Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00711 ATGCAAATCAGTGATAAAAATCAGTGGGTTTTGTTCATTTTCTTTGATCTTCAAATGGGTTTTCCTCGTTTTTTGGTTTTGATTCTTCTCGTCGTTTCTTCAGTCGATTGTCAGGTTAAAGAGTTCATCAGTATAGACTGTGGCGGCTCCAAGAACTACACCGACCCAGTTACAGGTCTGGCATGGATATCCGACGCCGGAGTCATGGATGCCGGTGGCTCATCGCCGGTGGAAAACCCACATGGGAACTTGATGCAGTATGGAACACGGCGGGATTTTCCGATCGACGACAAGAAATACTGCTACACTTTGGAAACAGAGGAACGGAGAAGGTATTTGGTTCGAGCAACTTTTCAGTATGGGAGTTTGAAGAATGAAGAAACTTACCCTAAATTTGATCTTTATTTGGATGCAACTAAGTGGTCGACTGTTACTATTTTTGATGCTTCGAGGGTTTATGTGAAGGAGATGATCATTAGAGCACCTTCAAGTTCATTTGATGTGTGCATATGCTGTGCTACTACTGGCTATCCGTTCATATCAACTCTTGAGCTACGCCCTTTTAACCTTTCGATGTATGCTACTGATTTTGAAGATGATTTCTTCTTGGAAGTAGCTGCTAGAGTGAACTTTGGTGCTTTGAGCAAGGATGTGATTAGGTACCCAGATGATCCATATGACAGAATTTGGGATTCAGATCTTGAGAAGAGGCAAAATTATCTTGTGGGAGTAGCTCCAGGGACAGAGAGAATCAGTACTATGAACAACATTAATGTAATGACAAGAGAATATCCGCCTGTTAAGGTGATGCAAACAGCAGTTCTTGGCACAAAGGGAGTGCTCAGCTACAGGTTGAATTTGGATGATTTTCCTGCCAATGCCAGAGCTTATGCATATTTTGCTGAAATAGAAGAATTGGGTCGGAATGAGACTCGGAAGTTCAAATTAGAGGAACCGAACATTCCCGACTCGAGTAATGCAGTGGTGAATATTGCTGAGAATGCCAATGGGACCTATACTCTTTATGAACCGAGTTATATGAATGTCTCTTTGAGTTTTGTGCTTTCGTTCTCCTTCGTCAAGACTCGAGATTCAACACGAGGACCGCTTTTGAATGCATTGGAAATTAGCAGATATGTCGAGATTGATGCCAAGACCGATGGGCGAGATGAGGCTGTTGTAAATGCCTTACGTACCATGTCAGCGGAGAGCGTTCAGACAAATCAAGGCGATCCCTGTGTTCCAACGAGCTGGGAATGGGTGACATGTACTGCCACGAAACCACCGAGAATATCGAAAATTGAGCTCTCCAGAAGGAACGTCAAGGGCGATATTCCTCCCGAGATCAATACTATGGACGGATTAACAGAATTGTGGTTAGATGGTAATTTCCTTGCAGGATCACTGCCCGACATGAGTAATCTAGTAAATTTGAAGATTTTACATCTAGAGAACAACAAATTGACAGGGACATTGCCTTCTTACCTGGGTACTTTGCCCAACTTACAGGAACTATATATTCAAAACAACGCTTTCTCGGGCGAAATACCGTTGGAGTTATTGGCAAAGAAACTCGTGTTTAAGTACGACGGTAACCTCGGGCTGCATGCAAGTAAACGATACAACATGCATTCTAAAGTTATAATAGGAGTTTCATTGGGAGTGCTTGTACTTCTGATACTTCTACTTGTAGGAAGTTTTCTATTACTCCACAAGCTTCGAAGACGGACGACGCCTTATCATAAAAAAGGTGGTTCTCTGAAAGGCAGCACAAAACGCTCTTTTGGCTACTCGATCGGCAAGGGGGACGAAGGCATTGCCTACTACTTATCTCTCGCCGAGCTGGAAGAAGCAACTAATAACTTTTCGAAGAAAGTCGGTAAAGGCAGCTTCGGATCAGTCTATTACGGGAAGATGGCGGATGGAAAAGAAGTAGCGGTTAAAATCATGGCCGAGTCATCAGCACATGGGAATCAGCAGTTTACGACCGAGGTTGCCTTATTATCACGAATTCATCACCGAAATTTGGTACCTTTGATCGGGTACTGTGAAGAAGAGCATCAACGGATTCTCGTTTATGAATATATGCATAATGGAACGTTACGAGATCACTTATATGGTAGTACCGACCCGACGCACTTGGACTGGCTGCCTCGTCTGCACATTGCTGAAGATGCAGCTAAAGGGCTCGAGTATTTGCACACGGGATGCAGTCCAAGTATCATCCATCGAGATGTAAAAACGAGCAACATCCTCCTCGACATCAATATGAGAGCGAAAGTTTCCGACTTTGGCCTCTCGAGGCAAGCCGAGGAAGACTTGACCCATGTCTCGAGCGTCGCTCGAGGAACAGTAGGCTACCTGGATCCTGAGTACTACGCTAGTCAACAACTGACCGAAAAGAGCGACGTTTATAGTTTTGGAGTCGTTTTGCTCGAACTGATCTCCGGGAAGAAACCCGTCTCACCAGAGGACTATGGCAGTGAATTGAATATCGTTCATTGGGCGAGGTCGTTGGTCCATAAAGGGGACGTGACGAGCATCATCGATCCGTTTCTAAACGGAAAAGTCAAAATAGAATCGGTATGGAGAATCGCCGAAGTCGCCATTCAGTGTGTGCAGCAGCATGGAGTTTCCAGGCCAAGGATGCAGGAAGTCATTGTGGCTATACAAGATGCAATCAAGATTGAACAAGGCATTGAAGGAAACCAGAAACTATCTTCAGGCAGTTCAAGAACACAATCGTGTCGAAAAACGTTGCTGACGACGTTTCTTGAGATCGAGAGCCCCGACGGTTCGCTGCTTCCCTCTGCAAGATAA 2820 44.61 