Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00411 ATGGCTGCTGCTGCGATTTTCTCGTCTTTACGAAGAAGGAGATCGCCATCGTTGGAGGCGTTTTTGGCTCCCGTTGATCTCTCCAATGTCGCCTTAGTTCAAACTCTAGGGATCGTTGCGACGGAGCTCGTTTCGCGATTTTCAGAGAAGTCTTTCTTCTTTCAGCGAAGAAATTCCCGATCTCTGATTAGGAAACTTGAGGTTTGTCTCGTATTTTTGGATTGCTTGAAGGATATTGATGCGACTTTGCCTCACACTGCGTTGCTCTGTTTGAAAGAGCTTTATTTATTGTTGTATCGATCTAAAATACTTCTTGATTATTGCTCTGAATCAAGTAAGTTATGGCTGTTGCTTCAGAACCAGACGATTTCAGGGCATTTCAATGATTTGAATTTGGAGTTATTGACATTTTTAGATGTTTTTCCTCTTGAGGAAGTGGAATTAGGAGTGGATGTTAGAGAACAGGTTGAGCTTTTGCAGAAGCAATTGAGAAGGACGAGGATGTTCGTCGATGAACACGTCGAGACGTTGAGGACTCGCTTCCTTTCGTTTCTTGACGAGTTTGAGAACGGTCGGCTTCCAAATCAGAGGGAATTGAGGGAGTTTTTCGTGGATAAGTTGGGGATTCGGAATGCGAAGAGTTGTAGAACTGAAATTGAGTTTCTGGAGGAGCAGATTGTCAATCATGATGGCGACGTCGAGCCCACCGTAGCGGTGTTGAACGGTTTCGTTGCTTTTACGAGATATAGCAGGTTTTTCCTCTTTGGATTCGAGGAAGATGATATTGATTCAGGAGCAGCAAACCAGAAGAAGCTGAAGAAGAATTTGATTATGCAGGAGATTGCTGATACGTTCTTAACAATTCCAAGGGATTTTTGCTGCCCAATATCTCTGGATTTGATGAAAGATCCAGTGATCATTTCTACAGGTCAAACATATGATCGTAGTTCGATCACGAGATGGTTGGAAGAAGGGCACAACACTTGCCCGAAATCAGGGCAAATGCTCGTCCATACCCGTCTCGCTCCGAACCGTGCGTTAGGGAATTTGATCATGCAATGGTGTATAGCACATGGAGTTCCTTATGATCCACCAGAGGGGATGGATGCATCTGTAGAAAGTTATGCAATGGCTTCACCTACACGAGCTGCTCTCGAAGCCAACCGAGCAACAGCTATGATTCTTATTCAACAGTTATCAATTGGGTCACAGGATGCGAAGACGATTGCTGCTCGGGAGATTCGTTTGTTGGCGAAAACGGGGAAAGAAAACCGCGCTTTCATTGCCGAAGCTGGTGCCATCCCTCATCTTCAAAAGTTGCTGACTTCCCCAAACCCAGTAGCACAGGAGAATTCTGTAACAGCTATGCTTAACCTTTCAATATATGACAAGAACAAAAGTTTGATTATGAGCGAGGTAGGGTGCTTAGGATCGATAACCGAAGTGTTGAGATCTGGACATAGTACCGAAGCACGGGAAAACGCTGCGGCTACGTTATTCAGCCTCTCTGCAGTTCATGACTACAAGAAGAGAATAGCAGAGGAGGGTGGTGCAGTTGAAGCCTTAGCAGGGTTGTTGAGAGATGGTACCCCAAGAGGAAAGAAGGATGCTGTAACAGCTTTATTTAACCTCTCGACTCACACGGAGAATTGCGTTCGGATGATCGACGCTGGGGCAGTAACAGCTCTCGTAGAAGCACTGGGGAATGAAGGTGTTGCTGAAGAAGCAGCAGGTGCATTGGCCTTGGTTGTTCGACAGCCGATAGGGGCTGAAGCAGTCGGTAAAGACGAGAGAGCTGTAGCAGGATTGATGGCAATGATGCGATGTGGAACACCAAGAGGAAAAGAGAACGCAGTAGCAGCTTTGCTCGAGTTATGCCGGAGTGGCGGAGCTGCCACGACCGAGCAGGTGTTCAAGGCTCCTGCATTGGCTGGGTTGCTCCAAATGCTCCTATTTACCGGTACCAAGCGAGCAAGAAGAAAGGCTGCTTCGCTAGCTAGAGTGTTCCAAAGATGCGAGCAAGTCACAATGCATTATGCCTATGCAAGTAACTCGACCCCTAACAGGGATTCGAGCTTCCCTAGCGAGGTGTCTGTACCGATATCCATATCGGTACCCGTCGTATAG 2127 46.54 