Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo18g00529 | ATGTCTCTTTGTTCATCATTTTTCATTCAAGTTCTTGATTTTTCTTGTCCAATAATGCAAACTGGGCCTCACCACGCAGCAGAAGAAGATGCCTTTCGCGAGGAAAATAACAAGCTCACAATTTATCCGAGAGGTTTTAATATCACATGGGGCAATGATGAGCGTTATTGGCGTATTGTCAACTCCGACGAGCCGGTGGCCGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGCTCAACTGATAAAGTAGAGTTTGGAAAGAGGTACAATGTGGGTTTCAATGTTTCACTAAGGCCAGATGCATTTGGATGGAAGGGGCTTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGAAACTTCTTCCCTAAGAAAGTGTCTCTTGGAGACGACCACCCAGAGCAAAAGTTTATCATTCCTAGGACGCCTTTAGTAATCTCAATTGATCGTTCAACAGCCAAAGAGAAAAGCATCCACCTTGGGTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGAAGATCCACAATGCATTCATTGAGAAGGTTGACTAA | 561 | 42.6 | MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD | 186 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 3902413 | 3904325 | + | CmoCh18G005290.1 | Cmo18g00529 | 402302 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo18g00529 | 186 | Pfam | Phloem protein 2 | 39 | 182 | IPR025886 | - | |
| Cmo18g00529 | 186 | PANTHER | PROTEIN PHLOEM PROTEIN 2-LIKE A9 | 28 | 182 | - | - | |
| Cmo18g00529 | 186 | PANTHER | - | 28 | 182 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo18g00529 | Cmo-Chr18:3902413 | Cmo18g00533 | Cmo-Chr18:3978826 | 4.25E-58 | dispersed | |
| Cmo18g00529 | Cmo-Chr18:3902413 | Cmo18g00530 | Cmo-Chr18:3920590 | 4.57E-47 | tandem | |
| Cmo13g00461 | Cmo-Chr13:5668078 | Cmo18g00529 | Cmo-Chr18:3902413 | 3.18E-07 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo18g00529 | - | - | csv:101222726 | 203.756 |