Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00829 ATGGGAAAGCTAAGCTTGAGCTGTTGGAGTAGCTTTGTTGAGAATTCAAAGCCTTACTTTGCCATGATATCTTTACAATTTGGATATGCTGGCATGAACATCATCTCCAAAGTCTCTCTTAGTAGAGGGATGAGCCATTACGTTCTCGTCGTATATCGACACGCTTTCGCTACCGCTTCTATTGCTCCCTTCGCTTTCTTCTTCGAACGGAGAGAACAACCGAAAATAACACTCAAAGTTTTCACTCAAATCTTCGTGTTGGCTTTGCTTGGCCCTGTTATCGATCAAAACTTCTATTATGCTGGATTGAAATACACTTCACCAACTTTCTCGTGTGCCATGAGCAACATGCTGCCTGCAATGACATTCGTGATGGCTGTGATCTTCAGGATGGAAAAATTAGAGATGAAGAAGCTGAGATGCCAAGCCAAGTTCTTGGGAACTTTAGTGACGGTGGTTGGTGCTATGCTGATGACATTATACAAAGGCCCATTGATTCAAATGGCTTGGTCTAAACACTCTCATGTTCCCACAAGTTCTAATGATCAAGCTTCTGCCAATAAAGATTGGTTCAAAGGCTCAATCTTCCTCATTATTGCCACTCTTGCTTGGTCTTCTCTTTTCGTCTTGCAGAATCAGGCATTGAAGACATACATGAACCACCAGCTAACCCTCACCACACTAGTATGCTTTATGGGGACCTTACAAGCCATAGCTGTGACTGTAGTAGCTGAACACAAAGCTTCTGTTTGGAGAATTGGTTGGGACATGAACCTCCTTGCTGCCGCCTACGCCGGAATTGTGACGTCAAGTATTTCATATTATGTACAAGGGTTGGTGATGAAGAAGAGAGGACCTGTATTTGCAACAGCATTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCTTTCATCCTATCTGAAAAAATTTACCTTGGAGGAATAATAGGATCCATCTTGATAGTATTTGGATTATATTCAGTCCTATGGGGGAAGCATAAGGAGAATTTGGAGACCAAAAGTGCTGATGATGATGCTCATAAATTACCACAAGCAATTAAGCTTTCTTCTCAACCAAATAATAATAATAATCTAAATCTCGAACCTAATAAGCTCTCGAATTCACTTATTATTTCCATGCCCGACCCTGAAAGCCCCATCAAGCCGAACCAAAACCCATGA 1188 41.75 MGKLSLSCWSSFVENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFAFFFERREQPKITLKVFTQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLEMKKLRCQAKFLGTLVTVVGAMLMTLYKGPLIQMAWSKHSHVPTSSNDQASANKDWFKGSIFLIIATLAWSSLFVLQNQALKTYMNHQLTLTTLVCFMGTLQAIAVTVVAEHKASVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILSEKIYLGGIIGSILIVFGLYSVLWGKHKENLETKSADDDAHKLPQAIKLSSQPNNNNNLNLEPNKLSNSLIISMPDPESPIKPNQNP 395
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 9683649 9687903 + CmoCh18G008290.1 Cmo18g00829 402602
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00829 395 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020|GO:0016021
Cmo18g00829 395 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Cmo18g00829 395 PANTHER WAT1-RELATED PROTEIN 12 369 IPR030184 GO:0016021|GO:0022857
Cmo18g00829 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 336 - -
Cmo18g00829 395 PANTHER WAT1-RELATED PROTEIN 12 369 - -
Cmo18g00829 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo04g02852 Cmo18g00829 CCT
Cmo04g02852 Cmo18g00829 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00792 Cmo-Chr9:4054770 Cmo18g00829 Cmo-Chr18:9683649 1.63E-123 dispersed
Cmo11g01277 Cmo-Chr11:8407466 Cmo18g00829 Cmo-Chr18:9683649 5.44E-83 dispersed
Cmo11g01280 Cmo-Chr11:8485082 Cmo18g00829 Cmo-Chr18:9683649 1.88E-82 dispersed
Cmo14g00503 Cmo-Chr14:2492288 Cmo18g00829 Cmo-Chr18:9683649 7.13E-157 dispersed
Cmo14g00505 Cmo-Chr14:2499757 Cmo18g00829 Cmo-Chr18:9683649 7.63E-144 dispersed
Cmo15g01404 Cmo-Chr15:9557270 Cmo18g00829 Cmo-Chr18:9683649 2.85E-67 dispersed
Cmo18g00829 Cmo-Chr18:9683649 Cmo03g00455 Cmo-Chr3:5080508 3.88E-119 dispersed
Cmo03g01092 Cmo-Chr3:8612856 Cmo18g00829 Cmo-Chr18:9683649 1.05E-155 transposed
Cmo04g02086 Cmo-Chr4:12589069 Cmo18g00829 Cmo-Chr18:9683649 8.95E-62 transposed
Cmo05g01072 Cmo-Chr5:8634436 Cmo18g00829 Cmo-Chr18:9683649 2.00E-83 transposed
Cmo18g00829 Cmo-Chr18:9683649 Cmo04g01372 Cmo-Chr4:6992590 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00829 - - csv:101206648 624.394