MAAAAIFSSLRRRRSPSLEAFLAPVDLSNVALVQTLGIVATELVSRFSEKSFFFQRRNSRSLIRKLEVCLVFLDCLKDIDATLPHTALLCLKELYLLLYRSKILLDYCSESSKLWLLLQNQTISGHFNDLNLELLTFLDVFPLEEVELGVDVREQVELLQKQLRRTRMFVDEHVETLRTRFLSFLDEFENGRLPNQRELREFFVDKLGIRNAKSCRTEIEFLEEQIVNHDGDVEPTVAVLNGFVAFTRYSRFFLFGFEEDDIDSGAANQKKLKKNLIMQEIADTFLTIPRDFCCPISLDLMKDPVIISTGQTYDRSSITRWLEEGHNTCPKSGQMLVHTRLAPNRALGNLIMQWCIAHGVPYDPPEGMDASVESYAMASPTRAALEANRATAMILIQQLSIGSQDAKTIAAREIRLLAKTGKENRAFIAEAGAIPHLQKLLTSPNPVAQENSVTAMLNLSIYDKNKSLIMSEVGCLGSITEVLRSGHSTEARENAAATLFSLSAVHDYKKRIAEEGGAVEALAGLLRDGTPRGKKDAVTALFNLSTHTENCVRMIDAGAVTALVEALGNEGVAEEAAGALALVVRQPIGAEAVGKDERAVAGLMAMMRCGTPRGKENAVAALLELCRSGGAATTEQVFKAPALAGLLQMLLFTGTKRARRKAASLARVFQRCEQVTMHYAYASNSTPNRDSSFPSEVSVPISISVPVV 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2697402 2699528 + CmoCh18G004110.1 Cmo18g00411 402184

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00411 708 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 17 11 688 - -
Cmo18g00411 708 Pfam Armadillo/beta-catenin-like repeat 422 460 IPR000225 GO:0005515
Cmo18g00411 708 SUPERFAMILY ARM repeat 394 670 IPR016024 -
Cmo18g00411 708 Pfam U-box domain 288 358 IPR003613 GO:0004842|GO:0016567
Cmo18g00411 708 Gene3D - 515 693 IPR011989 -
Cmo18g00411 708 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 362 IPR013083 -
Cmo18g00411 708 SMART Ubox_2 291 354 IPR003613 GO:0004842|GO:0016567
Cmo18g00411 708 CDD RING-Ubox_PUB 292 334 IPR045210 -
Cmo18g00411 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 432 474 IPR000225 GO:0005515
Cmo18g00411 708 Gene3D - 375 514 IPR011989 -
Cmo18g00411 708 SUPERFAMILY RING/U-box 277 362 - -
Cmo18g00411 708 ProSiteProfiles U-box domain profile. 287 361 IPR003613 GO:0004842|GO:0016567
Cmo18g00411 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 517 559 IPR000225 GO:0005515
Cmo18g00411 708 PANTHER U BOX DOMAIN-CONTAINING 11 688 - -
Cmo18g00411 708 SMART arm_5 547 585 IPR000225 GO:0005515
Cmo18g00411 708 SMART arm_5 506 546 IPR000225 GO:0005515
Cmo18g00411 708 SMART arm_5 421 461 IPR000225 GO:0005515
Cmo18g00411 708 SMART arm_5 463 504 IPR000225 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00411 - - - csv:101204151 1179.08
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cmo13g00612 Cmo18g00411 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00311 Cmo-Chr3:4303256 Cmo18g00411 Cmo-Chr18:2697402 4.31E-133 dispersed
Cmo04g03018 Cmo-Chr4:21194295 Cmo18g00411 Cmo-Chr18:2697402 2.14E-121 dispersed
Cmo07g01269 Cmo-Chr7:6957282 Cmo18g00411 Cmo-Chr18:2697402 1.02E-131 dispersed
Cmo15g00157 Cmo-Chr15:726309 Cmo18g00411 Cmo-Chr18:2697402 8.58E-126 dispersed
Cmo18g00411 Cmo-Chr18:2697402 Cmo01g00619 Cmo-Chr1:3195460 5.72E-98 dispersed
Cmo19g00193 Cmo-Chr19:1241081 Cmo18g00411 Cmo-Chr18:2697402 3.34E-09 dispersed
Cmo04g01808 Cmo-Chr4:9107841 Cmo18g00411 Cmo-Chr18:2697402 3.03E-66 transposed
