Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00057 ATGGAGAGCTTATTAGGTCTTCTTCGTATTCGGATCATTCGCGGCGTCAACCTTGCCGTTCGCGACGTTCGCAGCAGTGATCCTTACATCGTTGTTAAATTGAATAAACAGAAATTGAAGACCCGTGTGATCAAGAAGGATGTCAATCCTGAATGGAACGAGGACCTCACTCTTTCTGTTACCGACCCCGATGTTTCAGTCAAGCTCACGGTGTACGACCACGACACGTTTACGATGGACGACAAGATGGGAGATGCGGAGTTCGAGATAGGGCCATACATCGAAGCACTGAAGATGGATTTGGCAGAGCTACCAAGTGGAACCGTGCTGTCAAGAGTGCAGCCATGCAGGCAAAACTGCTTAGCCGAGGAGAGCGCCATAGTGTGGGAGGAAGGCAAGGTTATTCAAAACATTTGCCTGCGCTTGCGCAATGTTGAATGTGGCGAAGTTGAAATCCAGTTGCAGTGGATTGAGCTTCCTGGTGCCAAAGGTTTGTAA 498 49.0 MESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKLNKQKLKTRVIKKDVNPEWNEDLTLSVTDPDVSVKLTVYDHDTFTMDDKMGDAEFEIGPYIEALKMDLAELPSGTVLSRVQPCRQNCLAEESAIVWEEGKVIQNICLRLRNVECGEVEIQLQWIELPGAKGL 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 373965 374917 + CmoCh18G000570.1 Cmo18g00057 401830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00057 165 CDD C2_ArfGAP 5 148 - -
Cmo18g00057 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
Cmo18g00057 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 143 IPR035892 -
Cmo18g00057 165 Pfam C2 domain 6 92 IPR000008 -
Cmo18g00057 165 Gene3D C2 domain 4 163 IPR035892 -
Cmo18g00057 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Cmo18g00057 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Cmo18g00057 165 SMART C2_3c 7 102 IPR000008 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g01025 Cmo18g00057 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00380 Cmo-Chr1:1849933 Cmo18g00057 Cmo-Chr18:373965 1.12E-49 dispersed
Cmo04g00055 Cmo-Chr4:306494 Cmo18g00057 Cmo-Chr18:373965 4.21E-68 dispersed
Cmo04g02221 Cmo-Chr4:16597224 Cmo18g00057 Cmo-Chr18:373965 1.37E-72 dispersed
Cmo11g00319 Cmo-Chr11:1548827 Cmo18g00057 Cmo-Chr18:373965 2.96E-88 dispersed
Cmo14g00852 Cmo-Chr14:4511055 Cmo18g00057 Cmo-Chr18:373965 6.16E-82 dispersed
Cmo18g00057 Cmo-Chr18:373965 Cmo07g00063 Cmo-Chr7:358765 2.53E-40 dispersed
Cmo10g00353 Cmo-Chr10:1600544 Cmo18g00057 Cmo-Chr18:373965 1.13E-92 wgd
Cmo13g01025 Cmo-Chr13:8651244 Cmo18g00057 Cmo-Chr18:373965 9.64E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00057 - - cmo:103502345 295.049