Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00696 ATGATGAAGAAGACTCTGTTGTTTCTCCTCTTCATTTTTCACTTTCATGTCTCGTGCAAGGTTTTAGCCCTTTCGCCGGACGGTCTCTCGCTTCTTTCTCTCAAGTCAGCGGTTGATCAGTCGCCTGATTCATCTATTTTCTCTGATTGGAACGAGAATGACTCCACGCCTTGCCGATGGTCTGGCATTTCTTGCATGAATGTTTCCGGTGATTCGCGTGTGGTTGGGATTGCTCTCTCTGGTAAGAATCTCCATGGCTATATTCCTTCTGAGCTTGGTTCGCTTGTTTATCTCCGGCGATTGAACCTCCATAACAATAATTTTTACGGCTCGATACCGGAGCAGTTGTTTAATGCTACCTCTTTGCATAGCTTATTTCTCTATAGTAATAATCTCTCTGGTCCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCTAACAATTCTTTCGCTGGACCAATCCCCGACGAATTGAAGAATTGTAAGCAATTGCAGCGTTTGATACTCGCTAGAAATCAATTTGAAGGAGAAATTCCTTCTGGTGTGTGGTCCGAGATGGATAATTTACATCAACTCGACCTCTCATCCAACGATTTCAGTGGACCGATTCCGGAAGATTTGGGGGAACTGACGACACTTTCCGGTACCCTCAACCTGTCCTTCAATCATTTATCGGGAAAAATTCCGAAGACGCTAGGAGATTTGCCGGTGACGGTGAGTTTCGACCTCCGGAGCAACAATTTGAGTGGAAGCATACCTCAGACTGGTTCTTTTGCAAATCAGGGACCAACTGCATTTCTCAACAATCCTAAGTTGTGCGGATTTCCTCTTCAGAAATCCTGTGGGAGTTCAGAGCGTGGCTCACCGGGAAATCCGGCTTCTAGGCCTTCGTACAATGCCCCTGGAAAAGGCTTGGGCGCCGGATTAATCATTCTCATCTCTGCCGCCGATGCCGCCGGAGTGGCGTTTATCGGCCTGGTAATAGTATACATATATTGGCGAAGTAAAGACAATCCGAACGGCTGTAGCTGTACGTCCAAAGGAAAACTCGGAGGGAACCAGAAAAACGATCTATGCAATTTTCCTTGTATGAATGGACATGATAAGAACGAGGAGTCCGAAATGGAGGAACAGGAGAACAGTGACGGAAACAGAGAAGAAGGAGGGCTTGTGGCCATAGACAAAGGCTTTACGTTCGAGCTGGACGAGCTGCTGAGAGCATCGGCCTATGTGCTGGGAAAGAGTGGATTGGGGATTGTGTACAAAGTGGTGCTCGGAAATGGGATTCCGGTGGCCGTACGGCGGCTGGGCGAAGGCGGAGAACAGAGGTATAAGGAGTTCGCGGCGGAGGTGCAGGCCATTGGAAGGGTAAAACATCCCAATATTGTGAAACTGAGAGCTTATTACTGGGCGCCAGATGAGAAGCTCTTGATCAGTGATTTTATCTCCAATGGAAACTTGGCCTCTGCACTTCGTGGGAGAAACGGGCAGCCATCTTCAACCCTTTCATGGTCAACCAGACTACGAATTGGCAAGGGAACTGCAAGGGGGTTGGCCTATCTCCACGAGTGCAGCCCAAGAAAGTTCGTCCATGGCGACATCAAGCCCTCCAACATCCTCCTCGACAACGAATTCCGCCCCCACATCTCCGACTTCGGCCTCAACAGGTTGATCACCATCACCGGCAACAATCCCTCCTCCTCTGGCGGCCTCATCGGCGGCGCCTTCTCCTATCTCAAATCCGCCCCAACCGACCGCAACAACAACTACTGCGCTCCGGAGGCTCGAGCTCCCGGCGCCCGCCCTACCCAAAAATGGGACGTCTATTCCTTCGGTGTCATGGTCCTCGAATTGCTCACCGGAAAGCCGCCGGAGCTTTCTCCGAACGGGTCGAGTTCTTTGGAGATTCCGGATTTGGTGAGGTGGGTCAGGCAAGGGTTTGAAGAAGCTAAGCCGTTGTCGGATTTGGTTGACCCTTCTCTTCTACAAGAAGTACATGCCAAGAAAGAGGTGCTTGCTGTATTCCACGTGGCGCTCGCCTGTACAGAGAGTGACCCGGAAGTTCGGCCCAGAATGAAAACGGTGTCGGAGAGTTTCGACAGGATTGGATGA 2130 50.23 