1G13290 70.9 9.7e-78 287.7
Cmo01g01850 . 1 169 C2H2 Transcription Factor Family AT5G67450 50.3 3.0e-37 152.9
Cmo04g00383 . 1 301 C2H2 Transcription Factor Family AT5G51230 58.6 1.8e-94 344.4
Cmo16g00241 . 32 142 C2H2 Transcription Factor Family AT5G51230 80.2 5.1e-41 166.8
Cmo09g00513 CST 1 392 C2H2 Transcription Factor Family AT2G24500 59.1 3.0e-127 452.6
Cmo01g01596 CST 1 392 C2H2 Transcription Factor Family AT2G24500 56.4 1.7e-122 436.8
Cmo13g01208 . 13 410 C2H2 Transcription Factor Family AT1G25250 55.8 1.8e-89 327.0
Cmo13g01006 CST 28 211 C2H2 Transcription Factor Family AT1G25250 78.5 5.5e-86 315.5
Cmo01g00783 . 20 377 C2H2 Transcription Factor Family AT1G25250 55.4 9.4e-86 314.7
Cmo18g00067 CST 23 211 C2H2 Transcription Factor Family AT1G25250 77.8 4.4e-83 305.8
Cmo04g02246 CST 31 178 C2H2 Transcription Factor Family AT1G25250 85.8 2.2e-74 276.9
Cmo12g00430 CCT,ECH 1 226 C2H2 Transcription Factor Family AT1G25250 52.8 4.3e-62 236.1
Cmo01g01957 CCT,CST,ECH 31 189 C2H2 Transcription Factor Family AT1G25250 64.8 4.0e-60 229.6
Cmo08g00742 . 41 195 C2H2 Transcription Factor Family AT1G25250 65.0 1.2e-59 228.0
Cmo08g00317 . 30 183 C2H2 Transcription Factor Family AT1G25250 65.6 3.4e-59 226.5
Cmo09g00165 CCT,CST,ECH 30 190 C2H2 Transcription Factor Family AT1G25250 64.0 3.4e-59 226.5
Cmo11g01172 . 37 192 C2H2 Transcription Factor Family AT1G25250 65.6 4.4e-59 226.1
Cmo07g00500 CCT,CST,ECH 519 678 C2H2 Transcription Factor Family AT1G25250 62.0 1.3e-58 224.6
Cmo11g01874 CCT 18 222 C2H2 Transcription Factor Family AT1G25250 50.2 1.7e-58 224.2
Cmo03g00791 CCT,CST,ECH 32 185 C2H2 Transcription Factor Family AT1G25250 64.3 2.2e-58 223.8
Cmo01g00064 . 57 210 C2H2 Transcription Factor Family AT1G25250 65.4 2.9e-58 223.4
Cmo14g00196 CCT,CST,ECH 40 191 C2H2 Transcription Factor Family AT1G25250 63.6 3.7e-58 223.0
Cmo20g00655 CCT,CST 16 169 C2H2 Transcription Factor Family AT1G25250 64.3 6.4e-58 222.2
Cmo03g00793 . 9 180 C2H2 Transcription Factor Family AT1G25250 58.3 8.3e-58 221.9
Cmo02g00202 CCT,CST 11 187 C2H2 Transcription Factor Family AT1G25250 57.1 1.4e-57 221.1
Cmo01g01780 . 25 184 C2H2 Transcription Factor Family AT1G25250 63.2 1.8e-57 220.7
Cmo16g00708 CCT,ECH 28 181 C2H2 Transcription Factor Family AT1G25250 64.3 1.8e-57 220.7
Cmo07g00978 CCT,ECH 31 177 C2H2 Transcription Factor Family AT1G25250 64.0 2.4e-57 220.3
Cmo14g01296 . 41 217 C2H2 Transcription Factor Family AT1G25250 58.1 3.2e-57 219.9
Cmo17g00694 . 90 241 C2H2 Transcription Factor Family AT1G25250 63.6 1.6e-56 217.6
Cmo06g00365 CCT,CST,ECH 33 176 C2H2 Transcription Factor Family AT1G25250 65.8 2.7e-56 216.9
Cmo17g01183 . 31 184 C2H2 Transcription Factor Family AT1G25250 62.4 5.9e-56 215.7
Cmo18g00662 . 43 205 C2H2 Transcription Factor Family AT1G25250 57.2 7.8e-56 215.3
Cmo02g01315 CCT,CST 11 339 C2H2 Transcription Factor Family AT5G12330 51.6 2.5e-65 246.9
Cmo02g00060 CST 39 309 C2H2 Transcription Factor Family AT2G32930 56.0 1.1e-37 155.2
Cmo15g00343 CST 4 332 C2H2 Transcription Factor Family AT3G27970 65.4 8.6e-134 474.2
Cmo04g02842 CST 5 326 C2H2 Transcription Factor Family AT3G27970 61.9 7.8e-127 451.1
