Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo18g00692 | ATGGCCGACGATTCTAAGAAGAACATCCTTCAGTGCCCTGCTCTTCTCCAGTACATACTGGAAGAGAATTCGTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGAGAAACCACGTTAGAAACGTTCAAGTCCCGGAGCGTGATGAGCGTACCGGCGGATCAAGGATTGTTTTTATCAATGCTTCTGAAATTGATGAACGCAAAGAAAACGATCGAGATCGGCGTATTCACTGGCTATTCGCTCCTTACCACTGCGCTAGCACTGCCCGCTGATGGTCAGATTACTGCTATTGATATAAGCAGAGAATCATTCGAGGTTGGCTTACCGTTCATAAAAAAGGCCGGAGTTGATCATAAGATCAATTTTGTAGAATCACAAGCATTGATCGTCCTCAACGATCTCCTCAATGACGGAAAAGAAGGAGAATTTGATTTTGTGTTTGTGGATGCTGATAAAGGAGAGTACATTAAATATCACGAATTGCTTATGAAATTGGTGAAAGTCGGTGGAGTAATTGCTTATGACAATACCCTATGGTTTGGAACAGTGGCACAGAGTGACGACGTTGTTGATGAGAAATTAAAGGCTAGTAGAAACCATATACGAGAACTTAATGCTTTTCTTGTTAATGACTCGCGCGTTGAGATAGCTCTACTCTCCGTTGGAGATGGCATCACTCTCTGCAGACGTATTGAGTAA | 702 | 42.88 | MADDSKKNILQCPALLQYILEENSYPREHEQLKELRETTLETFKSRSVMSVPADQGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDISRESFEVGLPFIKKAGVDHKINFVESQALIVLNDLLNDGKEGEFDFVFVDADKGEYIKYHELLMKLVKVGGVIAYDNTLWFGTVAQSDDVVDEKLKASRNHIRELNAFLVNDSRVEIALLSVGDGITLCRRIE | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 8802403 | 8803881 | - | CmoCh18G006920.1 | Cmo18g00692 | 402465 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo18g00692 | 233 | Gene3D | Vaccinia Virus protein VP39 | 1 | 233 | IPR029063 | - | |
| Cmo18g00692 | 233 | CDD | AdoMet_MTases | 72 | 175 | - | - | |
| Cmo18g00692 | 233 | PANTHER | O-METHYLTRANSFERASE-RELATED | 5 | 232 | - | - | |
| Cmo18g00692 | 233 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 15 | 231 | IPR029063 | - | |
| Cmo18g00692 | 233 | PANTHER | FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE | 5 | 232 | - | - | |
| Cmo18g00692 | 233 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 8 | 232 | IPR002935 | GO:0008171 | |
| Cmo18g00692 | 233 | Pfam | O-methyltransferase | 25 | 232 | IPR002935 | GO:0008171 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g00690 | Cmo-Chr4:3425434 | Cmo18g00692 | Cmo-Chr18:8802403 | 4.02E-46 | dispersed | |
| Cmo18g00687 | Cmo-Chr18:8768982 | Cmo18g00692 | Cmo-Chr18:8802403 | 2.38E-143 | dispersed | |
| Cmo18g00688 | Cmo-Chr18:8774301 | Cmo18g00692 | Cmo-Chr18:8802403 | 1.34E-49 | dispersed | |
| Cmo18g00689 | Cmo-Chr18:8781950 | Cmo18g00692 | Cmo-Chr18:8802403 | 6.50E-143 | dispersed | |
| Cmo18g00692 | Cmo-Chr18:8802403 | Cmo19g00622 | Cmo-Chr19:6813678 | 2.09E-86 | dispersed | |
| Cmo18g00690 | Cmo-Chr18:8788657 | Cmo18g00692 | Cmo-Chr18:8802403 | 1.58E-153 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo18g00692 | K00588 | K13272 | csv:101212121 | 347.436 |