Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00478 | ATGAGGAAATGGAATCTGTTATGGCCGTTTTGGGCCATAACGATTGTTCATGGTGTTGCGATTCTGATATTCGTTAAAGGATTTCTTCTTACTCGTACTGAGCTTCCTTTTTACAGTCGCTGCTCCGATGTTTCTCAGTCTCCCTGTTTCACTTCCGATTCACTTTCTGACAGCAATCCTTCGGTTCCTCCTTCCTCCGGTGCAGCGAATTCCAGCCGGTGCTGGACCAAGCCCGCCGTTAACCGCATCATCATCATTGTTTTTGACGCTCTACGGTTTGATTTTGTTGCTCCCAGTACATTCTTTGAAGAATCGAAACCATGGATGGATAAGTTACGAGTACTGCACAAGATGGCATCAGAACGGGGTTTGTCTGCCAAGATTTTCAAAGCTATTGCTGATCCACCCACAACGAGTTTGCAGCGATTGAAGGGCATTACGACTGGAGGACTTCCAACATTTATTGATGTTGGAAACAGCTTTGGTGCTCCAGCAATTATTGAAGACAACTTGATTCATCAGCTTGTTCAGAATGGAAAACGTGTGGTGATGATGGGTGATGACACATGGATGCAATTGTTTCCTCATCATTTTAAAAAAGCATTTCCCTATCCCTCGTTTAATGTTAAAGATCTTCATACGGTAGACAATGGATGCATTGAACATCTTCTTCCATCCTTGTATGAAGATGATTGGGATGTTCTTATCGCACATTTTCTTGGTGTGGATCATGCTGGGCATATATTTGGTGTTGATTCAAGTCCAATGATTGAAAAGCTGGAGCAGTATAATTCTATTTTAGAGAAAGTAGTGGATGTGCTGGAAAGGCAATCTGAACCGGGTGGGTTACATGAAAATACTCTTCTTCTTGTGATGGGTGATCATGGACAAACTTTGAATGGCGATCACGGTGGAGGAAGTGCAGAAGAGGTTGAGACGTCTCTATTTGCTATGAGCTTTAAGAAGCCTCCAGCATCCGTACCATCTGAATTTGGCACTTCTTCTTGTCAACTAGATTTGCTTGATTTCCCAGTGACATTATCTGCATTGCTTGGAATTCCTTTTCCTTTTGGAAGCATTGGGCGTGTAAATCCTGAGTTATATGCTCTAGGTGCTGGTACATGGAAGTTGGAAGGTATGAAGGTTGGAAACTACATAAATAGCAGAGAACAGGAAGAATGGATGCAGAATTACGTCAATGTACTTTGTATCAACTCCTGGCAGAGCAATAGTTTCCTCAATCTGGCCATTCATTTGAACGATGATATTGATAAGGTGAAAAGGTATATTGATAATTATACTGCTTCATCAGTCATTGGATTTTCTGATGAAGACTTGCTTCACACTGGTAGTTTGTATGCTGATGCAATGGAAAATTGGTCTTACATTTCAAAAGACTTATTATCTAATAGTGACGGAATGGATGTTGTACCTTCTCTTAAGAGGCAAATTGACGCATACTCTAATTTCCTAGCGAGTATTGCTGAGTTAGCACGCTCTAAATGGACAGAATTTAATTTAAAATTGATGACTCTTGGTTTCGGCATTATGGTAGCATCACTTTTTGTCCATTTCATTGCTATAAAGAGGGTTGGCAAACAATGCGGCAGCTCTTTTGCAACTGAAGATTGTGGAACAACTTTCGAGTTAATGCTTTCTTGCTTCATGGTGGCCATGCGTGCATGCAGCTTTCTCTCAAATAGCTTCATTTTGGAAGAAGGAAAAGTGACAAGTTTTCTTTTGGCTACTACCGGCATTTTCATGCTACGATATTCAATCACAAAGCAGAAACATTTTCTAAACGTCTTCATTTTCCTTCTTTTGATGATCTACTGTAGATTTACAATTGAAGTTGGTCTATTGAAGCAGGCCGATACTTCTGCATTCTTGAAAGCTTATCCTTCATGGGTGCTTGAAATTGCATCCCTACTGCCTGGTTGGACTTACATAACCAAATCTGTGCCAATTATTGCACTCATATTATTGGCACAGTTGCTTCTTAAAAACATTACTAGCAGCCATTCAAAGGGAGTATGGAAGTTCGTTATGTATGGAACAATTTTGTGTTATATCCTTATTGGATTCCATTGGGCTCTAGAAAATGAGGTGTTGCATTTTGCTTCTGCTATTGAGGGCATTGGAAAAAATTGCATTCCTAGAATAATCTATGCTATTGGACTAGGACAACTGTCATTACTACTATTTAGGCAACTATTTGGTGAAGACAAACTTTTAGACTGCAGAATAACTTTATTAACCAAAACAGCCGCCATGTTAGCTGCATGGAGTCCAACAATTATTATTCTAGCGGGAAAGCAAGGTTCCTTGGTGGCTTTGGCATCTCTTATTGGAGGATATTGCATAATAGGCATGGACAATCTAAAACACGGAGAGGATGGAAATGGTAGAATTCTGACAGTTGACTGTCTTCCTGTAACGCAGTGGAGCTTGTTTGCTATCTGTCTCTTCTTTAGCTCTGGCCACTGGTGTGCTTTTGATGGCCTTCGCTATGGTGCTGCATTTATTGGGTTCGATGAGTTCGTTCTCGTTCGACAAGCAATCCTTCTCACAATCGATACGTTTGGCTTCTCAGTCATCCTTCCAATTTTCGGACTTCCTTTCATTGTTGCAAAGAAATATTCATCTAGTCAGGCTTCAAAAGGGGAAAACACTCTCTTCATGCGCTTATCTCAAGCTTACTTGATGTATGGGCTCATAATGGCGGTTCCAGTTACAGCTTCTATATTGTGTGTCATAATTCAAAGGCGGCATTTGATGAGCGGGGAGCTAAGTTGGAATTCGATCTTGGCTTGTTCTGAAATGGACAATGCTGATATTGAGAGCGGGGAAGAGGATTTTCATGGGCAGAGGGGAAGGAAATATCGCCCTGTTGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCCATGGATCCGGGGCCCGCATCCTCTACGCCTTCCATTACCACGCGGCATCCTTCTATGAATGTGAATTTTGGGTTTGGATTTGCAGCGTTGTTTCTTAATCGTTATCATGATGTTATGAAGGTAAAAGTGGGTTCTCAGACAGGCACTGATGGAAAAGAAGGGAACTCTCTTACTCTCGTCGAAATTAATGGCCCCCAGGGAGAATCCAAGCTGGAGTTTTTTGGTTTTGATTCTCTTGTCAATATTCTAGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCACCTTCTAGTCCTCGAGATGGTGAGAATGTTTCGATCTCTCAGGGGTTGCCAAAGAACGAGGAAGTCAAATCGGGAACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATTGTCGGCATGGCTGGGATTGGTGAGTCATTAGTGCTGGTGGCATTTTGTGGTTTATGTACGTTCTTGACTTCAATTTCACTGAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGGATGCTGTACCATCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGATCAACTGTTGAACCAATTCAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATCGTGACGATTTTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTAGTTTGCATATTTCTTGGAATTTTTCTGGCCAAGAAAAACGACCCTGCAGATGGTGTCACAGGGTTGAGTATGGATACTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACTAACAGTGCTGGAATTCCCGATCCTCAGGGAAACGTATATTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGATCTAATAGATCAGCTTCACTGAAGGATACTCAACGTTCAATTCCTATGGGAACATTGTTTGCGACTCTTTTGACAACTATATTGTATCTGGTCTCTGTGCTGTTGTTTGGAGCACTGGCAACCAGAAAGAGATTGTTAACAGATAGGCTTTTTACTGCTACAGTCGCGTGGCCTTTCCCAGCAATTATTTATGTTGGAATCATTTTATCAACCCTTGGAGCTGCTCTTCAGAGCTTGACAGGAGCCCCCCGCTTACTAGCAGCCATAGCCAATGATAATATATTACCCATTCTAAACTATTTTAAAGTAGAAGATGGCTGTGAGCCATACTTTGCAACCCTCTTTACTGCAATTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACCGTAACCATGTTTTTCCTATTGTGCTACGCTGGCGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGATGCTCCCAGTTGGCGTCCACGATGGAAATTTCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCATGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCGTATTTCCAACTTGCTCTCCGCAGCCTTCGTTCACTTGGAGCGAGCCAAGTTCACCCAAAGAATTGGTATCCCATACCGTