Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g01339 ATGGATAGTTGGGTGACAGCACTTGGCGCCCTCGCCATCGGCGCAGTCTTCCATTTTGTGTTGAGTCGTATCTTGTGGCGCAAACAAAAGCTCCCTCCTGGTCCGCTTGCCTTGCCGCTCATAGGCAACCCCATATGGCTCTTCAAGCCACTTTCCGAGCTGGAAGCCACCCTCCGCCATTACCATTCCAAATACGGTCCAGTAATCACCCTCCACTTCGGCAACACTCCTTCCATTTTCATCGCCAGCCACTCTGCCGCTCACCAGGCCTTGGTTCAAAACGGCGCTGTCTTCGCAGACCGCTTCCCTATCATGGAGACTGTCAAAATCATCACCAGCAACCAACGCAACATCAGCACCTCCTTCTACGGCCCCACCTGGCGCATCCTCCGCCGCAATCTCACCTCCGAGCTCCTCCATCCATCTCGCTTGAAGGCTCACTCCCCTTCTCGCAAATGGGTCTTGGACGATCTCCTCCATCGCCTCATCCAACATTCCCACCCCACCTCCCCTGCCCAATCCCCTGTTCCTGTAACAGTCGTGGACCATCTTCGCCACGCCATGTTTAGCCTGGCTGCCGCTATGTGTTTTGGGGAGAGATTCGACGCCAAATTAATCAATGAAATACAAGAATCTCAACGTGGGGTTTTGTTGAACATCGGTAAATTCAATGATCTTAACTTCTGGCCTCCGAAATTGGGGAAAATTTTGTTCCGGAAGCGTTGGGAAGAGATTCGTCAGCTACGTAAGCGGCAAGACAGTTTGCTACTTCCATTGATCAATGCAAGAAAGAAGATAGTCAAAGAGAAGGGCGGATCAGGTGCTGGGAATAAGAACCCGATTCCGTACGTTGATACTCTGTTTGATTTAGAAATTGCAGAGAACAACGACGAGAAGAGGAAGAGAAAATTGGTGGAAGATGAACTGATAACTTTATGCACAGAGTTCATCGACGCCATCACGGACACTACGGTGGTGTCAGTGCAATGGATAATGGCGAATTTGGTGAAATACCCAGAAATTCAAGAGAAGCTGTTCAAGGAAATGAAAGAAGTGATGGGAGAGAGTGCGAAGGAGGAGATAGAAGAGGAGGATTTGCAGAAGATGACATATCTGAAAGCCGTAGTGCTTGAAGGGCTGCGGCGGCACCCGCCGGGGCATCTGCTGCTGCCTCATACAGTGACAGAGGACAGTGTTGTGGAGGGCGGATACAGGGTGCCAAAAGGAACGTCGGTGAACTTTATGGTTGCCGACATGGGTTGGGACCCGAAGGTGTGGCCGGATCCGATGGCGTTCAAGCCGGAGAGATTCTTGACGGATAGGTCGGAGGGTGGGGTTGAGGTGGAAGTTGATATCACAGGGAGTAAGGAAATAAAGATGATGCCGTTCGGGGCTGGGAGGAGGTTCTGCCCGGGATTCGCTTTGGGGTTGCTGCATTTGGAGTACTTCGTTGGGAATTTGGTGTGGAACTTCAAGTGGACGGCTGCCGGAGATGTTGATCTGTCTGAGAAGCTGGAATCTGCTGTCACTATGAAACAACCGCTGCTCTCCTACTTGTCGCCGAGGGCGGTTTCTAGTTAG 1581 51.74 MDSWVTALGALAIGAVFHFVLSRILWRKQKLPPGPLALPLIGNPIWLFKPLSELEATLRHYHSKYGPVITLHFGNTPSIFIASHSAAHQALVQNGAVFADRFPIMETVKIITSNQRNISTSFYGPTWRILRRNLTSELLHPSRLKAHSPSRKWVLDDLLHRLIQHSHPTSPAQSPVPVTVVDHLRHAMFSLAAAMCFGERFDAKLINEIQESQRGVLLNIGKFNDLNFWPPKLGKILFRKRWEEIRQLRKRQDSLLLPLINARKKIVKEKGGSGAGNKNPIPYVDTLFDLEIAENNDEKRKRKLVEDELITLCTEFIDAITDTTVVSVQWIMANLVKYPEIQEKLFKEMKEVMGESAKEEIEEEDLQKMTYLKAVVLEGLRRHPPGHLLLPHTVTEDSVVEGGYRVPKGTSVNFMVADMGWDPKVWPDPMAFKPERFLTDRSEGGVEVEVDITGSKEIKMMPFGAGRRFCPGFALGLLHLEYFVGNLVWNFKWTAAGDVDLSEKLESAVTMKQPLLSYLSPRAVSS 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 10477015 10478595 + CmoCh17G013390.1 Cmo17g01339 401722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g01339 526 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 521 - -
Cmo17g01339 526 SUPERFAMILY Cytochrome P450 24 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 PANTHER CYTOCHROME P450 9 521 - -
Cmo17g01339 526 Pfam Cytochrome P450 32 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01339 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Cmo17g01339 526 Gene3D Cytochrome P450 26 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g01339 Cmo-Chr17:10477015 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo17g01339 Cmo-Chr17:10477015 Cmo02g01117 Cmo-Chr2:6793022 6.29E-173 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g01339 K24184 - csv:101204774 787.719