Cmo13g00612 Cmo-Chr13:6686534 Cmo18g00411 Cmo-Chr18:2697402 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g256 . Blo11g00265 . . . . Bma14g00979 . Cmo13g00612 Cmo18g00411 . . . . . Cpe09g00791 . . . . . . . . . . . . . . . . Cone5ag1640 . . . . Chy12g00056 . . . . Bda07g00963 . . . . Sed08g2733 . . Cma13g00582 Cma18g00432 Car13g00466 Car18g00408 . Cpe20g00479 Bhi08g02151 Tan05g2530 Cmetu12g0678 Lac10g0984 Hepe07g1836 . . Cla03g00696 Cam03g0697 Cec03g0670 Cco03g0707 Clacu03g0744 Cmu03g1336 Cre03g0979 Lsi02g00832 Csa01g02298 . Cme12g01264
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo11g01193 . 1 1040 U-box Gene Family AT5G15400 75.8 0.0e+00 1565.4
Cmo14g00572 . 1 1082 U-box Gene Family AT5G15400 73.6 0.0e+00 1561.2
Cmo02g00518 CCT,CST 1 814 U-box Gene Family AT5G67340 50.4 4.3e-121 433.0
Cmo08g00285 . 79 835 U-box Gene Family AT3G54790 52.0 1.7e-131 467.6
Cmo02g00518 CCT,CST 197 814 U-box Gene Family AT2G23140 64.4 1.3e-113 407.9
Cmo20g00999 CCT,CST 214 847 U-box Gene Family AT2G23140 62.9 1.4e-110 397.9
Cmo05g00089 . 1 772 U-box Gene Family AT1G24330 59.2 7.1e-242 834.3
Cmo12g00050 . 1 789 U-box Gene Family AT1G24330 56.6 4.9e-235 811.6
Cmo18g00698 CST 1 760 U-box Gene Family AT1G24330 57.3 2.6e-228 789.3
Cmo04g01920 CST 1 833 U-box Gene Family AT1G24330 51.8 2.4e-213 739.6
Cmo05g00089 . 1 771 U-box Gene Family AT1G67530 59.7 6.3e-238 821.2
Cmo12g00050 . 1 713 U-box Gene Family AT1G67530 61.2 1.4e-232 803.5
Cmo18g00698 CST 1 760 U-box Gene Family AT1G67530 57.3 1.8e-224 776.5
Cmo04g01920 CST 1 833 U-box Gene Family AT1G67530 51.3 3.0e-208 722.6
Cmo07g00279 . 1 362 U-box Gene Family AT4G21350 62.9 1.8e-121 433.3
Cmo03g00526 . 1 362 U-box Gene Family AT4G21350 62.6 1.9e-120 429.9
Cmo19g00194 . 134 458 U-box Gene Family AT3G07360 56.7 2.0e-81 300.1
Cmo02g01708 . 134 455 U-box Gene Family AT3G07360 55.4 1.5e-79 293.9
Cmo04g00047 . 261 456 U-box Gene Family AT1G71020 67.7 1.6e-71 267.7
Cmo04g01075 CCT 244 475 U-box Gene Family AT1G71020 57.5 1.2e-66 251.5
Cmo15g00984 CCT 289 492 U-box Gene Family AT1G71020 54.9 2.4e-54 210.7
Cmo18g00911 . 214 417 U-box Gene Family AT1G71020 53.6 1.0e-49 195.3
Cmo13g00131 . 262 431 U-box Gene Family AT1G71020 58.4 4.4e-48 189.9
Cmo01g00619 . 261 430 U-box Gene Family AT1G71020 58.8 5.7e-48 189.5
Cmo04g01454 . 240 418 U-box Gene Family AT1G71020 53.3 2.9e-44 177.2
Cmo04g00047 . 16 660 U-box Gene Family AT1G23030 54.8 1.6e-103 374.4
Cmo04g01075 CCT 6 675 U-box Gene Family AT1G23030 54.2 7.9e-103 372.1