Cmo06g00209 . 559 1273 C2H2 Transcription Factor Family AT5G01310 60.9 9.1e-244 840.5
Cmo19g00814 CCT 58 296 C2H2 Transcription Factor Family AT4G35280 53.3 8.8e-65 244.6
Cmo13g00264 . 9 318 C2H2 Transcription Factor Family AT5G22890 50.6 2.7e-82 303.1
Cmo03g00851 . 112 270 C2H2 Transcription Factor Family AT5G22890 60.6 3.4e-56 216.5
Cmo15g00913 CST 105 381 C2H2 Transcription Factor Family AT1G68130 50.8 9.0e-77 284.6
Cmo04g02246 CST 79 178 C2H2 Transcription Factor Family AT1G68130 83.0 1.7e-46 184.1
Cmo01g01957 CCT,CST,ECH 80 189 C2H2 Transcription Factor Family AT1G68130 68.8 2.7e-41 166.8
Cmo09g00165 CCT,CST,ECH 81 190 C2H2 Transcription Factor Family AT1G68130 67.9 2.3e-40 163.7
Cmo12g00430 CCT,ECH 79 186 C2H2 Transcription Factor Family AT1G68130 66.4 2.0e-39 160.6
Cmo20g00655 CCT,CST 62 169 C2H2 Transcription Factor Family AT1G68130 64.5 2.2e-38 157.1
Cmo07g00978 CCT,ECH 70 177 C2H2 Transcription Factor Family AT1G68130 63.6 2.8e-38 156.8
Cmo14g00196 CCT,CST,ECH 83 191 C2H2 Transcription Factor Family AT1G68130 60.9 2.8e-38 156.8
Cmo01g00064 . 102 210 C2H2 Transcription Factor Family AT1G68130 62.7 6.3e-38 155.6
Cmo18g00662 . 88 205 C2H2 Transcription Factor Family AT1G68130 57.5 6.3e-38 155.6
Cmo08g00742 . 87 195 C2H2 Transcription Factor Family AT1G68130 60.9 1.4e-37 154.5
Cmo08g00317 . 76 183 C2H2 Transcription Factor Family AT1G68130 62.7 1.8e-37 154.1
Cmo16g00708 CCT,ECH 74 181 C2H2 Transcription Factor Family AT1G68130 64.5 2.4e-37 153.7
Cmo02g00202 CCT,CST 80 187 C2H2 Transcription Factor Family AT1G68130 64.5 3.1e-37 153.3
Cmo04g01048 . 80 197 C2H2 Transcription Factor Family AT1G68130 55.8 7.0e-37 152.1
Cmo17g00694 . 133 241 C2H2 Transcription Factor Family AT1G68130 60.9 9.1e-37 151.8
Cmo03g00791 CCT,CST,ECH 78 185 C2H2 Transcription Factor Family AT1G68130 62.7 9.1e-37 151.8
Cmo11g01874 CCT 74 183 C2H2 Transcription Factor Family AT1G68130 62.2 9.1e-37 151.8
Cmo11g01172 . 83 192 C2H2 Transcription Factor Family AT1G68130 62.2 1.2e-36 151.4
Cmo14g01296 . 87 195 C2H2 Transcription Factor Family AT1G68130 60.9 1.6e-36 151.0
Cmo13g01208 . 34 410 C2H2 Transcription Factor Family AT2G01940 52.1 4.1e-85 312.8
Cmo13g01006 CST 31 380 C2H2 Transcription Factor Family AT2G01940 54.9 6.6e-83 305.4
Cmo01g00783 . 23 214 C2H2 Transcription Factor Family AT2G01940 74.5 1.1e-80 298.1
Cmo18g00067 CST 26 255 C2H2 Transcription Factor Family AT2G01940 65.9 2.0e-79 293.9
Cmo04g02246 CST 36 194 C2H2 Transcription Factor Family AT2G01940 77.4 1.9e-69 260.8
Cmo14g00196 CCT,CST,ECH 44 193 C2H2 Transcription Factor Family AT2G01940 64.5 6.2e-57 219.2
Cmo01g01957 CCT,CST,ECH 41 187 C2H2 Transcription Factor Family AT2G01940 67.3 1.1e-56 218.4
Cmo08g00317 . 37 185 C2H2 Transcription Factor Family AT2G01940 66.4 1.4e-56 218.0
Cmo08g00742 . 44 197 C2H2 Transcription Factor Family AT2G01940 62.8 1.8e-56 217.6
Cmo12g00430 CCT,ECH 40 188 C2H2 Transcription Factor Family AT2G01940 65.1 4.0e-56 216.5
Cmo07g00978 CCT,ECH 31 179 C2H2 Transcription Factor Family AT2G01940 65.1 9.0e-56 215.3
