Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g01287 ATGGCGGAACTGGAGAATTCAAGATTTCTACTGCCACAAACAATGCAACACGAGGACGAAGCTCAAGCACAGGACCTAGAAAGCCAAACTTCTGGGTTTACGCAAGAATTATTTCCCTCCAGCGATTCAAGCTTCTGTACAACAACTTTTGATCTTCTCATTGCTTTTGCATACAGAATCATACGCTCATGTTCGCGTAGCTACGTTTCGGACATTCATCTTGGGAGTCGGAATGGTACTGATTATGTTATGGCTATTGATGGCGCTCTAGATTACTCCGATATTAAGCGACCAATCCAATCTACGATGCACAAGCTTCGAGCTCCAAATGCTGGATATAAAAAGCTTTGTTTATCTAATGACAATCCTGTGAATATCGTTGTTGGTTCTCACATATGGGTGGGAGATATCGAGTCTGTTTGGATTGATGGACTCGTATTGAACATCATTGGGGAAGATGCTGAGATTCAAACTAGTGATGGGAGGCAGGTGTTGAAGGACAAAAAATGCTACCAAATAGAGATTAATCATGAAAATAATGAACTCTTAGACTGTTTCCTTGCCTCACATTTTAGGGTGGTTGTAAAAATGTCGAATCTATATCCAAGGGATGCAGAAGCTCCTGCTACTGGAATTGACGATATGACTAGAATGTCGTATTTGAATGAGCCTGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTATACTGGAAATATTCTTATTGCCATCAACCCATTCCAAAGTATTTCAAATCTGTATGATCCGTGTGTGATGGAGCAGTACAAGGGAGCACCAGTGGGGGAGCTGAAGCCTCATGTTTTTGCAATTGCTGATGTCGCATATAGGGCTATGATAACTAATGGGAAAAGCAACTCTATTCTGGTAAGTGGTGAAAGTGGGGCTGGTAAGACTGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCAAGGCTGCATCTGAAGGACGGTCTGTTCAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTTAGAAACAACAATTCAAGCCGTTTTGGGAAATTTGTTGAGATCCAATTTGACAAGAAGGGAAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGAGTTTGCCAAATATCAGACCCTGAGCGCAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGGTATAAACTGGGAAATCCGAAATCATTTCACTATCTAAATCAATCAAATTGTTATGAGCTGGCTGGTGTGAATGATGCTCATGATTATCTTGCCACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGTGATACCTTACTCGAGATGTAGCTATTCTTTTGTGCTGTGTCAACCTACTGCTAAATGCCTTCTCTTCCCCTTTCCTCGTTCTTCCTTTCAGGATGCAATTTTCCGAGTTGTGGCTGCAATACTCCATCTTGGTAATGTTGACTTTGCAAAAGGAGAGGAGTCTGATTCATCATTTATAAAAGATGAAGAATCAAAATTTCATCTTCAAATGACAGCAGAGCTTCTCATGTGTGATCCCAATGCATTAGAAGATGCTCTTTGCAAGCGCATTATGATTACACGGGAGGAAATCATCAAGAGAAGTCTTGATCCGCTTGGTGCAACTGTTAGCAGGGATGGATTAGCCAAGACAATATATTCTCGAATTATTACAGTCGGTAGTTTATCTTATCCAGGTAAAATCAATGTTTCCATTGGGCAAGATCATGGCTCGGAATATCTGATCGGAGTACTTGATATTTATGGTTTTGAAAGCTTTAAAACAAATAGTTTTGAGCAATTCTGCATCAATTACACAAATGAAAAGCTGCAGCAACATTTCAACCAGCACGTATTCAAGATGGAGCAAGAAGAATATGTCAAAGAGGAAATTGATTGGAGCTACATAGAATTTGTTGATAATCAAGATGTCCTTGATCTAATTGAGAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGGTATGCTCATTCTTTTACCTCTTATTGGCGTCAGTATTTGAAGTCTAAGATGGTTATAAATCCATCAACCGGTTCACAATGCGGATTGAACTCAAGAACTGCTGGTGAAGGTCTTAAGAAGCAAAGGATGTTAACAACTAGATCATACCAGAAGCGTACTGCTTTTTAA 2250 40.04 MAELENSRFLLPQTMQHEDEAQAQDLESQTSGFTQELFPSSDSSFCTTTFDLLIAFAYRIIRSCSRSYVSDIHLGSRNGTDYVMAIDGALDYSDIKRPIQSTMHKLRAPNAGYKKLCLSNDNPVNIVVGSHIWVGDIESVWIDGLVLNIIGEDAEIQTSDGRQVLKDKKCYQIEINHENNELLDCFLASHFRVVVKMSNLYPRDAEAPATGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISNLYDPCVMEQYKGAPVGELKPHVFAIADVAYRAMITNGKSNSILVSGESGAGKTETTKMLMCYLAFLGGKAASEGRSVQQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQVIPYSRCSYSFVLCQPTAKCLLFPFPRSSFQDAIFRVVAAILHLGNVDFAKGEESDSSFIKDEESKFHLQMTAELLMCDPNALEDALCKRIMITREEIIKRSLDPLGATVSRDGLAKTIYSRIITVGSLSYPGKINVSIGQDHGSEYLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEAWYAHSFTSYWRQYLKSKMVINPSTGSQCGLNSRTAGEGLKKQRMLTTRSYQKRTAF 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 10110730 10126413 + CmoCh17G012870.1 Cmo17g01287 401670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g01287 749 PRINTS Myosin heavy chain signature 240 259 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 PRINTS Myosin heavy chain signature 297 322 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 PRINTS Myosin heavy chain signature 612 640 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 PRINTS Myosin heavy chain signature 665 693 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 PRINTS Myosin heavy chain signature 344 371 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 PANTHER MYOSIN-9 124 167 - -
Cmo17g01287 749 PANTHER MYOSIN-9 190 464 - -
Cmo17g01287 749 SMART MYSc_2a 204 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 ProSiteProfiles Myosin motor domain profile. 210 749 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 Gene3D - 629 731 - -
Cmo17g01287 749 Pfam Myosin head (motor domain) 213 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 Pfam Myosin head (motor domain) 494 708 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cmo17g01287 749 Gene3D Kinesin motor domain 187 484 IPR036961 -
Cmo17g01287 749 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 699 IPR027417 -
Cmo17g01287 749 Gene3D Myosin VI head, motor domain, U50 subdomain 493 628 - -
Cmo17g01287 749 PANTHER MYOSIN-9 495 694 - -
Cmo17g01287 749 PANTHER MYOSIN 124 167 - -
Cmo17g01287 749 PANTHER MYOSIN 190 464 - -
Cmo17g01287 749 PANTHER MYOSIN 495 694 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g01287 Cmo-Chr17:10110730 Cmo12g01162 Cmo-Chr12:10512698 0 dispersed
Cmo17g01287 Cmo-Chr17:10110730 Cmo08g00267 Cmo-Chr8:1647323 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g01287 K10357 - pda:103704019 813.527