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTTCCTTGTCACCCAAAACTTGCGGACTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTGTCCATACTAGATGGAGACTACCATGAGCGGGTTGAAGATTCCAAAGCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGTTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCTCTATGTCTGAAGGCTTCAGGGGGATTGTTCAGACGATGGGTCTTGGCAATCTCAAGCCTAATATCATAGTTATGCGATATCCAGAAATCTGGCGTCGCGAAAATCTAACCGAGATTCCTGCTACTTTCGTTGGAATAATCAATGACTGCATTGATGCTAACAAGGCTGTTGTGATTGTTAAGGGTCTGGATGAATGGCCTAATGAATATCAGAGGCAGTATGGAACTATAGACTTGTATTGGATTGTGAGGGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTCACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCTGAGGAGGATTCTGATGCCGAGGCCCTCAAAGCTGATGTCAAAAAGTTCTTGTATGATCTTCGGATGCAAGCCGAGGTGATCGTTATAACGATCAAATCATGGGACACCACACAAGTGGAGGGCGGGCAACAAGACGAATCAATCGAAGCGTTCACCGCTGGTCAAGGCAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCTGCTGCTGAAAGCAGAGCAACCACACTAGTGGCTGATGGGAAGCCTGTGAATGTGAATGAGAAACAAGTACAGAAATTTCTAAACACAACTCTCAAGTTGAACTCGAGCATTCTGAGATACTCGAGGATGGCTGCGGTCGTGCTCGTCAGCCTCCCGCCACCTCCGCCCAACCATCCTGCCTACTTCTATATGGAGTACTTGGACTTGTTGGTTGAGAATGTGCCGAGGCTATTGATCGTAAGAGGATATCGTAGAGACGTCGTAACGTTGTACACGTAG | 5829 | 42.61 | MRKWNLLWPFWAITIVHGVAILIFVKGFLLTRTELPFYSRCSDVSQSPCFTSDSLSDSNPSVPPSSGAANSSRCWTKPAVNRIIIIVFDALRFDFVAPSTFFEESKPWMDKLRVLHKMASERGLSAKIFKAIADPPTTSLQRLKGITTGGLPTFIDVGNSFGAPAIIEDNLIHQLVQNGKRVVMMGDDTWMQLFPHHFKKAFPYPSFNVKDLHTVDNGCIEHLLPSLYEDDWDVLIAHFLGVDHAGHIFGVDSSPMIEKLEQYNSILEKVVDVLERQSEPGGLHENTLLLVMGDHGQTLNGDHGGGSAEEVETSLFAMSFKKPPASVPSEFGTSSCQLDLLDFPVTLSALLGIPFPFGSIGRVNPELYALGAGTWKLEGMKVGNYINSREQEEWMQNYVNVLCINSWQSNSFLNLAIHLNDDIDKVKRYIDNYTASSVIGFSDEDLLHTGSLYADAMENWSYISKDLLSNSDGMDVVPSLKRQIDAYSNFLASIAELARSKWTEFNLKLMTLGFGIMVASLFVHFIAIKRVGKQCGSSFATEDCGTTFELMLSCFMVAMRACSFLSNSFILEEGKVTSFLLATTGIFMLRYSITKQKHFLNVFIFLLLMIYCRFTIEVGLLKQADTSAFLKAYPSWVLEIASLLPGWTYITKSVPIIALILLAQLLLKNITSSHSKGVWKFVMYGTILCYILIGFHWALENEVLHFASAIEGIGKNCIPRIIYAIGLGQLSLLLFRQLFGEDKLLDCRITLLTKTAAMLAAWSPTIIILAGKQGSLVALASLIGGYCIIGMDNLKHGEDGNGRILTVDCLPVTQWSLFAICLFFSSGHWCAFDGLRYGAAFIGFDEFVLVRQAILLTIDTFGFSVILPIFGLPFIVAKKYSSSQASKGENTLFMRLSQAYLMYGLIMAVPVTASILCVIIQRRHLMSGELSWNSILACSEMDNADIESGEEDFHGQRGRKYRPVEAHDRAVLEMSSMDPGPASSTPSITTRHPSMNVNFGFGFAALFLNRYHDVMKVKVGSQTGTDGKEGNSLTLVEINGPQGESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSISQGLPKNEEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLDAVPSAGIFRETVTKVNGSTVEPIQSPSSHDLQVYGIIVTIFLCFIVFGGVKMINRVAPAFLIPVLFSVVCIFLGIFLAKKNDPADGVTGLSMDTFKENWSSDYQMTNSAGIPDPQGNVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPMGTLFATLLTTILYLVSVLLFGALATRKRLLTDRLFTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDNILPILNYFKVEDGCEPYFATLFTAILCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDSKAACKQLATYIDYKRCEGVAEIVVAPSMSEGFRGIVQTMGLGNLKPNIIVMRYPEIWRRENLTEIPATFVGIINDCIDANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEALKADVKKFLYDLRMQAEVIVITIKSWDTTQVEGGQQDESIEAFTAGQGRIASYLGEMKAAAAESRATTLVADGKPVNVNEKQVQKFLNTTLKLNSSILRYSRMAAVVLVSLPPPPPNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLYT | 1942 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 3263640 | 3293593 | + | CmoCh18G004780.1 | Cmo18g00478 | 402251 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00478 | 1942 | Pfam | Amino acid permease | 1100 | 1574 | IPR004841 | GO:0016020|GO:0055085 | |
Cmo18g00478 | 1942 | Pfam | Type I phosphodiesterase / nucleotide pyrophosphatase | 106 | 299 | IPR002591 | - | |
Cmo18g00478 | 1942 | Gene3D | Amino acid/polyamine transporter I | 1093 | 1557 | - | - | |
Cmo18g00478 | 1942 | PANTHER | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS | 957 | 1941 | IPR004842 | GO:0006811|GO:0015377|GO:0016021 | |
Cmo18g00478 | 1942 | SUPERFAMILY | Alkaline phosphatase-like | 81 | 362 | IPR017850 | - | |
Cmo18g00478 | 1942 | TIGRFAM | 2a30: K-Cl cotransporter | 1037 | 1942 | IPR004842 | GO:0006811|GO:0015377|GO:0016021 | |
Cmo18g00478 | 1942 | Coils | Coil | 257 | 277 | - | - | |
Cmo18g00478 | 1942 | Pfam | Solute carrier family 12 | 1609 | 1730 | IPR018491 | GO:0006811|GO:0016020|GO:0022857 | |
Cmo18g00478 | 1942 | Pfam | Solute carrier family 12 | 1741 | 1941 | IPR018491 | GO:0006811|GO:0016020|GO:0022857 | |
Cmo18g00478 | 1942 | Gene3D | Alkaline Phosphatase, subunit A | 65 | 323 | IPR017850 | - | |
Cmo18g00478 | 1942 | CDD | GPI_EPT_3 | 77 | 364 | IPR037675 | GO:0006506|GO:0051377 | |
Cmo18g00478 | 1942 | PANTHER | CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 | 957 | 1941 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo13g00527 | Cmo18g00478 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g00574 | Cmo-Chr7:2581574 | Cmo18g00478 | Cmo-Chr18:3263640 | 5.79E-47 | transposed | |
Cmo13g00527 | Cmo-Chr13:6164214 | Cmo18g00478 | Cmo-Chr18:3263640 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00478 | K14427 | - | csv:101216218 | 1765.36 |