Cmo20g00655 CCT,CST 23 171 C2H2 Transcription Factor Family AT2G01940 65.1 1.2e-55 214.9
Cmo17g00694 . 94 243 C2H2 Transcription Factor Family AT2G01940 63.2 4.5e-55 213.0
Cmo01g01780 . 29 177 C2H2 Transcription Factor Family AT2G01940 65.1 5.8e-55 212.6
Cmo01g00064 . 63 212 C2H2 Transcription Factor Family AT2G01940 63.2 5.8e-55 212.6
Cmo09g00165 CCT,CST,ECH 42 188 C2H2 Transcription Factor Family AT2G01940 66.0 5.8e-55 212.6
Cmo03g00791 CCT,CST,ECH 39 211 C2H2 Transcription Factor Family AT2G01940 58.8 9.9e-55 211.8
Cmo02g00202 CCT,CST 37 189 C2H2 Transcription Factor Family AT2G01940 63.5 2.2e-54 210.7
Cmo06g00365 CCT,CST,ECH 40 180 C2H2 Transcription Factor Family AT2G01940 65.5 2.2e-54 210.7
Cmo11g01172 . 44 194 C2H2 Transcription Factor Family AT2G01940 63.4 3.8e-54 209.9
Cmo03g00793 . 34 182 C2H2 Transcription Factor Family AT2G01940 63.2 3.8e-54 209.9
Cmo16g00708 CCT,ECH 35 183 C2H2 Transcription Factor Family AT2G01940 64.5 4.9e-54 209.5
Cmo14g01296 . 48 197 C2H2 Transcription Factor Family AT2G01940 61.8 4.9e-54 209.5
Cmo07g00500 CCT,CST,ECH 532 680 C2H2 Transcription Factor Family AT2G01940 63.2 6.4e-54 209.1
Cmo18g00662 . 43 197 C2H2 Transcription Factor Family AT2G01940 61.4 1.1e-53 208.4
Cmo17g01183 . 38 186 C2H2 Transcription Factor Family AT2G01940 63.2 1.9e-53 207.6
Cmo11g01874 CCT 35 185 C2H2 Transcription Factor Family AT2G01940 62.1 9.3e-53 205.3
Cmo04g01048 . 34 199 C2H2 Transcription Factor Family AT2G01940 58.0 1.2e-52 204.9
Cmo04g03093 . 9 245 C2H2 Transcription Factor Family AT5G14140 68.2 1.3e-91 333.6
Cmo17g00973 . 1 825 C2H2 Transcription Factor Family AT3G62240 53.8 5.0e-238 821.6
Cmo07g00034 . 1 336 C2H2 Transcription Factor Family AT1G30970 61.5 1.1e-105 380.9
Cmo03g01479 . 1 350 C2H2 Transcription Factor Family AT1G30970 60.9 4.1e-105 379.0
Cmo18g00647 . 2 369 C2H2 Transcription Factor Family AT4G06634 58.3 6.9e-65 245.4
Cmo06g00446 CST 65 256 C2H2 Transcription Factor Family AT4G04885 50.3 1.1e-46 186.0
Cmo04g02426 CST 50 448 C2H2 Transcription Factor Family AT5G64610 91.0 7.0e-218 753.8
Cmo15g00736 CST 1521 1909 C2H2 Transcription Factor Family AT5G64610 80.5 4.3e-183 638.3
Cmo04g02426 CST 50 448 C2H2 Transcription Factor Family AT5G09740 71.9 1.6e-159 559.7
Cmo15g00736 CST 1521 1909 C2H2 Transcription Factor Family AT5G09740 62.4 1.4e-126 450.3
Cmo15g01021 . 1 391 C2H2 Transcription Factor Family AT2G01650 52.8 6.2e-106 381.7
Cmo04g02213 . 1 389 C2H2 Transcription Factor Family AT2G01650 52.0 1.2e-104 377.5
Cmo09g00104 CST 30 411 C2H2 Transcription Factor Family AT1G75710 65.7 2.9e-134 476.1
Cmo02g00760 . 1 383 C2H2 Transcription Factor Family AT2G29660 52.7 2.1e-98 356.7
Cmo20g00383 . 56 363 C2H2 Transcription Factor Family AT2G29660 57.5 7.7e-93 338.2
Cmo16g00873 . 1 392 C2H2 Transcription Factor Family AT4G27240 62.9 1.0e-128 457.6
Cmo01g01211 CST 8 439 C2H2 Transcription Factor Family AT4G27240 54.6 3.2e-119 426.0
Cmo09g00914 CST 1 437 C2H2 Transcription Factor Family AT4G27240 52.5 1.7e-112 403.7
Cmo04g02449 CST 196 397 C2H2 Transcription Factor Family AT4G27240 52.6 4.5e-52 203.0
Cmo15g00715 CST 167 375 C2H2 Transcription Factor Family AT4G27240 51.4 3.8e-51 199.9
