Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00674 | ATGTCAACAAAGGTCATTGCCTTAGGCCTCATACTGTTCTTCAGCTTCGCATCGCTTAGCTTTGGAGCTCTTCAAGTGGGGTTTTACAAAGGAAAATGTGGGTTTAGAGATGTTGAATCCATTGTTGCCGGTGTTGTTGCCGACGCCGTTGAAAATGATGGCACTCTTGTAGCTGCTCTTCTTCGCTTGCAGTTCCATGATTGCTTTGTGTCTGGATGCGACGCTTCCCTACTCCTCGATGGGAGCGATAGCGAGAAGCTCGCTCCGCCGAATTTGAGCGTTAGAGGGTATGATTTGATTGATGAAGTTAAGATTGCTGTGGAGAGTGTTTGTCCTGGCGTTGTCTCGTGTGCTGATATTATAGCTATGGCTACCAGAGATGCTGTTCATTTGGCTGGAGGAGCACGATACCGTGTCGAAACTGGACGGAGAGACGGGTTCAAACCGGCGAAAAATGTGGATCTTCCGGGGCCTTCGATTTCAGTTCCAGACTCCATTGAAGCCTTCTCTGATAGGAACCTTACTGCTACAGATATGGTTTATCTTCTTGGCGGCCATACCGTTGGTGTATCACAATGCTTATTCTTCAAGGATCGCCTCTATAACTACAAGAAGACAGGGAGACCTGACCCGACCATCGACTCGTGGTTTCTCGGCAACCTAAGAGACCAATGTCCTGAAGATTCTAACGACAACAACGTCGTATTTCTCGACCAAACCAGTATGAGTTCTTTCGTCGTTGACAAGTCATTTCACAAGCAAATATGGCAACGAAGAGGCATACTGGAAATCGATCAACAACTTGCTTTGCATCCGTTAACGAAGGATTTGGTGACGAGGGTGGCGTTCGGATTCGACTTCGCTTCCAAATTTGGAGATGCCATGATCAAGATGGGAAGATTTGGAGTTCTCACTGGGTCTGATGGGGAGATTAGAAGAACATGTGAGGCTGTTAATTCAGCATGGTGA | 969 | 47.06 | MSTKVIALGLILFFSFASLSFGALQVGFYKGKCGFRDVESIVAGVVADAVENDGTLVAALLRLQFHDCFVSGCDASLLLDGSDSEKLAPPNLSVRGYDLIDEVKIAVESVCPGVVSCADIIAMATRDAVHLAGGARYRVETGRRDGFKPAKNVDLPGPSISVPDSIEAFSDRNLTATDMVYLLGGHTVGVSQCLFFKDRLYNYKKTGRPDPTIDSWFLGNLRDQCPEDSNDNNVVFLDQTSMSSFVVDKSFHKQIWQRRGILEIDQQLALHPLTKDLVTRVAFGFDFASKFGDAMIKMGRFGVLTGSDGEIRRTCEAVNSAW | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 8586581 | 8588580 | - | CmoCh18G006740.1 | Cmo18g00674 | 402447 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00674 | 322 | CDD | secretory_peroxidase | 24 | 318 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo18g00674 | 322 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 319 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 178 | 188 | IPR019793 | - | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 35 | 54 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 59 | 79 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 95 | 108 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 114 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 133 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 177 | 189 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 254 | 271 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Plant peroxidase signature | 293 | 306 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | Pfam | Peroxidase | 44 | 282 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | Gene3D | Peroxidase, domain 2 | 156 | 298 | - | - | |
Cmo18g00674 | 322 | PRINTS | Haem peroxidase superfamily signature | 57 | 71 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Haem peroxidase superfamily signature | 115 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Haem peroxidase superfamily signature | 133 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PRINTS | Haem peroxidase superfamily signature | 178 | 193 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | Gene3D | - | 28 | 319 | - | - | |
Cmo18g00674 | 322 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 319 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PANTHER | PEROXIDASE 25-RELATED | 14 | 317 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo18g00674 | 322 | PANTHER | PEROXIDASE | 14 | 317 | - | - | |
Cmo18g00674 | 322 | ProSitePatterns | Peroxidases active site signature. | 57 | 68 | IPR019794 | GO:0004601 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00194 | Cmo-Chr8:1131803 | Cmo18g00674 | Cmo-Chr18:8586581 | 4.89E-71 | dispersed | |
Cmo18g00674 | Cmo-Chr18:8586581 | Cmo19g00285 | Cmo-Chr19:2076516 | 4.26E-79 | dispersed | |
Cmo18g00674 | Cmo-Chr18:8586581 | Cmo11g01911 | Cmo-Chr11:13273050 | 5.36E-72 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00674 | K00430 | - | csv:101210173 | 457.218 |