Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00252 ATGACTTCGAGAGGGGAAAGCGATGGGGAGTCTGAAATGAAGGGAAGCATGTGGGTTTTGGACCAGAAACTCGATCAACCAATGGATGAAGAAGCTGGGAGGCTTAACAATATGTACAAAGAAAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTCTACGTTTTTTACAATACATTTCCTCATGGAATTTCTGATCCGGAAGATGTAGTTGGAGCTCTTTCATTGATTATATACTCTCTCACTCTCATTCCTCTCATAAAATATGTATTTATCGTGTGTAAAGCCAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTATGTCGTCATGCAAATGTAAAAACTATTCCGAACCAACATCGAAAGGATGAGGAGCTAACGACATATAGCCGCTCTAAGTTTCACGAGCAATCGTTTGCTGCTAAAACTAAAGCATGGCTTGAAAGACAATCATCCAGGAAGAATGCGTTGCTCATTCTTGTTCTTGTTGGCACTTCTATGGTTGTTGGAGATGGAATTCTCACGCCTGCAATTTCGGTTTTATCTGCTGCGGGAGGGATCAAAGTAAACAAACCCCATGTGAGCAGTGATGTAGTTGTGCTTGTTGCTGTTGCAATACTAGTAGGATTATTCAGCTTGCAACGCTATGGTACTGATAGAGTGGGTTGGCTCTTTGCCCCTGTTGTGTTACTTTGGTTTCTATTAATTGGAGGTATAGGCATGTTCAACATCTGGAAATATGATAGAACAATTCTAAGAGCCTTTTCACCTGTGTATATTTATCGCTATTTTAAAAGGCGAGGGATGGACGGTTGGACGTCCCTCGGAGGTGTTCTTCTGAGTATAACAGGCACAGAGGCTTTATTTGCGGATCTAGCTCATTTTCGTGTAGCTGCTATACAGATTGCTTTTACAGTATTTGTTTTTCCTTGCCTTCTCTTGGCCTATTCTGGACAAGCTGCTTATCTTATGAGCAATATGGAGCATGTCAATGATGTCTTCTATCGTTCAATCCCAGAGTCCATATATTGGCCAGTGTTTCTTGTGGCAACTGCTGCTGCTATAGTGGCTAGTCAAGCCACTATATCTGCAACATTTTCAATAATCAAGCAGGCTCTTGCTCATGGCTGCTTTCCAAGGGTTAAAGTTGTTCATACCTCGAAGAACTTTCTTGGTCAGATATATGTTCCTGATATTAACTGGATTCTCATGGTTCTTTGCATTGCTGTGACAGCAGGATTTAAGAATCAAAGTCAAATTGGAAATGCTTATGGGACAGCAGTGGTGGTAGTCATGCTTGTGACCACGCTGCTTATGATTCTAATCATGATCTTGGTATGGCGCTGTCATTGGGTCATCGCCCTGATCTTCACCGGTCTGTCGCTAATCGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTACCCCTTGTGATTGCTGCAGCCTTTCTTATCATCATGTATGTGTGGCATTATGGTACAGTTAAACGATACGAATTCGAGCTGCACAGTAAAGTTTCAATGGCATGGGTTCTCGGTCTTGGTCCAAGTTTAGGATTAGTCCGAGTTCCTGGAATTGGACTTGTATATACCGAGCTAGCAAGCGGTGTACCTCACATATTTTCCCATTTCATTACGAATCTCCCTGCCATCCATTCTGTCGTCGTGTTTGTTTGTGTGAAATACCTTCCAGTCTACACCGTGCCAGAGGAAGAACGATTCCTGGTAAAACGGATAGGACCAAAGAACTTCCACATGTTTCGTTGTGTCGCGAGATACGGTTATAAAGACCTCCACAAAAAGGATGATGACTTTGAGAAGAAGCTTTTTGATAGCATCTTCCTGTTTGTTAGGCTTGAATCCATGATGGAAGGTTGTTCAGACTCTGATGAGTACAGTTTATATGGTCAGCAAACTGAGCATTCAAGGGATGGCCTGTTGATTGGCACCAATGGAAATGCAACTACATCCAATGGGGACATGACATTCTCATCGGTTGACTCGATTGTGCCTGTTCGATCTCCGGTGCGTTCGAATAACACAGTAAGGTCATCTGGGCAGGCAAGCAACCATACGGATAGCGACGAGATTGAGTTCTTGATTAGGTGTAGAGATGCAGGGGTGGTGCATATATTGGGGAACACTGTAATTAGAGCAAGAAGGGAATCAAAATTCTACAAGAAGATAGCTGTGGATTATATATATGCATTTCTTAGAAAGATTTGCAGGGAGAACAGTGTGATTTTCAATGTTCCTCATGAGAGTTTATTAAACGTTGGCCAAATTTTCTATGTATAG 2379 42.5 MTSRGESDGESEMKGSMWVLDQKLDQPMDEEAGRLNNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGISDPEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHANVKTIPNQHRKDEELTTYSRSKFHEQSFAAKTKAWLERQSSRKNALLILVLVGTSMVVGDGILTPAISVLSAAGGIKVNKPHVSSDVVVLVAVAILVGLFSLQRYGTDRVGWLFAPVVLLWFLLIGGIGMFNIWKYDRTILRAFSPVYIYRYFKRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVFVFPCLLLAYSGQAAYLMSNMEHVNDVFYRSIPESIYWPVFLVATAAAIVASQATISATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYVPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWVIALIFTGLSLIVECSYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGTNGNATTSNGDMTFSSVDSIVPVRSPVRSNNTVRSSGQASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1675166 1681982 + CmoCh18G002520.1 Cmo18g00252 402025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00252 792 TIGRFAM kup: potassium uptake protein 52 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo18g00252 792 PANTHER POTASSIUM TRANSPORTER 2 791 - -
Cmo18g00252 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo18g00252 792 Pfam K+ potassium transporter 54 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00882 Cmo-Chr13:7973865 Cmo18g00252 Cmo-Chr18:1675166 1.55E-52 dispersed
Cmo13g00883 Cmo-Chr13:7976775 Cmo18g00252 Cmo-Chr18:1675166 0 dispersed
Cmo18g00252 Cmo-Chr18:1675166 Cmo11g01562 Cmo-Chr11:11227075 0 dispersed
Cmo13g00881 Cmo-Chr13:7970476 Cmo18g00252 Cmo-Chr18:1675166 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00252 K03549 - csv:101217915 1434.47