Cmo16g00873 . 1 420 C2H2 Transcription Factor Family AT5G54630 64.2 1.7e-150 530.0
Cmo01g01211 CST 10 444 C2H2 Transcription Factor Family AT5G54630 61.4 1.3e-140 497.3
Cmo09g00914 CST 1 466 C2H2 Transcription Factor Family AT5G54630 56.5 4.6e-135 478.8
Cmo15g00715 CST 167 394 C2H2 Transcription Factor Family AT5G54630 50.2 3.4e-61 233.4
Cmo11g00142 CST 57 1612 C2H2 Transcription Factor Family AT3G47890 57.4 0.0e+00 1607.8
Cmo10g00186 CST 203 1746 C2H2 Transcription Factor Family AT3G47890 55.9 0.0e+00 1541.2
Cmo11g00142 CST 1 1612 C2H2 Transcription Factor Family AT3G47910 56.8 0.0e+00 1672.5
Cmo10g00186 CST 139 1746 C2H2 Transcription Factor Family AT3G47910 54.3 0.0e+00 1567.4
Cmo16g01094 . 42 364 C2H2 Transcription Factor Family AT4G12240 64.2 5.2e-118 421.8
Cmo09g00241 . 48 412 C2H2 Transcription Factor Family AT5G52010 67.6 2.1e-133 473.0
Cmo06g00436 CCT,ECH 23 319 C2H2 Transcription Factor Family AT5G03740 51.5 3.2e-41 166.4
Cmo10g00861 . 1 105 C2H2 Transcription Factor Family AT3G02790 81.9 7.6e-46 180.3
Cmo11g00962 . 1 104 C2H2 Transcription Factor Family AT3G02790 78.1 4.3e-41 164.5
Cmo10g00861 . 1 105 C2H2 Transcription Factor Family AT5G16470 79.2 1.7e-42 169.1
Cmo11g00962 . 1 104 C2H2 Transcription Factor Family AT5G16470 76.4 2.3e-39 158.7
Cmo07g01365 . 287 520 C2H2 Transcription Factor Family AT3G57480 61.9 5.9e-81 298.1
Cmo03g00069 . 308 535 C2H2 Transcription Factor Family AT3G57480 57.4 2.7e-78 289.3
Cmo03g00069 . 308 536 C2H2 Transcription Factor Family AT2G41835 64.9 4.7e-87 318.5
Cmo07g01365 . 287 521 C2H2 Transcription Factor Family AT2G41835 66.5 2.6e-85 312.8
Cmo10g00077 . 34 278 C2H2 Transcription Factor Family AT5G63280 60.3 4.7e-92 335.1
Cmo14g00711 CST 1 279 C2H2 Transcription Factor Family AT5G63280 53.7 3.2e-88 322.4
Cmo11g01644 CST 5 283 C2H2 Transcription Factor Family AT5G63280 52.5 3.1e-83 305.8
Cmo18g00853 . 54 618 C2H2 Transcription Factor Family AT3G12270 54.7 1.1e-173 607.4
Cmo04g01389 . 52 617 C2H2 Transcription Factor Family AT3G12270 52.4 5.3e-160 562.0
Cmo04g02162 . 9 322 C2H2 Transcription Factor Family AT1G01350 73.0 1.7e-131 466.5
Cmo15g00893 . 15 187 C2H2 Transcription Factor Family AT5G61190 78.0 1.1e-75 282.7
Cmo10g01261 . 23 300 C2H2 Transcription Factor Family AT5G26610 69.6 3.7e-77 285.8
Cmo06g01150 . 380 903 C2H2 Transcription Factor Family AT1G01930 51.6 6.5e-139 491.9
Cmo09g01077 . 46 360 C2H2 Transcription Factor Family AT1G43860 59.2 3.2e-106 382.5
Cmo09g00952 CST 164 371 C2H2 Transcription Factor Family AT1G50670 77.9 1.1e-93 340.1
Cmo01g01181 CST 107 314 C2H2 Transcription Factor Family AT1G50670 77.4 1.5e-93 339.7
Cmo11g01620 . 95 486 C2H2 Transcription Factor Family AT1G55460 70.5 3.3e-161 565.5
Cmo12g01048 . 4 148 C2H2 Transcription Factor Family AT3G05760 77.9 7.9e-60 227.3
Cmo06g00400 CST 1 228 C2H2 Transcription Factor Family AT2G32600 88.2 1.0e-113 407.1
Cmo18g01342 . 1 508 C2H2 Transcription Factor Family AT5G06160 73.7 4.4e-216 748.0
Cmo12g00797 . 19 511 C2H2 Transcription Factor Family AT2G27760 52.5 5.6e-141 498.4
