Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00599 ATGGCGGAAAATGTTTCTCTCGAGGAGTTCCTAGGAACTGCAGTCGATGCCGCTAAGAAAGCCGGAGAGGTAATTCGTAAGGGATTCTATCAGACCAAGCATATAGAGCACAAAGGGCAGGTTGACTTGGTCACTGAAACTGACAAGGCTTGTGAAGATCTCATATTTAATTATCTCAAGGACCATTACCCTTCACATAAGTTCATTGGGGAAGAAACTACTGCTGCTTTTGGTCATACTGAGTTAACCGATGAACCAACGTGGATTGTCGATCCTCTTGATGGAACTACAAACTTTGTTCATGGGTTCCCTTTTGTGTGTGTTTCTATTGGTCTGACCATTGGAAAGGTTCCCACGGTTGGAGTCGTCTACAATCCAATTATTGATGAGCTTTTTACTGGAATTCGTGGAAAAGGTGCCTTCCTTAATGGTAGGCCTATTAAAGTATCCTCCCAAGACGAATTGTTGAAGTCTCTTCTTGTATCTGAGGTTGGGACCAAACGTGACAAGTCGACTGTAGATGCTACTACAGACAGAATTAATCGTTTGCTTTTGAAGGTGAGATCAATTCGGATGAGTGGTTCCTGTGCGCTGAACCTCTGTGGGGTAGCCTGTGGAAGGATCGATTTGTTTTTCGAAACTGGTTTTGGAGGTCCCTGGGATGTCGCTGCTGGAGCTGTTATTGTCACCGAAGCTGGTGGGCTCGTGTTTGATCCATCTGGCGAGGATTTTGACATAACATCACAGAGGGTAGCAGCTTCCAATCCTGTTGTGAAAGATGCATTTGTGGAGGCTTTGGGGATGTAA 807 44.98 MAENVSLEEFLGTAVDAAKKAGEVIRKGFYQTKHIEHKGQVDLVTETDKACEDLIFNYLKDHYPSHKFIGEETTAAFGHTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPTVGVVYNPIIDELFTGIRGKGAFLNGRPIKVSSQDELLKSLLVSEVGTKRDKSTVDATTDRINRLLLKVRSIRMSGSCALNLCGVACGRIDLFFETGFGGPWDVAAGAVIVTEAGGLVFDPSGEDFDITSQRVAASNPVVKDAFVEALGM 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5597727 5601988 - CmoCh18G005990.1 Cmo18g00599 402372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00599 268 CDD IMPase 10 255 IPR033942 GO:0008934|GO:0046855
Cmo18g00599 268 Gene3D - 1 146 - -
Cmo18g00599 268 ProSitePatterns Inositol monophosphatase family signature 1. 88 101 IPR020583 -
Cmo18g00599 268 PRINTS Inositol monophosphatase superfamily signature 42 62 IPR000760 GO:0046855
Cmo18g00599 268 PRINTS Inositol monophosphatase superfamily signature 64 80 IPR000760 GO:0046855
Cmo18g00599 268 PRINTS Inositol monophosphatase superfamily signature 88 104 IPR000760 GO:0046855
Cmo18g00599 268 PRINTS Inositol monophosphatase superfamily signature 137 160 IPR000760 GO:0046855
Cmo18g00599 268 PRINTS Inositol monophosphatase superfamily signature 185 206 IPR000760 GO:0046855
Cmo18g00599 268 PRINTS Inositol monophosphatase superfamily signature 217 241 IPR000760 GO:0046855
Cmo18g00599 268 PANTHER INOSITOL MONOPHOSPHATASE 3 1 266 - -
Cmo18g00599 268 Gene3D - 148 267 - -
Cmo18g00599 268 Pfam Inositol monophosphatase family 7 262 IPR000760 GO:0046855
Cmo18g00599 268 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 21 40 IPR020552 GO:0046854
Cmo18g00599 268 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 139 157 IPR020552 GO:0046854
Cmo18g00599 268 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 162 172 IPR020552 GO:0046854
Cmo18g00599 268 PANTHER INOSITOL MONOPHOSPHATASE 1 266 - -
Cmo18g00599 268 SUPERFAMILY Carbohydrate phosphatase 7 266 - -
Cmo18g00599 268 ProSitePatterns Inositol monophosphatase family signature 2. 220 234 IPR020550 GO:0046854
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01784 Cmo18g00599 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00604 Cmo-Chr3:5714734 Cmo18g00599 Cmo-Chr18:5597727 2.42E-154 dispersed
Cmo18g00599 Cmo-Chr18:5597727 Cmo20g00837 Cmo-Chr20:4178136 2.10E-19 dispersed
Cmo13g00419 Cmo-Chr13:5205366 Cmo18g00599 Cmo-Chr18:5597727 1.22E-30 wgd
Cmo13g00404 Cmo-Chr13:5118586 Cmo18g00599 Cmo-Chr18:5597727 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00599 K10047 - csv:101217972 506.523