Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00377 | ATGCCTGTCTCTTCTTTATCTTCTTCTTCTTCCCCTCTCTCTCCCCTCTGTTTTCTCACTCTGCTTCTCATTTTCATCACACCATCAGAGTGTGCTGCAACACCAGCACCTAAAAAGGCCCCCGCCCGCCGCCACCGCCTCCTCTCTGTCGACTACTACACCAAAACATGCCCTCACCTCGAGCAACTCGTCTCCTCAATCACCACTCAACAGTTCAGAGACGCACCAGTCTCAGCTCCAGCAACACTCCGCCTGTTCTTTCATGATTGCTTTGTAGAAGGCTGTGATGGGTCGATTCTGATATCGACGAAGCCTGGCAGCAAAGTGGCAGCGGAGAAGGATGCAGCGGACAACAAGGGGCTGAGACCGGAGGGGTTTGAAAGCATCAAGAAGGCCAAGGCGTTGGTTGAGAGCAAGTGCCCTGGCGTTGTGTCTTGTGCTGACATCCTCGCAATTGCAGCCAGAGATTTTGTCCATTTGGCAGGAGGACCGTATTACCAGGTGAAGAAGGGACGATGGGACGGGAAGATATCAATGGCGGCCAGAGTAGGTTCCAATCTGCCGCAAGCAAACTCCACCGTTGATCAGCTTCTCAAACTCTTCAATTCCAAAGGTCTATCAAGCGATGACCTCGTTGTGCTCTCCGGTGCGCACACGATCGGATTTGCGCACTGCGAGCATTTCACAAACCGTCTCTACGACTACAGAGGCACGAAAAAACCGGATCCGGCGATCGACGGGAGACTACTCAAGGAGCTTAAAATGTCGTGCCCTAGGTACGGTGGAAATACGGATATAGTGGCGCCGTTCGATGTAACGACACCGTTTGTGTTCGACCACGCGTACTACGGGAATTTGGAAAGTAAACTAGGGCTGTTGGCTACGGATCAAGCTCTGGTATCGGATGCGAGGATGAAGACGATGGTGCAGAGCTTGGCGAAAGATAAGCAGAAGTTTTTTCAAGCTTTCGCGGCGGCGATGGACAAAATGGGGTCGATCGGAGTGAAGAGGGGGCGACGACATGGAGAGCGACGGACGGATTCCGGCGTAGTCGCCAAGCGAACTACACAGTTCAGCAGCACCAGAACGCAGCCGCTCAGATCCATGAGAGCTGTGGTTCAGAGAGTCGCCTCTGCAAGCGTCGAGGTCGATGGGCGCACCGTTTCGGAGATCGGGCCGGGCCTTCTCGTGCTCGTCGGCGTTCATGACTCCGACACCGATTCCGACGCCGAATACATATGCCGTAAGGTCCTGAATATGAGATTGTTCCCAAATGAGAGTACCTCCAAGGCTTGGGACTTGAATGTAATGCAGAAGAACTACGAGGTTCTACTAGTTAGTCAGTTTACACTCTATGGAATATTGAAGGGCAATAAGCCGGACTTTCATGTGGCAATGCCTCCACAAACTGCTAAGCCCTTCTATGCTTCTGTAGTTGAGAGGTTTGGAAAATCCTACAAACCAGATGCCATTAAAGATGGAGTGTTTGGAGCAAAGATGAAGGTCAATTTGGTGAATGATGGGCCTGTCACAATGCAGATTGACTCCAAACCCTCCAAGTAA | 1563 | 51.82 | MPVSSLSSSSSPLSPLCFLTLLLIFITPSECAATPAPKKAPARRHRLLSVDYYTKTCPHLEQLVSSITTQQFRDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKVAAEKDAADNKGLRPEGFESIKKAKALVESKCPGVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMAARVGSNLPQANSTVDQLLKLFNSKGLSSDDLVVLSGAHTIGFAHCEHFTNRLYDYRGTKKPDPAIDGRLLKELKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLESKLGLLATDQALVSDARMKTMVQSLAKDKQKFFQAFAAAMDKMGSIGVKRGRRHGERRTDSGVVAKRTTQFSSTRTQPLRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGVHDSDTDSDAEYICRKVLNMRLFPNESTSKAWDLNVMQKNYEVLLVSQFTLYGILKGNKPDFHVAMPPQTAKPFYASVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK | 520 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 2451576 | 2456264 | - | CmoCh18G003770.1 | Cmo18g00377 | 402150 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00377 | 520 | MobiDBLite | consensus disorder prediction | 338 | 357 | - | - | |
Cmo18g00377 | 520 | CDD | Dtyr_deacylase | 369 | 516 | IPR003732 | GO:0002161|GO:0005737|GO:0051499 | |
Cmo18g00377 | 520 | PANTHER | PEROXIDASE 19 | 37 | 340 | - | - | |
Cmo18g00377 | 520 | ProSitePatterns | Peroxidases active site signature. | 79 | 90 | IPR019794 | GO:0004601 | |
Cmo18g00377 | 520 | Pfam | Peroxidase | 69 | 315 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | TIGRFAM | TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase | 369 | 516 | IPR003732 | GO:0002161|GO:0005737|GO:0051499 | |
Cmo18g00377 | 520 | Gene3D | - | 369 | 519 | IPR023509 | - | |
Cmo18g00377 | 520 | CDD | secretory_peroxidase | 48 | 351 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo18g00377 | 520 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 210 | 220 | IPR019793 | - | |
Cmo18g00377 | 520 | Gene3D | Peroxidase, domain 2 | 188 | 330 | - | - | |
Cmo18g00377 | 520 | SUPERFAMILY | Heme-dependent peroxidases | 48 | 347 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PANTHER | PEROXIDASE 25-RELATED | 37 | 340 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 143 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 162 | 177 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 285 | 302 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 57 | 76 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 81 | 101 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 325 | 338 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 124 | 137 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 269 | 284 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Plant peroxidase signature | 209 | 221 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | Gene3D | - | 51 | 347 | - | - | |
Cmo18g00377 | 520 | Hamap | D-aminoacyl-tRNA deacylase [dtd]. | 369 | 516 | IPR003732 | GO:0002161|GO:0005737|GO:0051499 | |
Cmo18g00377 | 520 | Pfam | D-Tyr-tRNA(Tyr) deacylase | 370 | 515 | IPR003732 | GO:0002161|GO:0005737|GO:0051499 | |
Cmo18g00377 | 520 | PRINTS | Haem peroxidase superfamily signature | 162 | 174 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Haem peroxidase superfamily signature | 271 | 286 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Haem peroxidase superfamily signature | 79 | 93 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Haem peroxidase superfamily signature | 144 | 161 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | PRINTS | Haem peroxidase superfamily signature | 210 | 225 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | ProSiteProfiles | Plant heme peroxidase family profile. | 47 | 352 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00377 | 520 | SUPERFAMILY | DTD-like | 368 | 516 | IPR023509 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo18g00377 | Cmo-Chr18:2451576 | Cmo15g00076 | Cmo-Chr15:397875 | 6.80E-92 | dispersed | |
Cmo13g00641 | Cmo-Chr13:6843048 | Cmo18g00377 | Cmo-Chr18:2451576 | 7.95E-107 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00377 | K00430 | - | csv:101216263 | 612.838 |