Cmo07g00929 . 3 118 C2H2 Transcription Factor Family AT2G36930 75.0 2.4e-48 189.5
Cmo08g00933 . 91 411 C2H2 Transcription Factor Family AT1G04850 73.7 6.9e-106 381.3
Cmo05g00703 . 1 311 C2H2 Transcription Factor Family AT1G04850 52.4 2.9e-64 243.0
Cmo01g01596 CST 1 392 C2H2 Transcription Factor Family AT4G31420 63.9 1.6e-128 456.8
Cmo09g00513 CST 1 392 C2H2 Transcription Factor Family AT4G31420 55.4 1.3e-125 447.2
Cmo17g00694 . 111 260 C2H2 Transcription Factor Family AT2G02080 82.0 1.0e-72 271.6
Cmo14g00196 CCT,CST,ECH 61 209 C2H2 Transcription Factor Family AT2G02080 79.9 1.4e-72 271.2
Cmo08g00317 . 54 264 C2H2 Transcription Factor Family AT2G02080 62.2 1.8e-72 270.8
Cmo08g00742 . 65 205 C2H2 Transcription Factor Family AT2G02080 83.7 1.5e-71 267.7
Cmo07g00978 CCT,ECH 48 226 C2H2 Transcription Factor Family AT2G02080 68.1 2.0e-71 267.3
Cmo01g00064 . 80 229 C2H2 Transcription Factor Family AT2G02080 78.7 4.4e-71 266.2
Cmo01g01780 . 46 182 C2H2 Transcription Factor Family AT2G02080 84.7 7.5e-71 265.4
Cmo03g00791 CCT,CST,ECH 56 194 C2H2 Transcription Factor Family AT2G02080 81.3 7.5e-71 265.4
Cmo07g00500 CCT,CST,ECH 549 687 C2H2 Transcription Factor Family AT2G02080 81.3 9.7e-71 265.0
Cmo01g01957 CCT,CST,ECH 58 201 C2H2 Transcription Factor Family AT2G02080 76.4 3.7e-70 263.1
Cmo14g01296 . 65 209 C2H2 Transcription Factor Family AT2G02080 80.0 1.8e-69 260.8
Cmo20g00655 CCT,CST 40 178 C2H2 Transcription Factor Family AT2G02080 81.3 2.4e-69 260.4
Cmo17g01183 . 55 210 C2H2 Transcription Factor Family AT2G02080 74.4 3.1e-69 260.0
Cmo09g00165 CCT,CST,ECH 59 202 C2H2 Transcription Factor Family AT2G02080 75.7 5.3e-69 259.2
Cmo11g01874 CCT 52 203 C2H2 Transcription Factor Family AT2G02080 77.6 9.1e-69 258.5
Cmo16g00708 CCT,ECH 52 189 C2H2 Transcription Factor Family AT2G02080 79.7 1.2e-68 258.1
Cmo03g00793 . 52 189 C2H2 Transcription Factor Family AT2G02080 79.7 1.2e-68 258.1
Cmo12g00430 CCT,ECH 57 190 C2H2 Transcription Factor Family AT2G02080 79.1 2.2e-67 253.8
Cmo06g00365 CCT,CST,ECH 57 260 C2H2 Transcription Factor Family AT2G02080 57.8 8.0e-65 245.4
Cmo11g01172 . 61 199 C2H2 Transcription Factor Family AT2G02080 75.5 2.6e-63 240.4
Cmo13g01208 . 55 186 C2H2 Transcription Factor Family AT2G02080 59.1 2.0e-47 187.6
Cmo01g00783 . 52 206 C2H2 Transcription Factor Family AT2G02080 53.5 4.4e-47 186.4
Cmo15g00913 CST 83 216 C2H2 Transcription Factor Family AT2G02080 58.2 6.4e-46 182.6
Cmo13g01006 CST 52 215 C2H2 Transcription Factor Family AT2G02080 50.6 3.2e-45 180.3
Cmo18g00067 CST 47 181 C2H2 Transcription Factor Family AT2G02080 54.1 8.6e-43 172.2
Cmo04g02246 CST 57 178 C2H2 Transcription Factor Family AT2G02080 59.8 3.3e-42 170.2
Cmo04g01412 . 18 254 C2H2 Transcription Factor Family AT3G07940 60.8 7.1e-72 268.1
Cmo18g00872 . 14 239 C2H2 Transcription Factor Family AT3G07940 60.2 1.9e-69 260.0
Cmo15g00846 . 1 288 C2H2 Transcription Factor Family AT3G07940 55.5 7.4e-69 258.1
Cmo04g02315 . 8 282 C2H2 Transcription Factor Family AT3G07940 54.2 9.0e-67 251.1
Cmo07g00063 CCT,CST 3 327 C2H2 Transcription Factor Family AT4G05330 72.9 2.4e-141 499.2