MMKKTLLFLLFIFHFHVSCKVLALSPDGLSLLSLKSAVDQSPDSSIFSDWNENDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVYLRRLNLHNNNFYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSFAGPIPDELKNCKQLQRLILARNQFEGEIPSGVWSEMDNLHQLDLSSNDFSGPIPEDLGELTTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPKLCGFPLQKSCGSSERGSPGNPASRPSYNAPGKGLGAGLIILISAADAAGVAFIGLVIVYIYWRSKDNPNGCSCTSKGKLGGNQKNDLCNFPCMNGHDKNEESEMEEQENSDGNREEGGLVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGRNGQPSSTLSWSTRLRIGKGTARGLAYLHECSPRKFVHGDIKPSNILLDNEFRPHISDFGLNRLITITGNNPSSSGGLIGGAFSYLKSAPTDRNNNYCAPEARAPGARPTQKWDVYSFGVMVLELLTGKPPELSPNGSSSLEIPDLVRWVRQGFEEAKPLSDLVDPSLLQEVHAKKEVLAVFHVALACTESDPEVRPRMKTVSESFDRIG 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8827292 8831710 - CmoCh18G006960.1 Cmo18g00696 402469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00696 709 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Cmo18g00696 709 SUPERFAMILY Protein kinase-like (PK-like) 417 702 IPR011009 -
Cmo18g00696 709 Gene3D Ribonuclease Inhibitor 26 187 IPR032675 -
Cmo18g00696 709 Pfam Leucine rich repeat 98 155 IPR001611 GO:0005515
Cmo18g00696 709 CDD STKc_IRAK 418 708 - -
Cmo18g00696 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 709 - -
Cmo18g00696 709 ProSiteProfiles Protein kinase domain profile. 412 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo18g00696 709 Pfam Protein kinase domain 417 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo18g00696 709 Gene3D Transferase(Phosphotransferase) domain 1 488 709 - -
Cmo18g00696 709 Gene3D Ribonuclease Inhibitor 188 289 IPR032675 -
Cmo18g00696 709 SUPERFAMILY L domain-like 29 284 - -
Cmo18g00696 709 Gene3D Phosphorylase Kinase; domain 1 404 487 - -
Cmo18g00696 709 SMART serkin_6 416 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo18g00696 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Cmo18g00696 709 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 709 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01922 Cmo18g00696 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02173 Cmo-Chr4:15831220 Cmo18g00696 Cmo-Chr18:8827292 0 dispersed
Cmo07g01352 Cmo-Chr7:7651621 Cmo18g00696 Cmo-Chr18:8827292 3.56E-172 dispersed
Cmo15g00059 Cmo-Chr15:342965 Cmo18g00696 Cmo-Chr18:8827292 9.11E-140 dispersed
Cmo18g00696 Cmo-Chr18:8827292 Cmo18g01006 Cmo-Chr18:10958254 0 dispersed
Cmo18g00696 Cmo-Chr18:8827292 Cmo04g01922 Cmo-Chr4:9813402 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75065 PF00069 Pkinase 1.10E-30 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00696 - - cmax:111466327 1368.6