Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g01340 ATGGAAACCAGCAGCTATGTTGCAGCGTTGATTACTTTCTTGGCTGTGGGTTCCATTTTTTTGTTGCAGAAAAGAAAAAACAGAGCCAAAAATCTCCCGCCGACTCCCTGGGCTCTGCCCATCCTGGGTCATCTTCATCTCCTCAAGCACCCAGTCCACAGAACTTTACAGTCCCTCGCCCAAAAACACGGCCCAATTTTCACTCTCCGCCTCGGCTCCCGTCTCGCCGTCGTCGTATCATCGGCACCAGCCGTCGAAGAATGCTTCACCACAAACGACATCGTTTTCGCTAACCGCCCTCAATTCGTTTCCGGCATGTACCTCAGCTACGGCAACACCACGATGGGGGCTGCCCCGTACGGCGATCACTGGCGCAATCTAAGGCGCTTGAGCTCCACAGAAATCTTGTCGTCGATTCGCCTCAACATGTCGGCCGGTATCCGAAAGGAAGAAGTTAACATTTTACTCCGCAAATTGTATCAATTTTCGAGGCATGATTTTGGGAAAGTGAAATTGAAAACCCTGTTTTCGGAGCTGACATTCAACATAATTATGAGAATGGTGGCCGGAAAACGGTATTACGGGGACGAAGTGACGGAATTGGAAGAGGCGAAAGAGTTCCGACAAATTATGGAGACGTCGTTTCGATTGGGGTCGTACCCTGGTGATTTCTTACCATTCCTGAAGTGGGTTGATCGGCAATACCCCAAAAGGATGAAGAGTCTGGGCAGAGCCATAGATTCGTTGCTGCAGAATTTGGTGGATGAACACCGGAGATATCAAAATGAAGGGAAAAAGCTAGATACCATGATTAGCCATCTGCTCTGTTTGCAGGAGTCTCAGCCCGAGTATTACTCAGATGAAATTATCAAAGGCCTCATCGTTACAATTTTAACAGCAGCGACGGAAACATCGTCTGTGACGATAGAATGGGCAATGTCCAATCTACTCAACCATCCAGAGGCATTGAACAAGGCCAGAGCTGAACTTGACGCACAGATTGGGCAAGATCGGTTACTGGAAGAAGAAGACATCCCCAATCTGCCATACCTCCAGAACGTGATCTCAGAGACACTGCGCTTGTACCCAGCAGCTCCACTCTTGGCGCCACATTTTTCATCCGAGAGTTGTTCTCTGGGGGGATACCATATTCCTGCTGGCACTACCTTGTTGGTGAATGCGTGGGCGGTGCAAAGGGATCCCGAAGTTTGGGAGGACCCGACAAGCTTTAAACCTGAGAGGTTTGAGAGCGGGGGAGTGGCTGCCAACGCTTACAAATTCTTGCCGTTTGGATTGGGGAGGAGGGCTTGTCCTGGGATGGGCATGGCCAACCGTGTGGTGGGCTTGGCTTTGGGGTCGCTGATTCAGAGCTTTGAGTGGAAGAGGGAGAGCAGCGGTTGTTTCATAGTGACAGCAGATTCCAGCTTCTCAGACAGATCAACATCTCCGGCAGCCGTCCACTTGAAGTTCCACACCAAATTCCCAACGAAGTACTCCAAATGCAGCAACCCCAAAGCGAATCCCGGGCAGAACCTCCTCCCAGCCCCGAACGGCATCATCTTTATTTCCTTACTCCCTGTGATATCAACTTCCACCTCAACCCCACCCTCCGACCTATCCGTCAAGAATCTCTCCGGCTTGAACGCCATCGGATCCGGCCACACCTTCGGGTCCCAACCCATGTCGGCAACCATAAAGTTCACCGACGTTCCTTTTGGCACCCTGTATCCGCCCTCCACAACACTGTCCTCTGTCACTGTATGA 1764 51.02 METSSYVAALITFLAVGSIFLLQKRKNRAKNLPPTPWALPILGHLHLLKHPVHRTLQSLAQKHGPIFTLRLGSRLAVVVSSAPAVEECFTTNDIVFANRPQFVSGMYLSYGNTTMGAAPYGDHWRNLRRLSSTEILSSIRLNMSAGIRKEEVNILLRKLYQFSRHDFGKVKLKTLFSELTFNIIMRMVAGKRYYGDEVTELEEAKEFRQIMETSFRLGSYPGDFLPFLKWVDRQYPKRMKSLGRAIDSLLQNLVDEHRRYQNEGKKLDTMISHLLCLQESQPEYYSDEIIKGLIVTILTAATETSSVTIEWAMSNLLNHPEALNKARAELDAQIGQDRLLEEEDIPNLPYLQNVISETLRLYPAAPLLAPHFSSESCSLGGYHIPAGTTLLVNAWAVQRDPEVWEDPTSFKPERFESGGVAANAYKFLPFGLGRRACPGMGMANRVVGLALGSLIQSFEWKRESSGCFIVTADSSFSDRSTSPAAVHLKFHTKFPTKYSKCSNPKANPGQNLLPAPNGIIFISLLPVISTSTSTPPSDLSVKNLSGLNAIGSGHTFGSQPMSATIKFTDVPFGTLYPPSTTLSSVTV 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 10478187 10480936 - CmoCh17G013400.1 Cmo17g01340 401723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g01340 587 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 490 - -
Cmo17g01340 587 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cmo17g01340 587 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 Pfam Cytochrome P450 33 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PANTHER CYTOCHROME P450 8 490 - -
Cmo17g01340 587 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 Gene3D Cytochrome P450 18 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g01340 587 SUPERFAMILY Cytochrome P450 33 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g01340 Cmo-Chr17:10478187 Cmo20g00988 Cmo-Chr20:5633295 2.71E-171 dispersed
Cmo17g01340 Cmo-Chr17:10478187 Cmo08g00037 Cmo-Chr8:189769 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g01340 - K13260 csv:101207828 718.383