Cmo03g01445 CCT,CST 3 319 C2H2 Transcription Factor Family AT4G05330 75.1 7.1e-138 487.6
Cmo13g00522 CCT,CST 1 333 C2H2 Transcription Factor Family AT4G05330 67.9 9.9e-132 467.2
Cmo18g00486 CCT,CST 1 325 C2H2 Transcription Factor Family AT4G05330 64.3 2.5e-127 452.6
Cmo07g00063 CCT,CST 3 327 C2H2 Transcription Factor Family AT4G21160 74.5 2.1e-142 502.7
Cmo03g01445 CCT,CST 3 319 C2H2 Transcription Factor Family AT4G21160 73.9 7.1e-138 487.6
Cmo13g00522 CCT,CST 1 333 C2H2 Transcription Factor Family AT4G21160 69.7 3.6e-134 475.3
Cmo18g00486 CCT,CST 1 325 C2H2 Transcription Factor Family AT4G21160 66.5 4.9e-131 464.9
Cmo09g01076 . 1 906 C2H2 Transcription Factor Family AT1G43850 56.9 1.9e-222 770.0
Cmo15g00639 CST 1 900 C2H2 Transcription Factor Family AT1G43850 58.5 7.3e-211 731.5
Cmo01g01061 . 1 908 C2H2 Transcription Factor Family AT1G43850 55.1 9.6e-211 731.1
Cmo04g02535 CST 1 907 C2H2 Transcription Factor Family AT1G43850 56.2 2.1e-189 660.2
Cmo15g01487 CCT,ECH 276 562 C2H2 Transcription Factor Family AT1G43850 57.1 5.3e-92 336.7
Cmo02g01058 . 301 587 C2H2 Transcription Factor Family AT1G43850 56.4 3.8e-90 330.5
Cmo16g00152 CCT,CST,ECH 276 559 C2H2 Transcription Factor Family AT1G43850 57.7 9.3e-89 325.9
Cmo07g00890 . 1 173 C2H2 Transcription Factor Family AT3G52800 58.0 1.0e-47 187.2
Cmo02g01365 . 1 167 C2H2 Transcription Factor Family AT3G52800 52.3 5.7e-43 171.4
Cmo20g00181 . 1 166 C2H2 Transcription Factor Family AT3G52800 51.2 1.7e-42 169.9
Cmo10g00077 . 10 204 C2H2 Transcription Factor Family AT5G40710 55.4 8.2e-64 241.1
Cmo14g00711 CST 54 202 C2H2 Transcription Factor Family AT5G40710 65.8 5.3e-63 238.4
Cmo11g01644 CST 5 206 C2H2 Transcription Factor Family AT5G40710 52.4 7.2e-60 228.0
Cmo04g02221 . 39 169 C2H2 Transcription Factor Family AT1G70790 60.2 1.2e-41 166.8
Cmo14g00852 . 38 165 C2H2 Transcription Factor Family AT1G70790 59.2 1.8e-40 162.9
Cmo04g00055 . 40 167 C2H2 Transcription Factor Family AT1G70790 54.6 1.7e-38 156.4
Cmo18g00057 CST 38 165 C2H2 Transcription Factor Family AT1G70790 54.6 1.4e-37 153.3
Cmo11g00319 . 54 180 C2H2 Transcription Factor Family AT1G70790 57.4 3.1e-37 152.1
Cmo14g01672 CST 74 469 C2H2 Transcription Factor Family AT5G18550 59.5 1.8e-56 217.6
Cmo04g02065 . 16 620 C2H2 Transcription Factor Family AT5G39550 62.3 2.9e-222 768.8
Cmo15g00343 CST 4 332 C2H2 Transcription Factor Family AT5G40310 64.3 2.3e-131 466.1
Cmo04g02842 CST 5 326 C2H2 Transcription Factor Family AT5G40310 61.9 1.7e-126 449.9
Cmo12g00651 . 26 311 C2H2 Transcription Factor Family AT5G20220 65.6 8.7e-98 354.8
Cmo10g00859 . 28 299 C2H2 Transcription Factor Family AT5G16540 55.2 9.0e-59 224.6
Cmo11g00965 . 28 310 C2H2 Transcription Factor Family AT5G16540 52.8 1.5e-58 223.8
Cmo01g00971 . 226 507 C2H2 Transcription Factor Family AT1G34370 69.8 2.1e-114 409.5
Cmo09g01158 . 224 503 C2H2 Transcription Factor Family AT1G34370 68.3 3.1e-110 395.6
Cmo03g00851 . 103 323 C2H2 Transcription Factor Family AT1G34370 52.7 1.1e-62 237.7
Cmo13g00264 . 151 315 C2H2 Transcription Factor Family AT1G34370 60.6 4.8e-58 222.2