Cmo01g00619 . 93 635 U-box Gene Family AT2G28830 60.3 2.6e-103 373.6
Cmo13g00131 . 92 432 U-box Gene Family AT2G28830 55.5 3.0e-91 333.6
Cmo01g00619 . 1 635 U-box Gene Family AT3G46510 69.9 5.4e-166 582.0
Cmo13g00131 . 1 638 U-box Gene Family AT3G46510 68.0 1.9e-158 557.0
Cmo18g00911 . 9 624 U-box Gene Family AT3G46510 58.1 9.7e-123 438.3
Cmo04g01454 . 16 620 U-box Gene Family AT3G46510 55.2 8.8e-108 388.7
Cmo18g00911 . 12 626 U-box Gene Family AT3G54850 68.2 4.8e-164 575.5
Cmo04g01454 . 12 623 U-box Gene Family AT3G54850 63.3 5.4e-147 518.8
Cmo01g00619 . 8 630 U-box Gene Family AT3G54850 55.9 2.8e-103 373.6
Cmo20g00715 . 97 650 U-box Gene Family AT5G42340 65.0 5.1e-124 442.6
Cmo07g01269 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cmo03g00311 CST 9 669 U-box Gene Family AT5G01830 57.6 2.2e-199 693.0
Cmo18g00411 CST 1 707 U-box Gene Family AT1G29340 68.1 3.4e-246 848.6
Cmo13g00612 CST 1 710 U-box Gene Family AT1G29340 67.7 5.5e-244 841.3
Cmo06g00526 . 2 407 U-box Gene Family AT3G52450 54.3 6.2e-126 448.4
Cmo03g00273 . 4 422 U-box Gene Family AT3G52450 52.2 1.6e-118 423.7
Cmo07g01224 . 3 403 U-box Gene Family AT3G52450 52.1 7.8e-113 404.8
Cmo06g00526 . 2 406 U-box Gene Family AT2G35930 56.0 9.9e-126 447.6
Cmo03g00273 . 4 422 U-box Gene Family AT2G35930 51.1 2.2e-117 419.9
Cmo07g01224 . 3 403 U-box Gene Family AT2G35930 53.3 1.9e-113 406.8
Cmo04g00519 . 7 420 U-box Gene Family AT3G19380 65.1 3.2e-148 522.3
Cmo04g00519 . 1 420 U-box Gene Family AT1G49780 65.6 2.0e-153 539.7
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G64660 54.3 2.0e-121 433.3
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G09800 51.8 3.0e-106 382.9
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT3G49810 66.0 2.2e-163 572.8
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT3G49810 63.5 4.1e-157 552.0
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT3G49810 61.1 1.3e-147 520.4
Cmo05g00134 CCT,CST 23 430 U-box Gene Family AT3G49810 62.7 6.1e-137 485.0
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT5G65920 65.1 6.7e-160 561.2
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT5G65920 62.7 6.7e-152 534.6
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT5G65920 61.1 1.3e-144 510.4
Cmo05g00134 CCT,CST 19 430 U-box Gene Family AT5G65920 63.9 6.5e-139 491.5
Cmo06g01094 . 82 935 U-box Gene Family AT2G45910 52.4 9.7e-229 790.8
Cmo14g02105 . 1 876 U-box Gene Family AT2G45910 50.3 1.7e-225 780.0
Cmo05g01403 CST 4 725 U-box Gene Family AT2G19410 50.4 7.3e-210 728.0
