Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00422 ATGGTAGTCGAAGAGACGATCAAGGTTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGCAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCAAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGTATGTATGCTGCCACATAGGACGATGCGAAGAAACTCGACAGACATGCGAAGAGCCGGTATACCGTATGATCGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACACATCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTGTGTGGAAATCGCCATTGCTGCACATTACAAGCACCTGAATCTCGGATTCTTGTTCTGTACTTGA 885 46.78 MVVEETIKVPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHVCMLPHRTMRRNSTDMRRAGIPYDRFNPSPSSKHTTHHTSPSVEQCFVRFDLEFCVEIAIAAHYKHLNLGFLFCT 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2777211 2779990 - CmoCh18G004220.1 Cmo18g00422 402195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00422 294 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 19 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo18g00422 294 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo18g00422 294 SUPERFAMILY eIF4e-like 56 219 IPR023398 -
Cmo18g00422 294 MobiDBLite consensus disorder prediction 1 36 - -
Cmo18g00422 294 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 232 IPR023398 -
Cmo18g00422 294 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cmo18g00422 294 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 19 220 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00599 Cmo18g00422 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01033 Cmo-Chr8:6716511 Cmo18g00422 Cmo-Chr18:2777211 2.83E-69 dispersed
Cmo17g00144 Cmo-Chr17:812362 Cmo18g00422 Cmo-Chr18:2777211 1.88E-68 dispersed
Cmo14g01118 Cmo-Chr14:7593714 Cmo18g00422 Cmo-Chr18:2777211 5.21E-30 transposed
Cmo13g00599 Cmo-Chr13:6626533 Cmo18g00422 Cmo-Chr18:2777211 1.28E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00422 K03259 - csv:101206312 417.157