Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00744 ATGTCCTTCCTTCATTTCCCTCCGTGGCTTCACCTCATCATCTTCCTCTCTTCACTTTTCATCATCCTAAAATGGAAAGCAACTGCAAATAGAAGAAAGCGTAATTTTCCCCCAAGTCCACCGAAGCTTCCGATCATTGGAAACTTGCATCAGCTTGGGAAGCTCCCACACAAATCCCTATGGCGCCTCTCTCAGCTTTACGGTCCCATTATGAGCCTCAGCCTAGGCCGTATAGAAACCATCATCATATCATCTGCAGAGACTACTCGTGCCCTGTTGAAAACCCACGATCTTCAAAGCTGCAATAGACCACAAACACAAGCTGTCAAAAAATTCTCTTACAATTTCCTTGACATTGCATTTTCACCTTATAGCGATTACTGGCGAGAGATACGCAAAATTTGTATGCTTGAGTTTTTCAATATGAAGAGGGTGTTATCTTACGAACCCATTAGAGAGCAAGAAGTTGGTTTACTTATTGAATCAATTTCACAATCAGCTTCTTGCGGAGCTGTTGTTGATCTTAGTGAGAAGTCCATTGCTCTCACTGCTGGTGTTATATTTAGAATTGCATTTGGAAAGCCGTTTGAAGGGAATGGATTTCATGAGCTTATAAGTGAAATTGAGGCCCTCCTAGGAAGCTATAGTGCTTCTGAGTTTTTTCCAGTTCCTTTTGTGGGAGAGGTATTTGATTGGTTTAGTGGTCGAGAAACTAAACTTGAAAGGGTTTTTAACGAGATGAATGCTCTATTTCAAGAGGTGATTGATGAACATCTTTGTCCTGAAAGGCTTAAGCCAGAGCAAGATGATATCATTGATGTGCTTTTGGCTATTAGTAAAAAGCAAGTTGAACCTTGCACGGTTGTCATTACCCATGAAAACATCAAAGCCATTCTGTTTGACATATTTGTGGCAGGATTAGACACTGGCTCAATTACAATCGTCTGGGCAATGGCAGAACTCGCAAAAAACTCAAAATTGATGAAGAAAGCTCAAGAAGAAATCAGAAACTATGTGGGAAACAAACGAAAGGTAACAGAGAAAGACGTAGAAGAGCTTCCATATTTGAAAATGATAGTGAAAGAGACACTAAGATTACATCCACCGGCACCTCTTCTTCTTCCAAGAGAAACCATTTCTCATTTCAAAATTGAAGACTATAATTTTTACCCGAAAACGATGGTTCAAGTCAACGTTTGGGCAATTGGACGAGACCCCACATGCTGGAAAGACCCAGAAGAGTTCCTTCCAGAGAGATTTGCAGAGAGCTCGATTGATTACAAAGGACAACATTTTGAGTTCTTGCCATTCGGGGTTGGTCGGAGGATATGCCCGGGGTTGAATATGGGGGTGAAAACTGTGGAGTTAGCTTTAGCGAATCTTTTGTACCATTATGATTGGAAGCTACCAAATGGGATGAAAGAGGAAGACTTGGACATGGAAGAGAATTCGGGTTTGAGTCTCACCATCTACAAAAAGTTGCCTCTCAAGCTTGTACCAATTTTATACCATCCCTGA 1518 41.24 MSFLHFPPWLHLIIFLSSLFIILKWKATANRRKRNFPPSPPKLPIIGNLHQLGKLPHKSLWRLSQLYGPIMSLSLGRIETIIISSAETTRALLKTHDLQSCNRPQTQAVKKFSYNFLDIAFSPYSDYWREIRKICMLEFFNMKRVLSYEPIREQEVGLLIESISQSASCGAVVDLSEKSIALTAGVIFRIAFGKPFEGNGFHELISEIEALLGSYSASEFFPVPFVGEVFDWFSGRETKLERVFNEMNALFQEVIDEHLCPERLKPEQDDIIDVLLAISKKQVEPCTVVITHENIKAILFDIFVAGLDTGSITIVWAMAELAKNSKLMKKAQEEIRNYVGNKRKVTEKDVEELPYLKMIVKETLRLHPPAPLLLPRETISHFKIEDYNFYPKTMVQVNVWAIGRDPTCWKDPEEFLPERFAESSIDYKGQHFEFLPFGVGRRICPGLNMGVKTVELALANLLYHYDWKLPNGMKEEDLDMEENSGLSLTIYKKLPLKLVPILYHP 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9146840 9148513 - CmoCh18G007440.1 Cmo18g00744 402517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00744 505 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 Gene3D Cytochrome P450 21 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PANTHER CYTOCHROME P450 19 502 - -
Cmo18g00744 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Cmo18g00744 505 PANTHER CYTOCHROME P450 71B11-RELATED 19 502 - -
Cmo18g00744 505 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00744 505 Coils Coil 328 348 - -
Cmo18g00744 505 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g00729 Cmo-Chr18:9045158 Cmo18g00744 Cmo-Chr18:9146840 0 dispersed
Cmo18g00738 Cmo-Chr18:9099920 Cmo18g00744 Cmo-Chr18:9146840 2.57E-72 dispersed
Cmo18g00744 Cmo-Chr18:9146840 Cmo18g00751 Cmo-Chr18:9185496 0 dispersed
Cmo18g00742 Cmo-Chr18:9130163 Cmo18g00744 Cmo-Chr18:9146840 2.07E-41 proximal
Cmo18g00744 Cmo-Chr18:9146840 Cmo18g00746 Cmo-Chr18:9158443 1.06E-22 proximal
Cmo18g00744 Cmo-Chr18:9146840 Cmo04g01877 Cmo-Chr4:9459183 2.10E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00744 - K01773 cmos:111449354 830.476