Cmo15g01416 . 33 815 U-box Gene Family AT4G25160 53.9 1.8e-222 770.0
Cmo11g00121 . 1 496 U-box Gene Family AT5G65200 51.4 2.5e-95 347.1
Cmo15g00326 CST 51 545 U-box Gene Family AT5G40140 57.4 3.8e-96 349.7
Cmo04g02856 CST 56 531 U-box Gene Family AT5G40140 55.5 4.8e-83 306.2
Cmo13g00931 . 29 490 U-box Gene Family AT5G40140 53.7 1.2e-57 221.9
Cmo05g00990 . 4 812 U-box Gene Family AT1G76390 60.0 9.0e-264 907.1
Cmo05g00990 . 13 812 U-box Gene Family AT1G20780 61.6 9.2e-277 950.3
Cmo05g00089 . 1 773 U-box Gene Family AT1G27910 62.2 1.4e-266 916.4
Cmo18g00698 CST 1 769 U-box Gene Family AT1G27910 62.4 1.3e-259 893.3
Cmo12g00050 . 1 797 U-box Gene Family AT1G27910 60.7 1.1e-258 890.2
Cmo04g01920 CST 1 842 U-box Gene Family AT1G27910 55.9 2.9e-243 839.0
Cmo07g00660 . 1 606 U-box Gene Family AT5G67530 73.2 3.6e-262 901.4
Cmo03g00955 . 1 558 U-box Gene Family AT5G67530 78.0 8.1e-254 873.6
Cmo14g02050 . 3 157 U-box Gene Family AT5G67530 52.9 5.6e-45 179.9
Cmo06g01151 . 3 156 U-box Gene Family AT5G67530 52.6 2.8e-44 177.6
Cmo14g01882 CST 1 518 U-box Gene Family AT1G04510 74.7 4.1e-225 778.1
Cmo06g01305 CST 1 516 U-box Gene Family AT1G04510 74.8 1.4e-222 769.6
Cmo06g01305 CST 1 485 U-box Gene Family AT2G33340 73.9 1.3e-209 726.5
Cmo14g01882 CST 1 485 U-box Gene Family AT2G33340 73.3 3.2e-208 721.8
Cmo02g01709 . 11 291 U-box Gene Family AT3G07370 62.6 5.0e-97 351.7
Cmo19g00193 . 10 309 U-box Gene Family AT3G07370 58.3 3.0e-94 342.4
Cmo11g01193 . 1 1040 U-box Gene Family AT5G15400 75.8 0.0e+00 1565.4
Cmo14g00572 . 1 1082 U-box Gene Family AT5G15400 73.6 0.0e+00 1561.2
Cmo02g00518 CCT,CST 1 814 U-box Gene Family AT5G67340 50.4 4.3e-121 433.0
Cmo08g00285 . 79 835 U-box Gene Family AT3G54790 52.0 1.7e-131 467.6
Cmo02g00518 CCT,CST 197 814 U-box Gene Family AT2G23140 64.4 1.3e-113 407.9
Cmo20g00999 CCT,CST 214 847 U-box Gene Family AT2G23140 62.9 1.4e-110 397.9
Cmo05g00089 . 1 772 U-box Gene Family AT1G24330 59.2 7.1e-242 834.3
Cmo12g00050 . 1 789 U-box Gene Family AT1G24330 56.6 4.9e-235 811.6
Cmo18g00698 CST 1 760 U-box Gene Family AT1G24330 57.3 2.6e-228 789.3
Cmo04g01920 CST 1 833 U-box Gene Family AT1G24330 51.8 2.4e-213 739.6
Cmo05g00089 . 1 771 U-box Gene Family AT1G67530 59.7 6.3e-238 821.2
Cmo12g00050 . 1 713 U-box Gene Family AT1G67530 61.2 1.4e-232 803.5
Cmo18g00698 CST 1 760 U-box Gene Family AT1G67530 57.3 1.8e-224 776.5
Cmo04g01920 CST 1 833 U-box Gene Family AT1G67530 51.3 3.0e-208 722.6
Cmo07g00279 . 1 362 U-box Gene Family AT4G21350 62.9 1.8e-121 433.3
Cmo03g00526 . 1 362 U-box Gene Family AT4G21350 62.6 1.9e-120 429.9
