Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00312 | ATGATTGCAAAAATTGATGTTATGAAGGAAATTTTCGAGTCGATGGGTCAATTTGTCGATGGATTAAAGTTCTCCGGAGGTTCGCACAGCCTGTTGCCGAGGGAGTTTGTGAAAGAGGTGACGGAAATGGCTCATCGACATGACATTTATGTCAGTACGGGCGACTGGGCGGAGCATTTACTTCGCAAAGGTCCGTCGGGTTTCAAAGAGTATGTGGAGGAATGCAAGCTCATGGGATTTGATACTATTGAGCTTAACGTAGACTCGCTTGAAGTTCCTGAAGAAACTCTTCTGAGATATGTGCGCTTGATTAAGAACGGTGGCCTTAGGGCTAAGCCTCAATTTGCAGTGAAGTTCAATAAGTCGGACATTCCCGCTGGCGATCGAGCATTTGGAGCTTATATTGTTCCAAGACCTCGATCTTCTGAGGATGTTGATCTTTTGATCAGAAGGGCTGAGAGATGCCTAGAAGCTGGGGCAGACATGATAATGATCGACGCAGACGATGTCAGTAAACACACTGATTCTCTTCGAACAGACATTATTGCCAAGATCATTGGGCGTCTTGGCCTAGAGAAAACAATGTTTGAAGCATCGAATCCCCAAATGTTGGAGTGGTTTATCAATCAATACAGCTCAAAGGTGAATCTCTTTGTGGATCACTCCCAAGTTATGGATCTTGAGTGCCTCCGAGGCCGCAACCTGGGAGGCGGCGAGTCACAGAAGCTTGACCAATCTAACGACGAGAGAAGAAAGAAGGCGATCGTCTCTGGTCCGCGAGCGAGGGAGAGAGCAGTGAGAAGGGTTCTATTTGGTACGATGTCGAAGAAGAAAGGGAGTGGTAATACTATGACGCTTAAGGATTTCCATGGAGGTTCTATCCCTAATGATCTGCCTCTCCCGTCTGCTCCTGGAGTACCTTCAGATCGGACTAGTTTCGATCGCCCTACATCATGGGGGAACCCAATGAACAGGTCGGACCATCGGTCTAGGCCGCATTCATCTCCGGCAATCAGTCATTTTGATGACAAAACTCCATTTCTCGCTCCTGCTGCACATATTGGCCGAAATTTCGATGAGGATGAAAGGAAGCCTCTGGGCGGTGTAACACCTCCACGTCGAACTATCAGTGATGAGAGCATTAGGGTTCTGCCTAGTCGTTCAGAGTTGAAGCATGACTATGAATCAAGTGGGAGGCAGAGGATGGCTCCAATGTCGCAGTTTCCAACTTCTGGTGCAGTAAATTCGTACGCAGGGAGAGTTGGTGACGCGTTCAACTCAGGTGTTGCTTCTCAGAATTCAGGTGGAGGCAGCGGGATGGCCTTTTCTGGGGCTCATCCAAATGCTTGGCAAGTAAGGAAGGAGGTGGTTTCTGTGGTTAAAGAACATTCTCATTCTGCGTGGGCTGGACCTAGTGCTGTCTCAAAGCTTGCTCATGCTAGTGCTCTCGAAAAGGTGTCTTCAGGGAGATGGCAGTCACAAACGTCCGTTGGTTATCAAACTGATGTGGTCGTTGTCGCATCTTCTGAACCAGATATTAAAGTTCAGTCAAAGGGTTATGGTAGTTCCTCTGACAAGGTTGATGTATTGTATGGTAGGGAACTTCGTGATGCTTCATTAGCTAGGCATGCAGGAAGACAACTTGGCATAGATGATGGAACCGAGGGAAATAGACAAGCTTTTTCCGAGCGTGATAGAGTTGTAGTTCCTAAATATCATGCTGTTAAAGATAGATCTTCTAAAATGGATGTTTCTGTAGTTCAGCATTCTGAGCCTAATCAAATGGCTGGCGTGGGTCCAGTAGTCTCAGAACGCCCAAAGTTGAAATTACTTCCAAGAACAAAGCCTTTGACAGGTTCAGAACCCATTGCTCCTGATAACAAGCAGGTATGGACAGTTCATTTTATGATGATTCCTAATGCTGTTTCTGCTGAAAATGTGAATGAAGTGCATGGAAATTCAAATTATGTGAAACCTAGTTCAGCTGGTTCTGAGAGTGGGAAGGAAGGAATTGAGCGTCCAAAATTGAACCTGAAGCCCCGGTCACAACCCATTGAACAACCGGAAGGAATTAGGGGGAGAGACAGGTCAGTTGTTTCATCAGCGTCTCTCCCCATTTCCCTATTGGGATTTCTTTGTTTGGTGGTGCTCGCCCACGGGAGCAGGTCAGTTAAATCTTTAGTTTTTGGGAGTATTTATAGTATCTTGCCTGTTCTTTATTGGCGTTTGATCGACGTCTCAGATCCCCCTCTTCTTTGTGGCCTCAACTTCCTGTTAATACCACTATCATTTTCTCAGGTTCTGAAGGAACGAGGGGTTGATAATACCACTAATAACAACCATGATCTTGTTCAAAATTCCGGAAGGATTGAAGAAAACATTTCAAGAACTGAGAGGGTTCAAGGGCCCCCAGTTCCTGTGCATCGAACTGGAAAAACAGGGCAGGGTATGGAAGGTGAGAGAAGGGATAACAGGGCAGATCCAGAGATGCAAAGGAGGAATTTCTCTGATAATCGGAGGAGGGATAGAGACACTGAAAGACGACAGCAGCAGCAGCAGCAGCAGCAGCTCGAGCGGCCACCTTCTCCAGAGACATGGCGCAAGCCTGTTGAGCAGCAGCCAAAGCCTGCCTCGAACTCTACCGACGTGTGTCCTGGGAAAGTAGCTTCAGCACTTGAGCTGGCTCAAGCCTTCTCTAGGTCGGTTTCGGATTCAAACGTGGCCGATCGGGTTCCCAGTCAAAGCAACCTCCCAGGACGGCCTCAGATGCCTTTTTCACGGCTTATGGGGTCATCCTCTAGACCCCAAATCAATGGTTATTAA | 2823 | 47.22 | MIAKIDVMKEIFESMGQFVDGLKFSGGSHSLLPREFVKEVTEMAHRHDIYVSTGDWAEHLLRKGPSGFKEYVEECKLMGFDTIELNVDSLEVPEETLLRYVRLIKNGGLRAKPQFAVKFNKSDIPAGDRAFGAYIVPRPRSSEDVDLLIRRAERCLEAGADMIMIDADDVSKHTDSLRTDIIAKIIGRLGLEKTMFEASNPQMLEWFINQYSSKVNLFVDHSQVMDLECLRGRNLGGGESQKLDQSNDERRKKAIVSGPRARERAVRRVLFGTMSKKKGSGNTMTLKDFHGGSIPNDLPLPSAPGVPSDRTSFDRPTSWGNPMNRSDHRSRPHSSPAISHFDDKTPFLAPAAHIGRNFDEDERKPLGGVTPPRRTISDESIRVLPSRSELKHDYESSGRQRMAPMSQFPTSGAVNSYAGRVGDAFNSGVASQNSGGGSGMAFSGAHPNAWQVRKEVVSVVKEHSHSAWAGPSAVSKLAHASALEKVSSGRWQSQTSVGYQTDVVVVASSEPDIKVQSKGYGSSSDKVDVLYGRELRDASLARHAGRQLGIDDGTEGNRQAFSERDRVVVPKYHAVKDRSSKMDVSVVQHSEPNQMAGVGPVVSERPKLKLLPRTKPLTGSEPIAPDNKQVWTVHFMMIPNAVSAENVNEVHGNSNYVKPSSAGSESGKEGIERPKLNLKPRSQPIEQPEGIRGRDRSVVSSASLPISLLGFLCLVVLAHGSRSVKSLVFGSIYSILPVLYWRLIDVSDPPLLCGLNFLLIPLSFSQVLKERGVDNTTNNNHDLVQNSGRIEENISRTERVQGPPVPVHRTGKTGQGMEGERRDNRADPEMQRRNFSDNRRRDRDTERRQQQQQQQQLERPPSPETWRKPVEQQPKPASNSTDVCPGKVASALELAQAFSRSVSDSNVADRVPSQSNLPGRPQMPFSRLMGSSSRPQINGY | 940 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 1991531 | 1999648 | + | CmoCh18G003120.1 | Cmo18g00312 | 402085 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00312 | 940 | Gene3D | Aldolase class I | 3 | 238 | IPR013785 | - | |
Cmo18g00312 | 940 | SUPERFAMILY | (2r)-phospho-3-sulfolactate synthase ComA | 6 | 231 | IPR036112 | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 311 | 325 | - | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 235 | 259 | - | - | |
Cmo18g00312 | 940 | PANTHER | OS07G0546100 PROTEIN | 766 | 940 | - | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 652 | 673 | - | - | |
Cmo18g00312 | 940 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 274 | 699 | IPR010433 | GO:0003743 | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 814 | 849 | - | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 773 | 791 | - | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 899 | 940 | - | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 243 | 259 | - | - | |
Cmo18g00312 | 940 | Pfam | (2R)-phospho-3-sulfolactate synthase (ComA) | 7 | 234 | IPR003830 | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 773 | 885 | - | - | |
Cmo18g00312 | 940 | MobiDBLite | consensus disorder prediction | 291 | 343 | - | - | |
Cmo18g00312 | 940 | PANTHER | OS07G0546100 PROTEIN | 274 | 699 | - | - | |
Cmo18g00312 | 940 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 766 | 940 | IPR010433 | GO:0003743 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo13g00724 | Cmo-Chr13:7247993 | Cmo18g00312 | Cmo-Chr18:1991531 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00312 | - | - | cmos:111434321 | 763.837 |