Cmo11g00287 CST 43 1246 C2H2 Transcription Factor Family AT3G18290 69.5 0.0e+00 1673.3
Cmo10g00326 CST 43 1246 C2H2 Transcription Factor Family AT3G18290 68.5 0.0e+00 1647.1
Cmo04g01568 . 41 1228 C2H2 Transcription Factor Family AT3G18290 60.9 0.0e+00 1407.1
Cmo13g00465 . 10 489 C2H2 Transcription Factor Family AT5G22480 75.8 3.7e-212 734.9
Cmo09g00663 CST 7 328 C2H2 Transcription Factor Family AT3G14740 54.8 8.9e-104 374.4
Cmo01g01329 CST 7 347 C2H2 Transcription Factor Family AT3G14740 55.8 3.4e-103 372.5
Cmo16g00239 . 26 217 C2H2 Transcription Factor Family AT5G07500 53.1 2.9e-56 216.1
Cmo04g01178 CST,ECH 177 317 C2H2 Transcription Factor Family AT5G07500 56.7 3.2e-47 186.0
Cmo01g00238 CST 239 359 C2H2 Transcription Factor Family AT5G07500 62.8 3.2e-47 186.0
Cmo02g00746 CST 168 319 C2H2 Transcription Factor Family AT5G07500 54.6 3.2e-47 186.0
Cmo04g00148 CST,ECH 212 332 C2H2 Transcription Factor Family AT5G07500 62.8 5.5e-47 185.3
Cmo14g01019 CST 239 359 C2H2 Transcription Factor Family AT5G07500 62.0 1.2e-46 184.1
Cmo14g00457 CST 214 334 C2H2 Transcription Factor Family AT5G07500 62.0 1.6e-46 183.7
Cmo06g00067 CST 209 338 C2H2 Transcription Factor Family AT5G07500 57.7 6.1e-46 181.8
Cmo11g01994 . 90 196 C2H2 Transcription Factor Family AT5G07500 69.2 1.8e-45 180.3
Cmo12g01319 CCT,ECH 73 205 C2H2 Transcription Factor Family AT5G07500 60.4 2.3e-45 179.9
Cmo19g01036 . 66 172 C2H2 Transcription Factor Family AT5G07500 69.2 6.7e-45 178.3
Cmo01g01815 . 25 149 C2H2 Transcription Factor Family AT5G07500 60.6 8.8e-45 177.9
Cmo20g00367 CST 198 318 C2H2 Transcription Factor Family AT5G07500 61.2 8.8e-45 177.9
Cmo09g00324 CCT,ECH 68 174 C2H2 Transcription Factor Family AT5G07500 67.3 7.4e-44 174.9
Cmo10g00717 CCT,ECH 62 195 C2H2 Transcription Factor Family AT5G07500 56.0 7.4e-44 174.9
Cmo11g00683 . 92 198 C2H2 Transcription Factor Family AT5G07500 65.4 1.3e-43 174.1
Cmo12g00560 . 31 173 C2H2 Transcription Factor Family AT5G07500 54.5 9.1e-42 167.9
Cmo05g00118 CCT,ECH 56 172 C2H2 Transcription Factor Family AT5G07500 59.3 2.0e-41 166.8
Cmo01g00238 CST 1 722 C2H2 Transcription Factor Family AT5G12850 51.0 8.6e-186 647.9
Cmo14g00457 CST 7 699 C2H2 Transcription Factor Family AT5G12850 51.7 8.0e-184 641.3
Cmo11g00683 . 86 200 C2H2 Transcription Factor Family AT5G12850 68.7 2.4e-50 198.0
Cmo10g00717 CCT,ECH 83 236 C2H2 Transcription Factor Family AT5G12850 56.2 6.8e-50 196.4
Cmo09g00324 CCT,ECH 68 176 C2H2 Transcription Factor Family AT5G12850 69.7 2.9e-48 191.0
Cmo12g01319 CCT,ECH 99 220 C2H2 Transcription Factor Family AT5G12850 65.6 8.4e-48 189.5
Cmo11g01994 . 90 200 C2H2 Transcription Factor Family AT5G12850 67.6 1.1e-47 189.1
Cmo19g01036 . 66 176 C2H2 Transcription Factor Family AT5G12850 67.6 2.4e-47 188.0
Cmo01g01815 . 43 151 C2H2 Transcription Factor Family AT5G12850 68.8 4.1e-47 187.2
Cmo16g00239 . 39 149 C2H2 Transcription Factor Family AT5G12850 62.2 1.2e-43 175.6
Cmo12g00560 . 67 217 C2H2 Transcription Factor Family AT5G12850 51.6 3.6e-43 174.1
Cmo14g00638 . 31 208 C2H2 Transcription Factor Family AT3G28210 60.8 3.5e-62 235.3
Cmo11g00813 . 54 753 C2H2 Transcription Factor Family AT2G27100 62.9 2.7e-219 759.2