Cmo19g00194 . 134 458 U-box Gene Family AT3G07360 56.7 2.0e-81 300.1
Cmo02g01708 . 134 455 U-box Gene Family AT3G07360 55.4 1.5e-79 293.9
Cmo04g00047 . 261 456 U-box Gene Family AT1G71020 67.7 1.6e-71 267.7
Cmo04g01075 CCT 244 475 U-box Gene Family AT1G71020 57.5 1.2e-66 251.5
Cmo15g00984 CCT 289 492 U-box Gene Family AT1G71020 54.9 2.4e-54 210.7
Cmo18g00911 . 214 417 U-box Gene Family AT1G71020 53.6 1.0e-49 195.3
Cmo13g00131 . 262 431 U-box Gene Family AT1G71020 58.4 4.4e-48 189.9
Cmo01g00619 . 261 430 U-box Gene Family AT1G71020 58.8 5.7e-48 189.5
Cmo04g01454 . 240 418 U-box Gene Family AT1G71020 53.3 2.9e-44 177.2
Cmo04g00047 . 16 660 U-box Gene Family AT1G23030 54.8 1.6e-103 374.4
Cmo04g01075 CCT 6 675 U-box Gene Family AT1G23030 54.2 7.9e-103 372.1
Cmo01g00619 . 93 635 U-box Gene Family AT2G28830 60.3 2.6e-103 373.6
Cmo13g00131 . 92 432 U-box Gene Family AT2G28830 55.5 3.0e-91 333.6
Cmo01g00619 . 1 635 U-box Gene Family AT3G46510 69.9 5.4e-166 582.0
Cmo13g00131 . 1 638 U-box Gene Family AT3G46510 68.0 1.9e-158 557.0
Cmo18g00911 . 9 624 U-box Gene Family AT3G46510 58.1 9.7e-123 438.3
Cmo04g01454 . 16 620 U-box Gene Family AT3G46510 55.2 8.8e-108 388.7
Cmo18g00911 . 12 626 U-box Gene Family AT3G54850 68.2 4.8e-164 575.5
Cmo04g01454 . 12 623 U-box Gene Family AT3G54850 63.3 5.4e-147 518.8
Cmo01g00619 . 8 630 U-box Gene Family AT3G54850 55.9 2.8e-103 373.6
Cmo20g00715 . 97 650 U-box Gene Family AT5G42340 65.0 5.1e-124 442.6
Cmo07g01269 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cmo03g00311 CST 9 669 U-box Gene Family AT5G01830 57.6 2.2e-199 693.0
Cmo18g00411 CST 1 707 U-box Gene Family AT1G29340 68.1 3.4e-246 848.6
Cmo13g00612 CST 1 710 U-box Gene Family AT1G29340 67.7 5.5e-244 841.3
Cmo06g00526 . 2 407 U-box Gene Family AT3G52450 54.3 6.2e-126 448.4
Cmo03g00273 . 4 422 U-box Gene Family AT3G52450 52.2 1.6e-118 423.7
Cmo07g01224 . 3 403 U-box Gene Family AT3G52450 52.1 7.8e-113 404.8
Cmo06g00526 . 2 406 U-box Gene Family AT2G35930 56.0 9.9e-126 447.6
Cmo03g00273 . 4 422 U-box Gene Family AT2G35930 51.1 2.2e-117 419.9
Cmo07g01224 . 3 403 U-box Gene Family AT2G35930 53.3 1.9e-113 406.8
Cmo04g00519 . 7 420 U-box Gene Family AT3G19380 65.1 3.2e-148 522.3
Cmo04g00519 . 1 420 U-box Gene Family AT1G49780 65.6 2.0e-153 539.7
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G64660 54.3 2.0e-121 433.3
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G09800 51.8 3.0e-106 382.9
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT3G49810 66.0 2.2e-163 572.8
