Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00312 ATGATTGCAAAAATTGATGTTATGAAGGAAATTTTCGAGTCGATGGGTCAATTTGTCGATGGATTAAAGTTCTCCGGAGGTTCGCACAGCCTGTTGCCGAGGGAGTTTGTGAAAGAGGTGACGGAAATGGCTCATCGACATGACATTTATGTCAGTACGGGCGACTGGGCGGAGCATTTACTTCGCAAAGGTCCGTCGGGTTTCAAAGAGTATGTGGAGGAATGCAAGCTCATGGGATTTGATACTATTGAGCTTAACGTAGACTCGCTTGAAGTTCCTGAAGAAACTCTTCTGAGATATGTGCGCTTGATTAAGAACGGTGGCCTTAGGGCTAAGCCTCAATTTGCAGTGAAGTTCAATAAGTCGGACATTCCCGCTGGCGATCGAGCATTTGGAGCTTATATTGTTCCAAGACCTCGATCTTCTGAGGATGTTGATCTTTTGATCAGAAGGGCTGAGAGATGCCTAGAAGCTGGGGCAGACATGATAATGATCGACGCAGACGATGTCAGTAAACACACTGATTCTCTTCGAACAGACATTATTGCCAAGATCATTGGGCGTCTTGGCCTAGAGAAAACAATGTTTGAAGCATCGAATCCCCAAATGTTGGAGTGGTTTATCAATCAATACAGCTCAAAGGTGAATCTCTTTGTGGATCACTCCCAAGTTATGGATCTTGAGTGCCTCCGAGGCCGCAACCTGGGAGGCGGCGAGTCACAGAAGCTTGACCAATCTAACGACGAGAGAAGAAAGAAGGCGATCGTCTCTGGTCCGCGAGCGAGGGAGAGAGCAGTGAGAAGGGTTCTATTTGGTACGATGTCGAAGAAGAAAGGGAGTGGTAATACTATGACGCTTAAGGATTTCCATGGAGGTTCTATCCCTAATGATCTGCCTCTCCCGTCTGCTCCTGGAGTACCTTCAGATCGGACTAGTTTCGATCGCCCTACATCATGGGGGAACCCAATGAACAGGTCGGACCATCGGTCTAGGCCGCATTCATCTCCGGCAATCAGTCATTTTGATGACAAAACTCCATTTCTCGCTCCTGCTGCACATATTGGCCGAAATTTCGATGAGGATGAAAGGAAGCCTCTGGGCGGTGTAACACCTCCACGTCGAACTATCAGTGATGAGAGCATTAGGGTTCTGCCTAGTCGTTCAGAGTTGAAGCATGACTATGAATCAAGTGGGAGGCAGAGGATGGCTCCAATGTCGCAGTTTCCAACTTCTGGTGCAGTAAATTCGTACGCAGGGAGAGTTGGTGACGCGTTCAACTCAGGTGTTGCTTCTCAGAATTCAGGTGGAGGCAGCGGGATGGCCTTTTCTGGGGCTCATCCAAATGCTTGGCAAGTAAGGAAGGAGGTGGTTTCTGTGGTTAAAGAACATTCTCATTCTGCGTGGGCTGGACCTAGTGCTGTCTCAAAGCTTGCTCATGCTAGTGCTCTCGAAAAGGTGTCTTCAGGGAGATGGCAGTCACAAACGTCCGTTGGTTATCAAACTGATGTGGTCGTTGTCGCATCTTCTGAACCAGATATTAAAGTTCAGTCAAAGGGTTATGGTAGTTCCTCTGACAAGGTTGATGTATTGTATGGTAGGGAACTTCGTGATGCTTCATTAGCTAGGCATGCAGGAAGACAACTTGGCATAGATGATGGAACCGAGGGAAATAGACAAGCTTTTTCCGAGCGTGATAGAGTTGTAGTTCCTAAATATCATGCTGTTAAAGATAGATCTTCTAAAATGGATGTTTCTGTAGTTCAGCATTCTGAGCCTAATCAAATGGCTGGCGTGGGTCCAGTAGTCTCAGAACGCCCAAAGTTGAAATTACTTCCAAGAACAAAGCCTTTGACAGGTTCAGAACCCATTGCTCCTGATAACAAGCAGGTATGGACAGTTCATTTTATGATGATTCCTAATGCTGTTTCTGCTGAAAATGTGAATGAAGTGCATGGAAATTCAAATTATGTGAAACCTAGTTCAGCTGGTTCTGAGAGTGGGAAGGAAGGAATTGAGCGTCCAAAATTGAACCTGAAGCCCCGGTCACAACCCATTGAACAACCGGAAGGAATTAGGGGGAGAGACAGGTCAGTTGTTTCATCAGCGTCTCTCCCCATTTCCCTATTGGGATTTCTTTGTTTGGTGGTGCTCGCCCACGGGAGCAGGTCAGTTAAATCTTTAGTTTTTGGGAGTATTTATAGTATCTTGCCTGTTCTTTATTGGCGTTTGATCGACGTCTCAGATCCCCCTCTTCTTTGTGGCCTCAACTTCCTGTTAATACCACTATCATTTTCTCAGGTTCTGAAGGAACGAGGGGTTGATAATACCACTAATAACAACCATGATCTTGTTCAAAATTCCGGAAGGATTGAAGAAAACATTTCAAGAACTGAGAGGGTTCAAGGGCCCCCAGTTCCTGTGCATCGAACTGGAAAAACAGGGCAGGGTATGGAAGGTGAGAGAAGGGATAACAGGGCAGATCCAGAGATGCAAAGGAGGAATTTCTCTGATAATCGGAGGAGGGATAGAGACACTGAAAGACGACAGCAGCAGCAGCAGCAGCAGCAGCTCGAGCGGCCACCTTCTCCAGAGACATGGCGCAAGCCTGTTGAGCAGCAGCCAAAGCCTGCCTCGAACTCTACCGACGTGTGTCCTGGGAAAGTAGCTTCAGCACTTGAGCTGGCTCAAGCCTTCTCTAGGTCGGTTTCGGATTCAAACGTGGCCGATCGGGTTCCCAGTCAAAGCAACCTCCCAGGACGGCCTCAGATGCCTTTTTCACGGCTTATGGGGTCATCCTCTAGACCCCAAATCAATGGTTATTAA 