Cmo10g01033 . 32 560 C2H2 Transcription Factor Family AT2G27100 67.2 2.6e-198 689.5
Cmo07g00450 CCT,CST,ECH 91 273 C2H2 Transcription Factor Family AT5G66350 52.6 6.8e-53 205.3
Cmo12g00381 CCT,CST,ECH 55 258 C2H2 Transcription Factor Family AT5G66350 52.9 1.9e-47 187.2
Cmo16g00699 CCT,ECH 59 196 C2H2 Transcription Factor Family AT5G66350 53.7 5.1e-40 162.5
Cmo03g00734 CCT,CST,ECH 100 245 C2H2 Transcription Factor Family AT2G21400 54.0 4.7e-38 155.2
Cmo19g00311 . 74 197 C2H2 Transcription Factor Family AT2G21400 57.5 2.3e-37 152.9
Cmo12g00381 CCT,CST,ECH 56 185 C2H2 Transcription Factor Family AT2G21400 56.0 1.5e-36 150.2
Cmo03g00734 CCT,CST,ECH 101 247 C2H2 Transcription Factor Family AT2G18120 53.7 5.8e-40 161.8
Cmo07g00450 CCT,CST,ECH 92 219 C2H2 Transcription Factor Family AT2G18120 55.9 2.2e-39 159.8
Cmo03g00734 CCT,CST,ECH 99 323 C2H2 Transcription Factor Family AT1G75520 52.2 3.5e-55 213.0
Cmo04g00822 . 73 201 C2H2 Transcription Factor Family AT1G75520 52.1 1.5e-37 154.5
Cmo03g00734 CCT,CST,ECH 99 323 C2H2 Transcription Factor Family AT3G51060 63.1 2.3e-65 246.9
Cmo07g00450 CCT,CST,ECH 91 282 C2H2 Transcription Factor Family AT3G51060 51.1 4.1e-54 209.5
Cmo16g00699 CCT,ECH 71 250 C2H2 Transcription Factor Family AT3G51060 53.0 3.0e-41 166.8
Cmo04g00822 . 80 200 C2H2 Transcription Factor Family AT3G51060 59.0 8.9e-41 165.2
Cmo03g00734 CCT,CST,ECH 101 251 C2H2 Transcription Factor Family AT4G36260 53.4 3.1e-42 169.9
Cmo07g00450 CCT,CST,ECH 92 224 C2H2 Transcription Factor Family AT4G36260 52.8 1.0e-40 164.9
Cmo01g02001 CCT,ECH 85 232 C2H2 Transcription Factor Family AT4G36260 55.1 1.8e-37 154.1
Cmo05g00287 CCT,CST,ECH 106 266 C2H2 Transcription Factor Family AT4G36260 57.6 8.8e-37 151.8
Cmo04g01395 . 1721 1873 C2H2 Transcription Factor Family AT1G72050 51.6 3.5e-41 166.4
Cmo07g01338 . 107 304 C2H2 Transcription Factor Family AT1G34790 68.5 2.4e-84 309.7
Cmo03g00099 . 99 296 C2H2 Transcription Factor Family AT1G34790 68.5 9.1e-84 307.8
Cmo20g00081 CST 116 285 C2H2 Transcription Factor Family AT1G34790 77.1 1.5e-83 307.0
Cmo02g01279 CST 169 338 C2H2 Transcription Factor Family AT1G34790 77.1 2.0e-83 306.6
Cmo06g00072 CST 146 316 C2H2 Transcription Factor Family AT1G34790 74.3 2.2e-82 303.1
Cmo14g00447 CST 151 311 C2H2 Transcription Factor Family AT1G34790 78.3 1.9e-81 300.1
Cmo04g02100 . 107 267 C2H2 Transcription Factor Family AT1G34790 77.0 1.4e-79 293.9
Cmo17g00925 . 107 282 C2H2 Transcription Factor Family AT1G34790 72.7 5.1e-79 292.0
Cmo11g00965 . 28 393 C2H2 Transcription Factor Family AT3G02830 53.8 4.7e-74 275.8
Cmo10g00859 . 28 398 C2H2 Transcription Factor Family AT3G02830 54.1 6.2e-74 275.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000024 10 17 6 10 10 12 10 11 13 12 12 12 20 13 13 19 13 19 19 12 14 12 15 15 15 13 15 22 23 11 418
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11434 PF12171 zf-C2H2_jaz 5.80E-05 CL0361 Cmo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo17g01183 Cmo_Chr17 FPKM 1.108602 0.956945 0.999437 1.001332 1.187846 2.04245 1.470661 0.0 0.0 0.0