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT3G49810 63.5 4.1e-157 552.0
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT3G49810 61.1 1.3e-147 520.4
Cmo05g00134 CCT,CST 23 430 U-box Gene Family AT3G49810 62.7 6.1e-137 485.0
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT5G65920 65.1 6.7e-160 561.2
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT5G65920 62.7 6.7e-152 534.6
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT5G65920 61.1 1.3e-144 510.4
Cmo05g00134 CCT,CST 19 430 U-box Gene Family AT5G65920 63.9 6.5e-139 491.5
Cmo06g01094 . 82 935 U-box Gene Family AT2G45910 52.4 9.7e-229 790.8
Cmo14g02105 . 1 876 U-box Gene Family AT2G45910 50.3 1.7e-225 780.0
Cmo05g01403 CST 4 725 U-box Gene Family AT2G19410 50.4 7.3e-210 728.0
Cmo15g01416 . 33 815 U-box Gene Family AT4G25160 53.9 1.8e-222 770.0
Cmo11g00121 . 1 496 U-box Gene Family AT5G65200 51.4 2.5e-95 347.1
Cmo15g00326 CST 51 545 U-box Gene Family AT5G40140 57.4 3.8e-96 349.7
Cmo04g02856 CST 56 531 U-box Gene Family AT5G40140 55.5 4.8e-83 306.2
Cmo13g00931 . 29 490 U-box Gene Family AT5G40140 53.7 1.2e-57 221.9
Cmo05g00990 . 4 812 U-box Gene Family AT1G76390 60.0 9.0e-264 907.1
Cmo05g00990 . 13 812 U-box Gene Family AT1G20780 61.6 9.2e-277 950.3
Cmo05g00089 . 1 773 U-box Gene Family AT1G27910 62.2 1.4e-266 916.4
Cmo18g00698 CST 1 769 U-box Gene Family AT1G27910 62.4 1.3e-259 893.3
Cmo12g00050 . 1 797 U-box Gene Family AT1G27910 60.7 1.1e-258 890.2
Cmo04g01920 CST 1 842 U-box Gene Family AT1G27910 55.9 2.9e-243 839.0
Cmo07g00660 . 1 606 U-box Gene Family AT5G67530 73.2 3.6e-262 901.4
Cmo03g00955 . 1 558 U-box Gene Family AT5G67530 78.0 8.1e-254 873.6
Cmo14g02050 . 3 157 U-box Gene Family AT5G67530 52.9 5.6e-45 179.9
Cmo06g01151 . 3 156 U-box Gene Family AT5G67530 52.6 2.8e-44 177.6
Cmo14g01882 CST 1 518 U-box Gene Family AT1G04510 74.7 4.1e-225 778.1
Cmo06g01305 CST 1 516 U-box Gene Family AT1G04510 74.8 1.4e-222 769.6
Cmo06g01305 CST 1 485 U-box Gene Family AT2G33340 73.9 1.3e-209 726.5
Cmo14g01882 CST 1 485 U-box Gene Family AT2G33340 73.3 3.2e-208 721.8
Cmo02g01709 . 11 291 U-box Gene Family AT3G07370 62.6 5.0e-97 351.7
Cmo19g00193 . 10 309 U-box Gene Family AT3G07370 58.3 3.0e-94 342.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008312 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 2 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo18g00411 Cmo_Chr18 FPKM 35.032051 33.833961 14.96304 19.115772 1.154305 0.812305 1.296466 10.554749 8.334397 8.196404