Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00685 ATGAAGCTTCTTATTCTTGCCACCCTCACAATAAGCTCACTCCTCTTCCCTTTCACCTTCCTCAATTTCCTCTTTTGCTCTCTCCTCGCCCTCTCTCTCAGCTTCTGGCTCATCCCCGGTGGGTTTGCATGGCGCAACCACCACCGCTCCTCCGCCAACCTTCCCGGTCCCTCTGGCTGGCCGTTACTCGGAACGCTCCCACAAATGGGGCCACTCGCTCACCGAAATCTTGCTGCCATTGCACACTCCTTCAAAGCCACTCGTCTCATGTCCTTCAGCTTGGGTACCACTAGAGCCATCATAAGTAGTCACCCCGACACGGCCAAGCAGATCCTCTGTAGCTCAGCTTTCTCCGACCGCCCCGTCAAGCAATCAGCTCGACTCATGATGTTCGAGCGAGCCATCGGTTTCGCTCCCAATGGAGTCTATTGGCGTAATCTTCGACGAATCGCTGCAAACCACATGTTTTCCCCACGAAGAATCTCCGACCTGGAAGGGCTCAGAAGAGAGGTCGGCGTTGAAATGACAGAGGAGATGTCGAGAAATATGGCCATTGACGGGGTAGTGAGGCTAAGAGAAGTCCTCCAGAAGCATACGCTGAAGAACATAATAGAGAGCGTGTTTGGAAGTGATTTTAAAACGGAAAGAAAGAACCAACTTAGTGAAATGGTGAGAGAAGGGTATGAATTGATAGCTATGTTCAATTGGGAAGATCATTTTCCGGTCAGTTTCTTGGATTTTGGTGGAGTGAAAAGGAAGTGCCATGAATTGGCGGGCAGGGTTAGTGTAGCAGTCGGGCAGATTGTTGAAGAGAGAAAAAGAGACAAAAATGAGGCGAAAAATGACTTTCTTAGTGCTTTGCTTACTTTACCAAAGGAGGATCAGCTGAATGATTCAGACATGGTGGCTGTTCTATGGGAAATGATATTTCGTGGAACCGATACGATTGCCATACTCTTAGAATGGATCATGGGCAGGATGATATTACACCCAGAAATCCAAGCCAAAGCTCGAGAGGAGATCGACACGTGCGTAGGTTCCAACAGGCACGTGCGTGATTCCGACATTCCCAACCTCCCTTACCTCCAAGCCATAGTAAAGGAAGTTCTCCGTTTACACCCTCCAGGTCCATTACTGTCGTGGGCCCGTCTGGCAATCCATGATGTCCACGTGGACAAGGTCTTAATCCCAGCTGGCACCACGGCAATGGTGAACATGTGGGCCATAGCTCATGACCCCTCCATATGGAAAGACCCATGGACATTCCGGCCAGAGCGGTTCATTGAAGACGACATGTCGATTATGGGTTCGGATTTGAGGCTGGCGCCGTTCGGTGCTGGGCGGAGGGCGTGCCCGGGAAGGGCGTTGGGTCTAGCCACTGTGCATCTATGGTTGGCCACTTTTCTGCAACGGTTCGAATGGGTTCCGTGTTCGACAAAGCCGGTTAATTTGTCGGAATGTTTGAAGCTGTCCCTTGAAATGAAAAAAGCTTTGGAGTGTTGTGTGGTTAGTCGGTGA 1518 50.53 MKLLILATLTISSLLFPFTFLNFLFCSLLALSLSFWLIPGGFAWRNHHRSSANLPGPSGWPLLGTLPQMGPLAHRNLAAIAHSFKATRLMSFSLGTTRAIISSHPDTAKQILCSSAFSDRPVKQSARLMMFERAIGFAPNGVYWRNLRRIAANHMFSPRRISDLEGLRREVGVEMTEEMSRNMAIDGVVRLREVLQKHTLKNIIESVFGSDFKTERKNQLSEMVREGYELIAMFNWEDHFPVSFLDFGGVKRKCHELAGRVSVAVGQIVEERKRDKNEAKNDFLSALLTLPKEDQLNDSDMVAVLWEMIFRGTDTIAILLEWIMGRMILHPEIQAKAREEIDTCVGSNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVLIPAGTTAMVNMWAIAHDPSIWKDPWTFRPERFIEDDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLATFLQRFEWVPCSTKPVNLSECLKLSLEMKKALECCVVSR 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8754063 8755888 - CmoCh18G006850.1 Cmo18g00685 402458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00685 505 SUPERFAMILY Cytochrome P450 55 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 Gene3D Cytochrome P450 43 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 7 505 - -
Cmo18g00685 505 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 Pfam Cytochrome P450 55 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PANTHER CYTOCHROME P450 78A7-RELATED 7 505 - -
Cmo18g00685 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cmo18g00685 505 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00685 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g01109 Cmo-Chr13:9082814 Cmo18g00685 Cmo-Chr18:8754063 0 dispersed
Cmo18g00685 Cmo-Chr18:8754063 Cmo20g01128 Cmo-Chr20:10922050 2.77E-162 dispersed
Cmo18g00685 Cmo-Chr18:8754063 Cmo12g00085 Cmo-Chr12:453319 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00685 - - csv:101212611 868.611