MQISDKNQWVLFIFFDLQMGFPRFLVLILLVVSSVDCQVKEFISIDCGGSKNYTDPVTGLAWISDAGVMDAGGSSPVENPHGNLMQYGTRRDFPIDDKKYCYTLETEERRRYLVRATFQYGSLKNEETYPKFDLYLDATKWSTVTIFDASRVYVKEMIIRAPSSSFDVCICCATTGYPFISTLELRPFNLSMYATDFEDDFFLEVAARVNFGALSKDVIRYPDDPYDRIWDSDLEKRQNYLVGVAPGTERISTMNNINVMTREYPPVKVMQTAVLGTKGVLSYRLNLDDFPANARAYAYFAEIEELGRNETRKFKLEEPNIPDSSNAVVNIAENANGTYTLYEPSYMNVSLSFVLSFSFVKTRDSTRGPLLNALEISRYVEIDAKTDGRDEAVVNALRTMSAESVQTNQGDPCVPTSWEWVTCTATKPPRISKIELSRRNVKGDIPPEINTMDGLTELWLDGNFLAGSLPDMSNLVNLKILHLENNKLTGTLPSYLGTLPNLQELYIQNNAFSGEIPLELLAKKLVFKYDGNLGLHASKRYNMHSKVIIGVSLGVLVLLILLLVGSFLLLHKLRRRTTPYHKKGGSLKGSTKRSFGYSIGKGDEGIAYYLSLAELEEATNNFSKKVGKGSFGSVYYGKMADGKEVAVKIMAESSAHGNQQFTTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDHLYGSTDPTHLDWLPRLHIAEDAAKGLEYLHTGCSPSIIHRDVKTSNILLDINMRAKVSDFGLSRQAEEDLTHVSSVARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGSELNIVHWARSLVHKGDVTSIIDPFLNGKVKIESVWRIAEVAIQCVQQHGVSRPRMQEVIVAIQDAIKIEQGIEGNQKLSSGSSRTQSCRKTLLTTFLEIESPDGSLLPSAR 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8942293 8949847 + CmoCh18G007110.1 Cmo18g00711 402484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00711 939 PANTHER OS07G0107800 PROTEIN-RELATED 27 900 - -
Cmo18g00711 939 Gene3D Transferase(Phosphotransferase) domain 1 696 910 - -
Cmo18g00711 939 Gene3D Phosphorylase Kinase; domain 1 603 695 - -
Cmo18g00711 939 Pfam Malectin-like domain 45 377 IPR024788 -
Cmo18g00711 939 Gene3D Ribonuclease Inhibitor 391 532 IPR032675 -
Cmo18g00711 939 ProSiteProfiles Protein kinase domain profile. 620 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo18g00711 939 CDD STKc_IRAK 626 887 - -
Cmo18g00711 939 Pfam Leucine Rich repeats (2 copies) 477 516 IPR025875 -
Cmo18g00711 939 SUPERFAMILY L domain-like 413 520 - -
Cmo18g00711 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Cmo18g00711 939 SUPERFAMILY Protein kinase-like (PK-like) 605 887 IPR011009 -
Cmo18g00711 939 PANTHER TYROSINE KINASE DOMAIN PROTEIN 27 900 - -
Cmo18g00711 939 Pfam Protein tyrosine and serine/threonine kinase 622 887 IPR001245 GO:0004672|GO:0006468
Cmo18g00711 939 SMART serkin_6 620 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo18g00711 939 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01903 Cmo18g00711 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00343 Cmo-Chr6:1665485 Cmo18g00711 Cmo-Chr18:8942293 0 dispersed
Cmo06g00345 Cmo-Chr6:1670653 Cmo18g00711 Cmo-Chr18:8942293 1.28E-66 dispersed
Cmo14g00177 Cmo-Chr14:803287 Cmo18g00711 Cmo-Chr18:8942293 0 dispersed
Cmo18g00711 Cmo-Chr18:8942293 Cmo01g01385 Cmo-Chr1:10902171 1.68E-134 dispersed
Cmo19g00625 Cmo-Chr19:6844134 Cmo18g00711 Cmo-Chr18:8942293 1.03E-52 dispersed
Cmo18g00711 Cmo-Chr18:8942293 Cmo04g01903 Cmo-Chr4:9700720 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75067 PF12819 Malectin_like 5.50E-87 CL0202 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00711 - - csv:101207149 1630.92