Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00018 | ATGGTGCTATTCGACAGAGGAAGCTTCAAAAGAACAATGCAGCAAGGGAAGGAGAGAGTAATGGCGACAATATCCGAGAAATTTTCGGCTGATTTTGCGATGGGTGGGGTTGCCGCGATTGTGGCCAAAACTGCAGCCGCACCCATTGAAAGGGTCAAGCTTTTGTTGCAGAATCAGGGGGAGTTGTTAAAGAGAGGTCATCTCAAGAACCCATATCTGGGCATTCATGATTGTTTCAGAAGAGTTTTGAAAGAAGAAGGGATATTGTCGCTTTGGAGGGGAAATCAGGCCAACGTTATTCGATATTTCCCAACTCAGGCTTTCAACTTTGCGTTCAAAGGTTACTTCAAAACCAAATTTGGGCGCTCAAAAGAGAAGGATGGATACATGAAGTGGTTTGCTGGAAATGTTGCTTCAGGAAGTGCTGCAGGAGCATCTACATCTTTGTTTCTGTATCATTTGGATTATGCACGTACTCGACTAGGCACAGATGCAAAGGACTGTGGCAGTAAGAGGGTGCCCCAGTTTAAAGGGCTGCTCGATGTCTACACAAAAACCTTGTCTACTGATGGGATTGTTGGTCTATACCGAGGATTTAGCGTTTCGATTGTGGGGATTACGCTGTACAGAGGCATGTATTTTGGGATTTACGACACCTTGAAGCCTCTGGTTTTGGTTGGAAATTTTGAGGGTAACTTTGTTGCTAGTTTCTTATTGGGGTGGAGCATCACAACCTGTTCTGGGTTATTAGCATATCCTTTCGACACACTGCGACGAAGAATGATGCTTACCTCCGGACAAACCTTGAAGTACCGTAGCGCTCTTCATGCATTCTCAGAGATCATTCGCCTCGAGGGTTTTCCTTCTCTTTTTCGAGGAGTCAGTGCCAATATGCTTGCTGGTATTGCAGGGGCTGGTGTTCTTGCTGGTTATGATCAACTGCACGAAGTTGCGTGTAGACACGGTTCTCACCTCCAAACTTCACAACGAGATGGTGTGATGGTGTTTCCATTAGGTCACCAAGGTGGTGCCCGAGCATCCACGGCGGCAGGAGGGCTGCCGATCTATCGTAGTTGGCAGCCACGTCTTTGTCTCTCGTGGTCATGGCAAGAGATGGGAATGGCTGAGGTAGGAGAAGCGGGGAAACGCCATGGCTATACTCCTGCTGCTGCTCCGATGAACCTCTACCCTGGCTTTGAGCTTTGCATGTTCAAGACTCCAATTTCCCTATAA | 1233 | 47.36 | MVLFDRGSFKRTMQQGKERVMATISEKFSADFAMGGVAAIVAKTAAAPIERVKLLLQNQGELLKRGHLKNPYLGIHDCFRRVLKEEGILSLWRGNQANVIRYFPTQAFNFAFKGYFKTKFGRSKEKDGYMKWFAGNVASGSAAGASTSLFLYHLDYARTRLGTDAKDCGSKRVPQFKGLLDVYTKTLSTDGIVGLYRGFSVSIVGITLYRGMYFGIYDTLKPLVLVGNFEGNFVASFLLGWSITTCSGLLAYPFDTLRRRMMLTSGQTLKYRSALHAFSEIIRLEGFPSLFRGVSANMLAGIAGAGVLAGYDQLHEVACRHGSHLQTSQRDGVMVFPLGHQGGARASTAAGGLPIYRSWQPRLCLSWSWQEMGMAEVGEAGKRHGYTPAAAPMNLYPGFELCMFKTPISL | 410 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 72583 | 80083 | + | CmoCh18G000180.1 | Cmo18g00018 | 401791 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00018 | 410 | Pfam | Mitochondrial carrier protein | 232 | 317 | IPR018108 | - | |
Cmo18g00018 | 410 | Pfam | Mitochondrial carrier protein | 27 | 122 | IPR018108 | - | |
Cmo18g00018 | 410 | Pfam | Mitochondrial carrier protein | 132 | 224 | IPR018108 | - | |
Cmo18g00018 | 410 | PRINTS | Mitochondrial carrier protein signature | 31 | 44 | IPR002067 | GO:0055085 | |
Cmo18g00018 | 410 | PRINTS | Mitochondrial carrier protein signature | 146 | 164 | IPR002067 | GO:0055085 | |
Cmo18g00018 | 410 | PRINTS | Mitochondrial carrier protein signature | 196 | 214 | IPR002067 | GO:0055085 | |
Cmo18g00018 | 410 | PRINTS | Mitochondrial carrier protein signature | 240 | 262 | IPR002067 | GO:0055085 | |
Cmo18g00018 | 410 | PRINTS | Mitochondrial carrier protein signature | 44 | 58 | IPR002067 | GO:0055085 | |
Cmo18g00018 | 410 | PRINTS | Mitochondrial carrier protein signature | 94 | 114 | IPR002067 | GO:0055085 | |
Cmo18g00018 | 410 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 231 | 317 | IPR018108 | - | |
Cmo18g00018 | 410 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 119 | IPR018108 | - | |
Cmo18g00018 | 410 | PRINTS | Adenine nucleotide translocator signature | 28 | 40 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo18g00018 | 410 | PRINTS | Adenine nucleotide translocator signature | 105 | 117 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo18g00018 | 410 | PRINTS | Adenine nucleotide translocator signature | 131 | 144 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo18g00018 | 410 | PRINTS | Adenine nucleotide translocator signature | 72 | 93 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo18g00018 | 410 | PRINTS | Adenine nucleotide translocator signature | 236 | 252 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo18g00018 | 410 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 21 | 328 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo18g00018 | 410 | PANTHER | ADP,ATP CARRIER PROTEIN ER-ANT1 | 21 | 328 | - | - | |
Cmo18g00018 | 410 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 131 | 223 | IPR018108 | - | |
Cmo18g00018 | 410 | SUPERFAMILY | Mitochondrial carrier | 27 | 314 | IPR023395 | - | |
Cmo18g00018 | 410 | Gene3D | Mitochondrial carrier domain | 22 | 321 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo18g00018 | Cmo-Chr18:72583 | Cmo19g01035 | Cmo-Chr19:9038739 | 1.68E-123 | dispersed | |
Cmo18g00018 | Cmo-Chr18:72583 | Cmo13g01101 | Cmo-Chr13:9042063 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00018 | K05863 | - | csv:101207715 | 498.819 |