Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00422 | ATGGTAGTCGAAGAGACGATCAAGGTTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGCAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCAAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGTATGTATGCTGCCACATAGGACGATGCGAAGAAACTCGACAGACATGCGAAGAGCCGGTATACCGTATGATCGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACACATCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTGTGTGGAAATCGCCATTGCTGCACATTACAAGCACCTGAATCTCGGATTCTTGTTCTGTACTTGA | 885 | 46.78 | MVVEETIKVPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHVCMLPHRTMRRNSTDMRRAGIPYDRFNPSPSSKHTTHHTSPSVEQCFVRFDLEFCVEIAIAAHYKHLNLGFLFCT | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 2777211 | 2779990 | - | CmoCh18G004220.1 | Cmo18g00422 | 402195 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00422 | 294 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 19 | 220 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Cmo18g00422 | 294 | Pfam | Eukaryotic initiation factor 4E | 61 | 213 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Cmo18g00422 | 294 | SUPERFAMILY | eIF4e-like | 56 | 219 | IPR023398 | - | |
Cmo18g00422 | 294 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cmo18g00422 | 294 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 51 | 232 | IPR023398 | - | |
Cmo18g00422 | 294 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 116 | 139 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 | |
Cmo18g00422 | 294 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 | 19 | 220 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo13g00599 | Cmo18g00422 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g01033 | Cmo-Chr8:6716511 | Cmo18g00422 | Cmo-Chr18:2777211 | 2.83E-69 | dispersed | |
Cmo17g00144 | Cmo-Chr17:812362 | Cmo18g00422 | Cmo-Chr18:2777211 | 1.88E-68 | dispersed | |
Cmo14g01118 | Cmo-Chr14:7593714 | Cmo18g00422 | Cmo-Chr18:2777211 | 5.21E-30 | transposed | |
Cmo13g00599 | Cmo-Chr13:6626533 | Cmo18g00422 | Cmo-Chr18:2777211 | 1.28E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00422 | K03259 | - | csv:101206312 | 417.157 |