Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00057 | ATGGAGAGCTTATTAGGTCTTCTTCGTATTCGGATCATTCGCGGCGTCAACCTTGCCGTTCGCGACGTTCGCAGCAGTGATCCTTACATCGTTGTTAAATTGAATAAACAGAAATTGAAGACCCGTGTGATCAAGAAGGATGTCAATCCTGAATGGAACGAGGACCTCACTCTTTCTGTTACCGACCCCGATGTTTCAGTCAAGCTCACGGTGTACGACCACGACACGTTTACGATGGACGACAAGATGGGAGATGCGGAGTTCGAGATAGGGCCATACATCGAAGCACTGAAGATGGATTTGGCAGAGCTACCAAGTGGAACCGTGCTGTCAAGAGTGCAGCCATGCAGGCAAAACTGCTTAGCCGAGGAGAGCGCCATAGTGTGGGAGGAAGGCAAGGTTATTCAAAACATTTGCCTGCGCTTGCGCAATGTTGAATGTGGCGAAGTTGAAATCCAGTTGCAGTGGATTGAGCTTCCTGGTGCCAAAGGTTTGTAA | 498 | 49.0 | MESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKLNKQKLKTRVIKKDVNPEWNEDLTLSVTDPDVSVKLTVYDHDTFTMDDKMGDAEFEIGPYIEALKMDLAELPSGTVLSRVQPCRQNCLAEESAIVWEEGKVIQNICLRLRNVECGEVEIQLQWIELPGAKGL | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 373965 | 374917 | + | CmoCh18G000570.1 | Cmo18g00057 | 401830 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00057 | 165 | CDD | C2_ArfGAP | 5 | 148 | - | - | |
Cmo18g00057 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE | 1 | 164 | - | - | |
Cmo18g00057 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 143 | IPR035892 | - | |
Cmo18g00057 | 165 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
Cmo18g00057 | 165 | Gene3D | C2 domain | 4 | 163 | IPR035892 | - | |
Cmo18g00057 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
Cmo18g00057 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - | |
Cmo18g00057 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo13g01025 | Cmo18g00057 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00380 | Cmo-Chr1:1849933 | Cmo18g00057 | Cmo-Chr18:373965 | 1.12E-49 | dispersed | |
Cmo04g00055 | Cmo-Chr4:306494 | Cmo18g00057 | Cmo-Chr18:373965 | 4.21E-68 | dispersed | |
Cmo04g02221 | Cmo-Chr4:16597224 | Cmo18g00057 | Cmo-Chr18:373965 | 1.37E-72 | dispersed | |
Cmo11g00319 | Cmo-Chr11:1548827 | Cmo18g00057 | Cmo-Chr18:373965 | 2.96E-88 | dispersed | |
Cmo14g00852 | Cmo-Chr14:4511055 | Cmo18g00057 | Cmo-Chr18:373965 | 6.16E-82 | dispersed | |
Cmo18g00057 | Cmo-Chr18:373965 | Cmo07g00063 | Cmo-Chr7:358765 | 2.53E-40 | dispersed | |
Cmo10g00353 | Cmo-Chr10:1600544 | Cmo18g00057 | Cmo-Chr18:373965 | 1.13E-92 | wgd | |
Cmo13g01025 | Cmo-Chr13:8651244 | Cmo18g00057 | Cmo-Chr18:373965 | 9.64E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00057 | - | - | cmo:103502345 | 295.049 |