Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00018 ATGGTGCTATTCGACAGAGGAAGCTTCAAAAGAACAATGCAGCAAGGGAAGGAGAGAGTAATGGCGACAATATCCGAGAAATTTTCGGCTGATTTTGCGATGGGTGGGGTTGCCGCGATTGTGGCCAAAACTGCAGCCGCACCCATTGAAAGGGTCAAGCTTTTGTTGCAGAATCAGGGGGAGTTGTTAAAGAGAGGTCATCTCAAGAACCCATATCTGGGCATTCATGATTGTTTCAGAAGAGTTTTGAAAGAAGAAGGGATATTGTCGCTTTGGAGGGGAAATCAGGCCAACGTTATTCGATATTTCCCAACTCAGGCTTTCAACTTTGCGTTCAAAGGTTACTTCAAAACCAAATTTGGGCGCTCAAAAGAGAAGGATGGATACATGAAGTGGTTTGCTGGAAATGTTGCTTCAGGAAGTGCTGCAGGAGCATCTACATCTTTGTTTCTGTATCATTTGGATTATGCACGTACTCGACTAGGCACAGATGCAAAGGACTGTGGCAGTAAGAGGGTGCCCCAGTTTAAAGGGCTGCTCGATGTCTACACAAAAACCTTGTCTACTGATGGGATTGTTGGTCTATACCGAGGATTTAGCGTTTCGATTGTGGGGATTACGCTGTACAGAGGCATGTATTTTGGGATTTACGACACCTTGAAGCCTCTGGTTTTGGTTGGAAATTTTGAGGGTAACTTTGTTGCTAGTTTCTTATTGGGGTGGAGCATCACAACCTGTTCTGGGTTATTAGCATATCCTTTCGACACACTGCGACGAAGAATGATGCTTACCTCCGGACAAACCTTGAAGTACCGTAGCGCTCTTCATGCATTCTCAGAGATCATTCGCCTCGAGGGTTTTCCTTCTCTTTTTCGAGGAGTCAGTGCCAATATGCTTGCTGGTATTGCAGGGGCTGGTGTTCTTGCTGGTTATGATCAACTGCACGAAGTTGCGTGTAGACACGGTTCTCACCTCCAAACTTCACAACGAGATGGTGTGATGGTGTTTCCATTAGGTCACCAAGGTGGTGCCCGAGCATCCACGGCGGCAGGAGGGCTGCCGATCTATCGTAGTTGGCAGCCACGTCTTTGTCTCTCGTGGTCATGGCAAGAGATGGGAATGGCTGAGGTAGGAGAAGCGGGGAAACGCCATGGCTATACTCCTGCTGCTGCTCCGATGAACCTCTACCCTGGCTTTGAGCTTTGCATGTTCAAGACTCCAATTTCCCTATAA 1233 47.36 MVLFDRGSFKRTMQQGKERVMATISEKFSADFAMGGVAAIVAKTAAAPIERVKLLLQNQGELLKRGHLKNPYLGIHDCFRRVLKEEGILSLWRGNQANVIRYFPTQAFNFAFKGYFKTKFGRSKEKDGYMKWFAGNVASGSAAGASTSLFLYHLDYARTRLGTDAKDCGSKRVPQFKGLLDVYTKTLSTDGIVGLYRGFSVSIVGITLYRGMYFGIYDTLKPLVLVGNFEGNFVASFLLGWSITTCSGLLAYPFDTLRRRMMLTSGQTLKYRSALHAFSEIIRLEGFPSLFRGVSANMLAGIAGAGVLAGYDQLHEVACRHGSHLQTSQRDGVMVFPLGHQGGARASTAAGGLPIYRSWQPRLCLSWSWQEMGMAEVGEAGKRHGYTPAAAPMNLYPGFELCMFKTPISL 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 72583 80083 + CmoCh18G000180.1 Cmo18g00018 401791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00018 410 Pfam Mitochondrial carrier protein 232 317 IPR018108 -
Cmo18g00018 410 Pfam Mitochondrial carrier protein 27 122 IPR018108 -
Cmo18g00018 410 Pfam Mitochondrial carrier protein 132 224 IPR018108 -
Cmo18g00018 410 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Cmo18g00018 410 PRINTS Mitochondrial carrier protein signature 146 164 IPR002067 GO:0055085
Cmo18g00018 410 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Cmo18g00018 410 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Cmo18g00018 410 PRINTS Mitochondrial carrier protein signature 44 58 IPR002067 GO:0055085
Cmo18g00018 410 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Cmo18g00018 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 317 IPR018108 -
Cmo18g00018 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 119 IPR018108 -
Cmo18g00018 410 PRINTS Adenine nucleotide translocator signature 28 40 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo18g00018 410 PRINTS Adenine nucleotide translocator signature 105 117 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo18g00018 410 PRINTS Adenine nucleotide translocator signature 131 144 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo18g00018 410 PRINTS Adenine nucleotide translocator signature 72 93 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo18g00018 410 PRINTS Adenine nucleotide translocator signature 236 252 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo18g00018 410 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 21 328 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo18g00018 410 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 21 328 - -
Cmo18g00018 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 223 IPR018108 -
Cmo18g00018 410 SUPERFAMILY Mitochondrial carrier 27 314 IPR023395 -
Cmo18g00018 410 Gene3D Mitochondrial carrier domain 22 321 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g00018 Cmo-Chr18:72583 Cmo19g01035 Cmo-Chr19:9038739 1.68E-123 dispersed
Cmo18g00018 Cmo-Chr18:72583 Cmo13g01101 Cmo-Chr13:9042063 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00018 K05863 - csv:101207715 498.819