Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00249 ATGTTCAGCCCTGTGACTGCTCGTTCTCCTGCTACGCCTATCACTCCTATTTCATTTGGAGAACCTCGTGCGCGGTCCTTCCTTAAGGAAGCCACTCCTTCGCCTCTTCTTTCTTTATTCACCCGTGCCTCCCTCCACGCCCACTCTGTGCCACGACCGTGCTCTGCTCTCAAAGCCATGGCTGATGGTGAAGCCGTCACCCTTTCTACAAAGATCACCGCTTCATCTCCTTCTGTTTCAGGAAAGAAGCTAGCTCTGATATCCTTGTCAGACAAGAAAAATCTTGCATTTCTAGGAAATGGGCTTCAAGAATTAGGCTACACGATTGTTTCAACTGGAGGGACTGCATCTACATTGGAAACTTCTGGGGTAAGCGTTACTAAGGTGGAGGAGCTGACAAGTTTCCCTGAAATGCTTGATGGTCGTGTAAAAACTTTGCATCCTTCTATACATGGGGGTATACTTGCTAGAAGAGACCAAAAGCATCATATGGACGCCCTTGATAAACATGGAATTGGCACATTTGATGTTGTCGTGGTAAACTTGTACCCGTTTTACGATAAAGTCACCTCATCTCAAAAAATAGACTTTGAAGATGGAATCGAGAACATTGATATTGGTGGCCCGGCCATGATCAGAGCTGCTGCAAAGAACCACAAGGATGTCTTAGTGGTCGTTGATACCGAAGACTATCCTGCACTGCTTGAGTTCTTGAAAGGAAATGAGGATGATCAACAATTTCGTCGAAAGCTTGCTTGGAAGGCATTTCAACATGTAGCTTCTTACGATTCTGCTGTCTCAGAATGGCTGTGGAAGCAGACTGTTGGAGATAAATTTCCTCCCAGCTTAACCGTGCCGCTTTCCCTCAAAAGTTCTCTTCGCTATGGCGAAAATCCTCATCAGAAGGCGGCCTTTTATGTTGATAAGAGTATCTCTGAAGTCAATACAGGTGGTATTGCAACAGCCATCCAACACCATGGAAAGGAGATGTCTTATAACAACTACTTAGATGCGGATGCAGCTTGGAATTGTGTGTCAGAGTTTAGGAATCCTACTTGTGTAGTTGTGAAACACACAAATCCATGTGGTGTAGCTTCACGTGATGATATTCTGGAAGCATATAGACTAGCTGTGAAGGCTGACCCCGTGAGTGCATTTGGTGGCATTGTAGCCTTCAACGTAGAAGTTGATGAGGTTCTTGCAAGGGAAATTCGGGAGTTCAGAAGCCCTACAGATGGTGAAACACGGATGTTTTATGAGATTGTTGTTGCACCCAAGTACACAAAGAAGGGGCTTGAGATCTTGCGTGGGAAATCAAAGACTCTGCGAATTCTTGAGGCAAACAAAAATGAGAAAGGAAAACTCTCACTCAGGCAAGTTGGTGGGGGTTGGTTAGCACAAGATTCTGACGACTTGGTTCCCCAAGATATACAATTTAACGTAGTTTCTGGAAAGGCCCCTCAAGAGAGCGAGCTTCAAGATGCAGAGTTTGCATGGTTGTGCGTCAAGCATGTCAAGAGCAATGCCATTGTGATAGCAAAGAATAACTGTATGTTGGGTATGGGAAGCGGGCAACCAAATCGCCTCGAAAGTTTGAGGATAGCCTTGAGGAAAGCTGGGGACGAGGTCAAAGGAGCTGCTTTGGCTAGTGACGCTTTCTTCCCATTTGCTTGGAATGATGCAGTGGAAGAAGCATGCCAGAGTGGAGTAGGTGTTATTGCAGAGCCCGGGGGCAGCATTCGAGATCCTGATGCTATCGACTGCTGCAACAAGTATGGCGTGTCCCTCGTCTTCACCAACGTGAGGCATTTCAGGCATTGA 1821 46.18 MFSPVTARSPATPITPISFGEPRARSFLKEATPSPLLSLFTRASLHAHSVPRPCSALKAMADGEAVTLSTKITASSPSVSGKKLALISLSDKKNLAFLGNGLQELGYTIVSTGGTASTLETSGVSVTKVEELTSFPEMLDGRVKTLHPSIHGGILARRDQKHHMDALDKHGIGTFDVVVVNLYPFYDKVTSSQKIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDTEDYPALLEFLKGNEDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTVGDKFPPSLTVPLSLKSSLRYGENPHQKAAFYVDKSISEVNTGGIATAIQHHGKEMSYNNYLDADAAWNCVSEFRNPTCVVVKHTNPCGVASRDDILEAYRLAVKADPVSAFGGIVAFNVEVDEVLAREIREFRSPTDGETRMFYEIVVAPKYTKKGLEILRGKSKTLRILEANKNEKGKLSLRQVGGGWLAQDSDDLVPQDIQFNVVSGKAPQESELQDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRLESLRIALRKAGDEVKGAALASDAFFPFAWNDAVEEACQSGVGVIAEPGGSIRDPDAIDCCNKYGVSLVFTNVRHFRH 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1646238 1653238 - CmoCh18G002490.1 Cmo18g00249 402022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00249 606 Pfam AICARFT/IMPCHase bienzyme 215 538 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cmo18g00249 606 Hamap Bifunctional purine biosynthesis protein PurH [purH]. 82 606 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cmo18g00249 606 PANTHER BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH 56 606 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cmo18g00249 606 Gene3D - 474 606 IPR024051 -
Cmo18g00249 606 Pfam MGS-like domain 99 209 IPR011607 -
Cmo18g00249 606 TIGRFAM purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 83 606 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cmo18g00249 606 SUPERFAMILY Cytidine deaminase-like 290 606 IPR016193 GO:0003824
Cmo18g00249 606 CDD IMPCH 83 270 - -
Cmo18g00249 606 PANTHER AICARFT/IMPCHASE BIENZYME FAMILY PROTEIN 56 606 - -
Cmo18g00249 606 PIRSF PurH 76 606 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cmo18g00249 606 Gene3D - 287 454 IPR024051 -
Cmo18g00249 606 SMART aicarft_impchas 215 539 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cmo18g00249 606 SUPERFAMILY Methylglyoxal synthase-like 83 273 IPR036914 -
Cmo18g00249 606 ProSiteProfiles MGS-like domain profile. 77 226 IPR011607 -
Cmo18g00249 606 SMART MGS_2a 94 210 IPR011607 -
Cmo18g00249 606 Gene3D - 73 277 IPR036914 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00875 Cmo-Chr13:7951957 Cmo18g00249 Cmo-Chr18:1646238 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00249 K00602 - csv:101206006 1108.2