Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo18g00690 | ATGGCCGGCGATTCTAAGAACATCCTCCAGTGTCCTGCTCTTCTCCAGTATATACTGGAAGAGAATTCGTATCCGAGAGAGCACGAACAGTTGAAGGAGCTCAGAGAAACCACGTTAGAAACGTTCAAGTACTGGAGCCTGATGAGCGTACCGGCGGATCAAGGATTGTTTCTATCGATGCTTCTGAAACTGATGAACGCAAAGAAAACGTTAGAGATCGGCGTATTCACTGGCTATTCGCTCCTTACCACTGCGCTAGCACTGCCCGCTGATGGTCAGATTATAGCCGTTGATGTGAATAGAGATTCATTCGAGATTGGCTTGCCATTTATAAAAAAAGCTGGAGTTGATCATAAGATCAATTTTGTAGAATCACATGGAATGCCTGTCCTCAACGACCTCCTCAATGACGGAAAAGAAGGAGAATTTGATTTTGCATTTGTGGATGCTAATAAAGATGAGTACATTAAATATCACGAATTGCTTTTGAAATTGGTGAAAATTGGCGGCATAATTGCCTATGACAATACCCTGTGGTTTGGAACAGTGGCACAGAGCGACGACGTTGTTGAGGAGAAATTAAAGGCTAGTAGAGGCCATACGCGAGAACTCAATGCTTTTCTTGTTAATGACTCGCGCGTTGAGATAGCTCTCCTCTCAGTTGGAGATGGCCTCACTCTCTGCCGACGTATTAAGTAA | 699 | 44.06 | MAGDSKNILQCPALLQYILEENSYPREHEQLKELRETTLETFKYWSLMSVPADQGLFLSMLLKLMNAKKTLEIGVFTGYSLLTTALALPADGQIIAVDVNRDSFEIGLPFIKKAGVDHKINFVESHGMPVLNDLLNDGKEGEFDFAFVDANKDEYIKYHELLLKLVKIGGIIAYDNTLWFGTVAQSDDVVEEKLKASRGHTRELNAFLVNDSRVEIALLSVGDGLTLCRRIK | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 8788657 | 8791724 | - | CmoCh18G006900.1 | Cmo18g00690 | 402463 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo18g00690 | 232 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 7 | 231 | IPR002935 | GO:0008171 | |
| Cmo18g00690 | 232 | PANTHER | O-METHYLTRANSFERASE-RELATED | 4 | 231 | - | - | |
| Cmo18g00690 | 232 | PANTHER | FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE | 4 | 231 | - | - | |
| Cmo18g00690 | 232 | Pfam | O-methyltransferase | 24 | 231 | IPR002935 | GO:0008171 | |
| Cmo18g00690 | 232 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 15 | 230 | IPR029063 | - | |
| Cmo18g00690 | 232 | Gene3D | Vaccinia Virus protein VP39 | 3 | 232 | IPR029063 | - | |
| Cmo18g00690 | 232 | CDD | AdoMet_MTases | 71 | 174 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo11g01362 | Cmo-Chr11:9517591 | Cmo18g00690 | Cmo-Chr18:8788657 | 1.22E-88 | dispersed | |
| Cmo18g00690 | Cmo-Chr18:8788657 | Cmo19g00622 | Cmo-Chr19:6813678 | 8.05E-87 | dispersed | |
| Cmo18g00690 | Cmo-Chr18:8788657 | Cmo18g00692 | Cmo-Chr18:8802403 | 1.58E-153 | proximal | |
| Cmo18g00689 | Cmo-Chr18:8781950 | Cmo18g00690 | Cmo-Chr18:8788657 | 1.61E-139 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo18g00690 | K00588 | K13272 | csv:101212121 | 329.717 |