Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00635 ATGAGTGGCATGAATCAACAACATCCCACCAAAAAAAGGCTCATGCCAATCTCACCCTCAGTAGCTCTACAAATTTCTCATCCACAAAGCATGATACAAGCTTTCTCAGCTCCTCCTTTAAGAAGAGGGAGACGCCCGTCGATGTCTGCAGCAAACAACAACTCCGCCATGGCTACTTGCATTCGGGATTTGGTAGAAGACGAGGAACACATTTTCCGTAGCCAACTTCCTGAGGTCCAAGTGCCTGATGATATCACATTGCCGGAGTTTGTACTTCAGAATGCTGAATCATATGCTGATAATGTGGCATTTGTGGAAGCTGTGAGCGGAAAGGCGTACACTTATCGTGAAGTTGTGAGAGACACGAGTAGGTTCGCTAAGGCCTTAAGCTCTCTGAGGTTGAAGAAGGGGCAGGTCGTTATTGTCGTTCTACCCAACGTTGCTGAATATGCCATTGTTGCTTTAGGGATAATGGCTGCTGGAGGTGTGTTTTCTGGTGTGAATCCAGCAGCTCACATATCCGAAATCAAAAAGCAGGTGGAGGTAGCAGACGCCAAACTCGTCGTTACAAACAGCTCAAGCTTTGAAAAGGTAAAGGAATTAAAGCTTCCAGTGATCGTAGTAGGGGAGGAACTGATTGAAGGTTCCATGAACTGGCACAAACTGCTCGAAGCTGCGGACCGAGCGGGCAACAATTTCGTCAAAGAAGATATCAAGCAGACTGATTTATGTGCCCTTCCTTTCTCATCAGGCACTACAGGAGTTTCCAAAGGTGTAATGCTAACTCATCGAAATCTAGTGGCTAACTTGTGTTCTACGCTCTCGGGCGTGCCGCAAGAAATGGTGGGCAAGGTCACGACGTTAGGCCTCATCCCGTTCTTCCACATTTACGGGATTACCGGAATATGTTGTGCCACACTTCGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTTAGAACCTTCATCAATGCCCTGATAACACAGGAGGTCACATTTGCTCCAATTGTTCCTCCTATCATCTTGGCCTTGGTTAAGAATCCTATTGTGAAGGAATTCGATCTAAGCGGTCTCAAACTTCAGGCTATCATGACTGCAGCTGCTCCGCTCGCACCCGAACTTCAAACGTCCTTTGAGAAAAAGTTCCCGGGCGTGGATGTTCAAGAGGCATATGGGCTTACCGAGCACAGCTGCATCACTCTCAACTATGGAAGCATAGGCAAAGACAATCTCGCTGCAAAGAAAAACACAGTCGGTCGCATTCTTCCTAATCTAGAAGTCAAATTCATTGACCCCGACAGCGGCAGGTCGCTGCCGAAGAACACGCCTGGGGAAATCTGTGTAAGAAGCCAGTGTGTAATGCAAGGCTACTACAATAATGAAGAGGAGACTTCAAGGACCATCGACGACAAAGGCTGGATGCACACGGGCGACATCGGATACATCGACGACGATGGCGATGTGTTTATTGTGGATCGTATTAAAGAGTTGATTAAGTACAAAGGCTTTCAAGTAGCTCCGGCCGAGTTAGAGGCAATCCTCCTTACTCATCCCTCGATTGAAGATGCAGCTGTGGTGCCGCTGCCAGACAAAGAAGCCGGTGAGATCCCAGCAGCAAGCATTGTAATGGCTCCAAATGCAAAAGAAACCGAAGACGAAATAATCAAATACGTCGCCTCAAACGTTGCACATTACAAGAAAGTTAGGCTCGTTCATTTTGTCGAAACGATCCCGAAATCGCCGTCTGGGAAAGTCATGAGGAGGTTGATCAAAGAGAAGATGATCGAAAAGATTCGAGCCGAGGCGGCCTCTTGA 1821 47.28 MSGMNQQHPTKKRLMPISPSVALQISHPQSMIQAFSAPPLRRGRRPSMSAANNNSAMATCIRDLVEDEEHIFRSQLPEVQVPDDITLPEFVLQNAESYADNVAFVEAVSGKAYTYREVVRDTSRFAKALSSLRLKKGQVVIVVLPNVAEYAIVALGIMAAGGVFSGVNPAAHISEIKKQVEVADAKLVVTNSSSFEKVKELKLPVIVVGEELIEGSMNWHKLLEAADRAGNNFVKEDIKQTDLCALPFSSGTTGVSKGVMLTHRNLVANLCSTLSGVPQEMVGKVTTLGLIPFFHIYGITGICCATLRNKGKVVVMGRFDLRTFINALITQEVTFAPIVPPIILALVKNPIVKEFDLSGLKLQAIMTAAAPLAPELQTSFEKKFPGVDVQEAYGLTEHSCITLNYGSIGKDNLAAKKNTVGRILPNLEVKFIDPDSGRSLPKNTPGEICVRSQCVMQGYYNNEEETSRTIDDKGWMHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVPLPDKEAGEIPAASIVMAPNAKETEDEIIKYVASNVAHYKKVRLVHFVETIPKSPSGKVMRRLIKEKMIEKIRAEAAS 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8064232 8066630 - CmoCh18G006350.1 Cmo18g00635 402408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00635 606 Gene3D - 69 497 IPR042099 -
Cmo18g00635 606 CDD 4CL 81 590 - -
Cmo18g00635 606 Pfam AMP-binding enzyme C-terminal domain 511 586 IPR025110 -
Cmo18g00635 606 SUPERFAMILY Acetyl-CoA synthetase-like 72 599 - -
Cmo18g00635 606 ProSitePatterns Putative AMP-binding domain signature. 246 257 IPR020845 -
Cmo18g00635 606 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 63 599 - -
Cmo18g00635 606 Gene3D - 498 600 IPR045851 -
Cmo18g00635 606 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 63 599 - -
Cmo18g00635 606 Pfam AMP-binding enzyme 93 502 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g00635 Cmo-Chr18:8064232 Cmo08g00565 Cmo-Chr8:3461332 4.02E-141 dispersed
Cmo18g00635 Cmo-Chr18:8064232 Cmo05g00699 Cmo-Chr5:3587233 1.71E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00635 K01904 - csv:101220731 1013.45