2823 47.22 MIAKIDVMKEIFESMGQFVDGLKFSGGSHSLLPREFVKEVTEMAHRHDIYVSTGDWAEHLLRKGPSGFKEYVEECKLMGFDTIELNVDSLEVPEETLLRYVRLIKNGGLRAKPQFAVKFNKSDIPAGDRAFGAYIVPRPRSSEDVDLLIRRAERCLEAGADMIMIDADDVSKHTDSLRTDIIAKIIGRLGLEKTMFEASNPQMLEWFINQYSSKVNLFVDHSQVMDLECLRGRNLGGGESQKLDQSNDERRKKAIVSGPRARERAVRRVLFGTMSKKKGSGNTMTLKDFHGGSIPNDLPLPSAPGVPSDRTSFDRPTSWGNPMNRSDHRSRPHSSPAISHFDDKTPFLAPAAHIGRNFDEDERKPLGGVTPPRRTISDESIRVLPSRSELKHDYESSGRQRMAPMSQFPTSGAVNSYAGRVGDAFNSGVASQNSGGGSGMAFSGAHPNAWQVRKEVVSVVKEHSHSAWAGPSAVSKLAHASALEKVSSGRWQSQTSVGYQTDVVVVASSEPDIKVQSKGYGSSSDKVDVLYGRELRDASLARHAGRQLGIDDGTEGNRQAFSERDRVVVPKYHAVKDRSSKMDVSVVQHSEPNQMAGVGPVVSERPKLKLLPRTKPLTGSEPIAPDNKQVWTVHFMMIPNAVSAENVNEVHGNSNYVKPSSAGSESGKEGIERPKLNLKPRSQPIEQPEGIRGRDRSVVSSASLPISLLGFLCLVVLAHGSRSVKSLVFGSIYSILPVLYWRLIDVSDPPLLCGLNFLLIPLSFSQVLKERGVDNTTNNNHDLVQNSGRIEENISRTERVQGPPVPVHRTGKTGQGMEGERRDNRADPEMQRRNFSDNRRRDRDTERRQQQQQQQQLERPPSPETWRKPVEQQPKPASNSTDVCPGKVASALELAQAFSRSVSDSNVADRVPSQSNLPGRPQMPFSRLMGSSSRPQINGY 940
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1991531 1999648 + CmoCh18G003120.1 Cmo18g00312 402085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00312 940 Gene3D Aldolase class I 3 238 IPR013785 -
Cmo18g00312 940 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 6 231 IPR036112 -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 311 325 - -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 235 259 - -
Cmo18g00312 940 PANTHER OS07G0546100 PROTEIN 766 940 - -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 652 673 - -
Cmo18g00312 940 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 274 699 IPR010433 GO:0003743
Cmo18g00312 940 MobiDBLite consensus disorder prediction 814 849 - -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 773 791 - -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 899 940 - -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 243 259 - -
Cmo18g00312 940 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 7 234 IPR003830 -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 773 885 - -
Cmo18g00312 940 MobiDBLite consensus disorder prediction 291 343 - -
Cmo18g00312 940 PANTHER OS07G0546100 PROTEIN 274 699 - -
Cmo18g00312 940 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 766 940 IPR010433 GO:0003743
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00724 Cmo-Chr13:7247993 Cmo18g00312 Cmo-Chr18:1991531 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00312 - - cmos:111434321 763.837