Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo18g00687 | ATGGCCGACGATTGTCCAGATAAGAATATCCTCCAGAGCACTGCTCTTCTCCAGTATATACTGGAAGCCAATTCCTATCCGAGAGAGCACGAACAGTTGAAGGAACTCAGAGAAACCACACTCCGAAAGTTCGACAAGTCCTTGAGCGTGATGAGTGTACCGGGGGATCAAGGATTGTTTCTCTCAATGCTTCTGAAACTGATGAACGCAAAGAAAACGATAGAGATCGGCGTATTCACCGGCTATTCGCTCCTAACCACTGCGCTAGCGCTGCCCGCTGATGGTCAGATAACAGCCATTGATGTAAACAGAGCATCATTTGAGATCGGTTTGCCATTTATCAAAAAGGCAGGAGTTGATCACAAGATCAATTTTGTGGAATCACAGGCATTGATTGTCCTCAACAACCTCATCAATGACGACGCGAAAACAGAATTTGATTTTGCATTTGTGGATGCTGTGAAAGGAGAGTACATTAAGTATCACGAGTTCCTTTTAAGATTGGTGAAAGTAGGTGGAGTAATTGCATATGACAATACTTTATGGTATGGATCAGTGGCGCAAAGTGATGACGTTGTTCAGGATGATTTGAAAGCTAATAGAAGCCATATACGGGAATTCAATGCTTTTTTAGTTAATGATTCACGTGTGGAGATAGCTCTCCTCTCCATTGGAGATGGTCTCACTCTTTGCCGACGTGTCAAGTAA | 708 | 43.36 | MADDCPDKNILQSTALLQYILEANSYPREHEQLKELRETTLRKFDKSLSVMSVPGDQGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRASFEIGLPFIKKAGVDHKINFVESQALIVLNNLINDDAKTEFDFAFVDAVKGEYIKYHEFLLRLVKVGGVIAYDNTLWYGSVAQSDDVVQDDLKANRSHIREFNAFLVNDSRVEIALLSIGDGLTLCRRVK | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 8768982 | 8770762 | - | CmoCh18G006870.1 | Cmo18g00687 | 402460 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo18g00687 | 235 | PANTHER | FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE | 7 | 234 | - | - | |
| Cmo18g00687 | 235 | Pfam | O-methyltransferase | 26 | 234 | IPR002935 | GO:0008171 | |
| Cmo18g00687 | 235 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 9 | 234 | IPR002935 | GO:0008171 | |
| Cmo18g00687 | 235 | CDD | AdoMet_MTases | 74 | 177 | - | - | |
| Cmo18g00687 | 235 | Gene3D | Vaccinia Virus protein VP39 | 1 | 235 | IPR029063 | - | |
| Cmo18g00687 | 235 | PANTHER | O-METHYLTRANSFERASE-RELATED | 7 | 234 | - | - | |
| Cmo18g00687 | 235 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 17 | 233 | IPR029063 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo18g00687 | Cmo-Chr18:8768982 | Cmo18g00692 | Cmo-Chr18:8802403 | 2.38E-143 | dispersed | |
| Cmo18g00687 | Cmo-Chr18:8768982 | Cmo18g00688 | Cmo-Chr18:8774301 | 3.24E-45 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo18g00687 | K00588 | K13272 | csv:101212121 | 355.14 |