Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g01340 | ATGGAAACCAGCAGCTATGTTGCAGCGTTGATTACTTTCTTGGCTGTGGGTTCCATTTTTTTGTTGCAGAAAAGAAAAAACAGAGCCAAAAATCTCCCGCCGACTCCCTGGGCTCTGCCCATCCTGGGTCATCTTCATCTCCTCAAGCACCCAGTCCACAGAACTTTACAGTCCCTCGCCCAAAAACACGGCCCAATTTTCACTCTCCGCCTCGGCTCCCGTCTCGCCGTCGTCGTATCATCGGCACCAGCCGTCGAAGAATGCTTCACCACAAACGACATCGTTTTCGCTAACCGCCCTCAATTCGTTTCCGGCATGTACCTCAGCTACGGCAACACCACGATGGGGGCTGCCCCGTACGGCGATCACTGGCGCAATCTAAGGCGCTTGAGCTCCACAGAAATCTTGTCGTCGATTCGCCTCAACATGTCGGCCGGTATCCGAAAGGAAGAAGTTAACATTTTACTCCGCAAATTGTATCAATTTTCGAGGCATGATTTTGGGAAAGTGAAATTGAAAACCCTGTTTTCGGAGCTGACATTCAACATAATTATGAGAATGGTGGCCGGAAAACGGTATTACGGGGACGAAGTGACGGAATTGGAAGAGGCGAAAGAGTTCCGACAAATTATGGAGACGTCGTTTCGATTGGGGTCGTACCCTGGTGATTTCTTACCATTCCTGAAGTGGGTTGATCGGCAATACCCCAAAAGGATGAAGAGTCTGGGCAGAGCCATAGATTCGTTGCTGCAGAATTTGGTGGATGAACACCGGAGATATCAAAATGAAGGGAAAAAGCTAGATACCATGATTAGCCATCTGCTCTGTTTGCAGGAGTCTCAGCCCGAGTATTACTCAGATGAAATTATCAAAGGCCTCATCGTTACAATTTTAACAGCAGCGACGGAAACATCGTCTGTGACGATAGAATGGGCAATGTCCAATCTACTCAACCATCCAGAGGCATTGAACAAGGCCAGAGCTGAACTTGACGCACAGATTGGGCAAGATCGGTTACTGGAAGAAGAAGACATCCCCAATCTGCCATACCTCCAGAACGTGATCTCAGAGACACTGCGCTTGTACCCAGCAGCTCCACTCTTGGCGCCACATTTTTCATCCGAGAGTTGTTCTCTGGGGGGATACCATATTCCTGCTGGCACTACCTTGTTGGTGAATGCGTGGGCGGTGCAAAGGGATCCCGAAGTTTGGGAGGACCCGACAAGCTTTAAACCTGAGAGGTTTGAGAGCGGGGGAGTGGCTGCCAACGCTTACAAATTCTTGCCGTTTGGATTGGGGAGGAGGGCTTGTCCTGGGATGGGCATGGCCAACCGTGTGGTGGGCTTGGCTTTGGGGTCGCTGATTCAGAGCTTTGAGTGGAAGAGGGAGAGCAGCGGTTGTTTCATAGTGACAGCAGATTCCAGCTTCTCAGACAGATCAACATCTCCGGCAGCCGTCCACTTGAAGTTCCACACCAAATTCCCAACGAAGTACTCCAAATGCAGCAACCCCAAAGCGAATCCCGGGCAGAACCTCCTCCCAGCCCCGAACGGCATCATCTTTATTTCCTTACTCCCTGTGATATCAACTTCCACCTCAACCCCACCCTCCGACCTATCCGTCAAGAATCTCTCCGGCTTGAACGCCATCGGATCCGGCCACACCTTCGGGTCCCAACCCATGTCGGCAACCATAAAGTTCACCGACGTTCCTTTTGGCACCCTGTATCCGCCCTCCACAACACTGTCCTCTGTCACTGTATGA | 1764 | 51.02 | METSSYVAALITFLAVGSIFLLQKRKNRAKNLPPTPWALPILGHLHLLKHPVHRTLQSLAQKHGPIFTLRLGSRLAVVVSSAPAVEECFTTNDIVFANRPQFVSGMYLSYGNTTMGAAPYGDHWRNLRRLSSTEILSSIRLNMSAGIRKEEVNILLRKLYQFSRHDFGKVKLKTLFSELTFNIIMRMVAGKRYYGDEVTELEEAKEFRQIMETSFRLGSYPGDFLPFLKWVDRQYPKRMKSLGRAIDSLLQNLVDEHRRYQNEGKKLDTMISHLLCLQESQPEYYSDEIIKGLIVTILTAATETSSVTIEWAMSNLLNHPEALNKARAELDAQIGQDRLLEEEDIPNLPYLQNVISETLRLYPAAPLLAPHFSSESCSLGGYHIPAGTTLLVNAWAVQRDPEVWEDPTSFKPERFESGGVAANAYKFLPFGLGRRACPGMGMANRVVGLALGSLIQSFEWKRESSGCFIVTADSSFSDRSTSPAAVHLKFHTKFPTKYSKCSNPKANPGQNLLPAPNGIIFISLLPVISTSTSTPPSDLSVKNLSGLNAIGSGHTFGSQPMSATIKFTDVPFGTLYPPSTTLSSVTV | 587 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 10478187 | 10480936 | - | CmoCh17G013400.1 | Cmo17g01340 | 401723 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g01340 | 587 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 8 | 490 | - | - | |
Cmo17g01340 | 587 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 393 | 417 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | E-class P450 group I signature | 352 | 370 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | Pfam | Cytochrome P450 | 33 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PANTHER | CYTOCHROME P450 | 8 | 490 | - | - | |
Cmo17g01340 | 587 | PRINTS | P450 superfamily signature | 353 | 364 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | Gene3D | Cytochrome P450 | 18 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g01340 | 587 | SUPERFAMILY | Cytochrome P450 | 33 | 465 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo17g01340 | Cmo-Chr17:10478187 | Cmo20g00988 | Cmo-Chr20:5633295 | 2.71E-171 | dispersed | |
Cmo17g01340 | Cmo-Chr17:10478187 | Cmo08g00037 | Cmo-Chr8:189769 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g01340 | - | K13260 | csv:101207828 | 718.383 |