Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00540 ATGGCTAATCTTTTCGTTCTCAATTTCCCAACGTGCAGTTCCAGCTTGAGGCGTGTCTCTGCTTTACCTTCATCCAATGGCGCTCATCCGTTATCGGCAGGCAGTGGACCAGTGATCCTGGAGCTTCCTCTGGAGAAGATACGGAGGCCATTAATGAGGACCAGAGCTAACGATCCCGATAAAGTCAAAGACCTAATGGACAGTATACAAGAAATCGGGCTACAAGTACCCATTGATGTACTTGAAGTTGATGGAGTTTATTACGGTTTCTCTGGTTGTCATCGTTACGAGGCTCATCAATGCCTCAGACTTCCTACAATACGCTGCAAAGTTCGCCGTGGAACCAAAGAAACTCTGAGGCACCACCTACGTTGA 375 47.47 MANLFVLNFPTCSSSLRRVSALPSSNGAHPLSAGSGPVILELPLEKIRRPLMRTRANDPDKVKDLMDSIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQCLRLPTIRCKVRRGTKETLRHHLR 124
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4109986 4113113 - CmoCh18G005400.1 Cmo18g00540 402313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00540 124 PIRSF Sulfiredoxin 2 124 IPR016692 GO:0032542
Cmo18g00540 124 SMART ParB_7 40 119 IPR003115 -
Cmo18g00540 124 Gene3D - 37 124 - -
Cmo18g00540 124 SUPERFAMILY ParB/Sulfiredoxin 32 123 IPR036086 -
Cmo18g00540 124 Pfam ParB/Sulfiredoxin domain 41 117 IPR003115 -
Cmo18g00540 124 CDD Srx 39 123 - -
Cmo18g00540 124 PANTHER UNCHARACTERIZED 7 124 IPR016692 GO:0032542
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00452 Cmo-Chr13:5580129 Cmo18g00540 Cmo-Chr18:4109986 9.60E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00540 K12260 - csv:101217757 222.246