Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00116 | ATGGCTTTCCCTTTTCTTTTTCTCATTGTCCTCTCCGTCCCCATCTCCGTCCACTCGAAACTCACCCTCGGTTATTACCAAAAAACATGTCCCAACTTCGAGAAGATCATCCGCGAGACCGTCACCAATAAACAAATCAATAGTCCAGTTACCGCCGCAGGAACCCTACGACTCTTCTTCCACGACTGCATGGTCGATGGTTGCGATGCCTCCGTCCTCATTTCCTCCAATACCTTCAACAAAGCCGAACGTGAGGCCGATATCAACCATTCCCTCTCTGGGGATGCCTTTGATGTCATCATTCATGCCAAAACTAACCTCGAACTCGTCTGTCCTGGAATTGTATCTTGTTCTGATATCTTAGCTCAGGCGACTCGGGATTTGGTGGTGATGGTCGGAGGTCCGTTCTACAACGTTCGATTAGGGAGAAAAGATGGGATGATATCAAAATTAGAGAATGTGGAAGGGAACCTCCCATTAGTGAGCGATTCAGTGGACCAACTCATTGATATGTTCGCCGGAAAAGGGTTCACGACCAAAGAATTGGTGGCACTTTCCGGCGGCCATACCATCGGATTCTCCCACTGCAAGGAGTTTGCCGGCCGCCTCTTCAATTTCAGCGCCACCGCACCAACTGACCCAGACATTTACCCAAAATTCGCGGAGAAACTCAAGGTCATGTGCGGTAATTTTCAAAAGGACTCCGACATGTCAGCATTCAACGACGTAATGACACCTGGCAAATTTGACAACATGTACTATCAGAATCTGCCACGTGGACTTGGATTATTGGCTACTGACAATGCGCTAGGTAAGGATCCGAGGACCAAGCCGTTTGTGGATATGTACGCCGTGAACCAAACGGCGTTTTTTAACGACTTCGCTCACGCTATGGAGAAACTCAGTGTTCACGGCGTTAAGACGGGAAGGAAAGGGGAAGTTCGGCGAAGGTGTGATCTGTTCAATTCTATTAAGACATAA | 981 | 48.22 | MAFPFLFLIVLSVPISVHSKLTLGYYQKTCPNFEKIIRETVTNKQINSPVTAAGTLRLFFHDCMVDGCDASVLISSNTFNKAEREADINHSLSGDAFDVIIHAKTNLELVCPGIVSCSDILAQATRDLVVMVGGPFYNVRLGRKDGMISKLENVEGNLPLVSDSVDQLIDMFAGKGFTTKELVALSGGHTIGFSHCKEFAGRLFNFSATAPTDPDIYPKFAEKLKVMCGNFQKDSDMSAFNDVMTPGKFDNMYYQNLPRGLGLLATDNALGKDPRTKPFVDMYAVNQTAFFNDFAHAMEKLSVHGVKTGRKGEVRRRCDLFNSIKT | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 820299 | 821394 | - | CmoCh18G001160.1 | Cmo18g00116 | 401889 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00116 | 326 | SUPERFAMILY | Heme-dependent peroxidases | 21 | 322 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | Gene3D | - | 24 | 322 | - | - | |
Cmo18g00116 | 326 | PANTHER | PEROXIDASE 41 | 5 | 326 | - | - | |
Cmo18g00116 | 326 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 181 | 191 | IPR019793 | - | |
Cmo18g00116 | 326 | ProSitePatterns | Peroxidases active site signature. | 52 | 63 | IPR019794 | GO:0004601 | |
Cmo18g00116 | 326 | Pfam | Peroxidase | 40 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | ProSiteProfiles | Plant heme peroxidase family profile. | 20 | 322 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Haem peroxidase superfamily signature | 52 | 66 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Haem peroxidase superfamily signature | 115 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Haem peroxidase superfamily signature | 133 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Haem peroxidase superfamily signature | 181 | 196 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Haem peroxidase superfamily signature | 242 | 257 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | Gene3D | Peroxidase, domain 2 | 159 | 301 | - | - | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 30 | 49 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 54 | 74 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 95 | 108 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 114 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 133 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 180 | 192 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 240 | 255 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 256 | 273 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | PRINTS | Plant peroxidase signature | 296 | 309 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00116 | 326 | CDD | secretory_peroxidase | 20 | 321 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo18g00116 | 326 | PANTHER | - | 5 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01084 | Cmo-Chr11:6074289 | Cmo18g00116 | Cmo-Chr18:820299 | 6.54E-140 | dispersed | |
Cmo11g01203 | Cmo-Chr11:7087447 | Cmo18g00116 | Cmo-Chr18:820299 | 7.41E-153 | dispersed | |
Cmo14g00639 | Cmo-Chr14:3216333 | Cmo18g00116 | Cmo-Chr18:820299 | 3.45E-141 | dispersed | |
Cmo10g00159 | Cmo-Chr10:719459 | Cmo18g00116 | Cmo-Chr18:820299 | 8.60E-155 | wgd | |
Cmo11g00119 | Cmo-Chr11:619758 | Cmo18g00116 | Cmo-Chr18:820299 | 1.36E-152 | wgd | |
Cmo13g00766 | Cmo-Chr13:7421634 | Cmo18g00116 | Cmo-Chr18:820299 | 4.82E-47 | wgd | |
Cmo13g00930 | Cmo-Chr13:8182766 | Cmo18g00116 | Cmo-Chr18:820299 | 0 | wgd | |
Cmo18g00116 | Cmo-Chr18:820299 | Cmo04g02855 | Cmo-Chr4:20358428 | 4.93E-137 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00116 | K00430 | - | csv:101220163 | 564.303 |