Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00130 ATGGCAGCGAAGATACTCTGTTCTTCAGCACATAACGATACTTTCCTTCATTCTTGCTATTGCAATCGCGCCACCAACCACTGCTTCACCAACTTTCTCCTCGGCGGACGCTCCGAGGTCCTTCTCTTTCGCCTTGTTCTCTTCTCCGATCTCAGATCTCGAGGTCAGGCCATCGAAATGCAGAGCTCTGCGGTTACTTTATCGCCTGCTCTTCCTCTTCTCAAGCCACGGAGGCCTTTGAGTTCGTCTTTCAGCTCTGGATGTAACTCAATTCGGGTATCTTCTTCGTCTTCCTCGAATTCCAGAGATCTCGGAGACCTGAATGATGTTCGTCTCACTTCCTCATGGCCGCAGCGATCTTGGACTCTGTCTTCGTCTCCTTTTTCCTCCGCGAAACTCCGGCCATGGTCTGGCGTGCTCTCGCTTGCTTCGGATTCTGATGCGAGTCATTTCAAGGTTCAGGCTACTGCGGTGCCGGATAGCGCAGGAGAGGATGCTAGTGCTGGCGGTAATCTGAGGAAAACTTTGGAGCTCGGGTTGTTGTTTGGCCTCTGGTACCTTTTCAACATCTACTTTAACATCTACAACAAGCAGGTTCTCAAGGTGTTCCCGTTCCCTGTAACTGTCACTGCAGTTCAATTTGCTGTAGGCACTGTACTTGTTGTTCTTATGTGGGGACTTAATCTTTACAAAAGGCCAAAGATCAGTGGTGCTCAGCTTGCTGCTATTCTGCCGCTGGCATTCGTTCACACATTGGGGAACCTTTTTACAAATATGAGTCTTGGGAAAGTAGCAGTATCGTTCACTCACACAATCAAAGCTATGGAGCCATTTTTTTCAGTTATCCTGTCGGCAATGTTTCTTGGAGAGACTCCCACTCCCTGGGTAGTTGCATCTCTTCTGCCAATTGTTGGTGGTGTTGCATTGGCATCTGCCACTGAGGCGTCCTTCAACTGGGCTGGATTTTGGAGTGCAATGGCGTCCAATGTGACTAATCAATCTCGTAATGTCCTTAGCAAAAAGGTCATGGTGAAGAAAGATGATTCAATTGACAACATCACGCTCTTTTCAATTATAACGGTCATGTCCTTTTTCTTACTATCCCCTGTGGCTATCTTCATGGAAGGTGTCAAGTTCACTCCTGCATACCTTCAATCAGCCGGTTTGAACCTGAATCAAGTCTACACTAGGTCGCTTCTTGCTGCCCTTTGTTTCCATGCCTACCAACAGGTTTCTTACATGATTTTGCAAAGAGTTTCGCCCGTTACCCACTCGGTCGGTAATTGTGTAAAGCGTGTTGTGGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCAGTTTCTCCAATCAACTCTCTTGGCACTGGAGTAGCTCTTGCTGGGGTTTTCCTGTATTCAAGAGTTAAGCGCATCAAAGCTAAGCCAAAGACAGCTTAA 1437 47.39 MAAKILCSSAHNDTFLHSCYCNRATNHCFTNFLLGGRSEVLLFRLVLFSDLRSRGQAIEMQSSAVTLSPALPLLKPRRPLSSSFSSGCNSIRVSSSSSSNSRDLGDLNDVRLTSSWPQRSWTLSSSPFSSAKLRPWSGVLSLASDSDASHFKVQATAVPDSAGEDASAGGNLRKTLELGLLFGLWYLFNIYFNIYNKQVLKVFPFPVTVTAVQFAVGTVLVVLMWGLNLYKRPKISGAQLAAILPLAFVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGETPTPWVVASLLPIVGGVALASATEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKKDDSIDNITLFSIITVMSFFLLSPVAIFMEGVKFTPAYLQSAGLNLNQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSLGTGVALAGVFLYSRVKRIKAKPKTA 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 937564 942936 - CmoCh18G001300.1 Cmo18g00130 401903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00130 478 PANTHER SOLUTE CARRIER FAMILY 35 141 453 - -
Cmo18g00130 478 Pfam Triose-phosphate Transporter family 177 466 IPR004853 -
Cmo18g00130 478 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 176 476 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo18g00130 478 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 311 - -
Cmo18g00130 478 MobiDBLite consensus disorder prediction 80 103 - -
Cmo18g00130 478 SUPERFAMILY Multidrug resistance efflux transporter EmrE 390 469 - -
Cmo18g00130 478 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 141 453 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00914 Cmo18g00130 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g00130 Cmo-Chr18:937564 Cmo01g01194 Cmo-Chr1:9681913 1.46E-66 dispersed
Cmo13g00914 Cmo-Chr13:8091354 Cmo18g00130 Cmo-Chr18:937564 0 wgd
Cmo18g00130 Cmo-Chr18:937564 Cmo04g02826 Cmo-Chr4:20236593 4.61E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00130 K15283 - csv:101203848 685.641