Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo18g00887 | ATGGGGAAGAAAGGGGGTTGGTTTGCTGCAGTGAGGAAGGTTCTCAGTAACAAGATACAAGAAAGATCCAAGAAAAAATGGTTCCAAAGGGAGGAGAGTGTGGACACATTTGTGGAACCATCCCTGTTAGATGTTCCCGCAGAACCTTCTCCTATGGAAGATGATATCAATCAAACTAAGCCGGAGGATGAACCGAGCGAGCTTCCGCATTCCGAGGCGGTGGAGCCTGCTGTTGATGAAGCTCAGCTGGCTGTGGAGGATGAACATCTACCCAGTATTATACCCTGTAAGCCAGAAATGACTGAGGAAACAGGAGCTATTATTATTCAATCAGCCTTTCGTGGATATAAGGCGAGGAAAGTATCAAGGGGTCTCAAAGCGATAATGAGATTGAGGTCGTTGGTACAAGGCCACTCTGTGAAACGGCAGGTGGCCTCTACTTTAAAAAGTATGCAAACTCTTGCACATGTACAGTCAGAGGTTCGTGCAAGGAGAGTAAGAATGTCGGAAGAAAATCAGGATTTCCAGCGGCAACTTTGTAACAAACGTGAGAAAGATCATGAGAAGTTCAAAACTTCTATGGATGATGTCTGGAATCCTAGCACCCATTCTAAAGCACAAATGGAAGCCAAACTATTGAACAGGCAAGAGGCCGCAACAAGAAGAGAACGAGCTTTGGCTTATGCTCACTCGCATCAGCGAACATGGAAGAGTTCTTCAAAAACTACAACCCATTCTGTCATGGATTCAAACAATCCCTACTGGGGCTGGAGTTGGTTGGAGAGATGGATGGCAGCTCGCCCATGGGAACTCCAAAGCACAGCCGATCACCCAGATCACAATTCTGTCACAAACGTCCCAACTCATGCATCTACAATCGACATAATCCAAGTTTATGCTCGTCGCGATCCGAACTCCCATACGAAGCCTTCTCCAAGGACTCCTACTAGCCAAAAGGCAAGCCAAGTGCATAGGCATCAGTCACCTTCCATTCCTAGAGCATTATCTTCATCATCTAGCAAAAAGAAAACAAATGCAGCCAACTTAAAGGTAGGCAGCTGGAGTGGGGATGATGACATGAGAAGCCCCGTGAGTGTCAACTCAAAGCTCACCCGGAGGCATAGTATAGGAGGGTCATCATTCAGGGATGACATAAGCATTGCCAGTTTACCTTCAGTTTCGAGTTACACGCCAACGTCGAAGACGGCTGCTAAGGCTCGGTCCCGGTTGGCAAGTCCATCTGTGACACTGAAGAAAGAGGCAATGGAAAAAGGATCTGCAAGCACAGGTTCTGCAAAGAAGCGGCTCTCCATTACAGGTCCATTGCTTCGTCATTGCAGTTCCGAGAAAACCGAATCGGGTTCGCCTCTGAATCGAAGGAAGGGATGCGGATTTCTGGATGAAAATTTCACATTCTCTCGTCTGTCACTGGAATTCACTCAAATGGCTACACCATTCCTCGCAGGCCTAGCGGTAGCTGCTGCGGCTCTTGCTGGTAGATATGGAATTCGAGCTTGGCAAGCATTCAAGACACGGCCACCACAAGCCAGATCACGCAAATTCTATGAAGGTGGTTTCAATCCTACAATGACAAAGAGGGAAGCAGCTCTTATTCTTGGTGTTAGAGAAAATACACCTCCAGAAAAGATTAAGGAAGCACATAGAAGGGTAATGATAGCAAACCATCCCGATGCCGGTGGCAGCCATTATCTTGCTTCCAAGATCAATGAAGCCAAGGATGTCCTGCTCGGAAAATCTGAAGGCAGCCCATCTGCATTTTAA | 1782 | 47.08 | MGKKGGWFAAVRKVLSNKIQERSKKKWFQREESVDTFVEPSLLDVPAEPSPMEDDINQTKPEDEPSELPHSEAVEPAVDEAQLAVEDEHLPSIIPCKPEMTEETGAIIIQSAFRGYKARKVSRGLKAIMRLRSLVQGHSVKRQVASTLKSMQTLAHVQSEVRARRVRMSEENQDFQRQLCNKREKDHEKFKTSMDDVWNPSTHSKAQMEAKLLNRQEAATRRERALAYAHSHQRTWKSSSKTTTHSVMDSNNPYWGWSWLERWMAARPWELQSTADHPDHNSVTNVPTHASTIDIIQVYARRDPNSHTKPSPRTPTSQKASQVHRHQSPSIPRALSSSSSKKKTNAANLKVGSWSGDDDMRSPVSVNSKLTRRHSIGGSSFRDDISIASLPSVSSYTPTSKTAAKARSRLASPSVTLKKEAMEKGSASTGSAKKRLSITGPLLRHCSSEKTESGSPLNRRKGCGFLDENFTFSRLSLEFTQMATPFLAGLAVAAAALAGRYGIRAWQAFKTRPPQARSRKFYEGGFNPTMTKREAALILGVRENTPPEKIKEAHRRVMIANHPDAGGSHYLASKINEAKDVLLGKSEGSPSAF | 593 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 10128215 | 10137298 | - | CmoCh18G008870.1 | Cmo18g00887 | 402660 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo18g00887 | 593 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 443 | - | - | |
Cmo18g00887 | 593 | SMART | dnaj_3 | 533 | 587 | IPR001623 | - | |
Cmo18g00887 | 593 | MobiDBLite | consensus disorder prediction | 392 | 409 | - | - | |
Cmo18g00887 | 593 | ProSiteProfiles | dnaJ domain profile. | 534 | 593 | IPR001623 | - | |
Cmo18g00887 | 593 | MobiDBLite | consensus disorder prediction | 39 | 72 | - | - | |
Cmo18g00887 | 593 | MobiDBLite | consensus disorder prediction | 360 | 375 | - | - | |
Cmo18g00887 | 593 | MobiDBLite | consensus disorder prediction | 303 | 378 | - | - | |
Cmo18g00887 | 593 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 1 | 443 | - | - | |
Cmo18g00887 | 593 | SUPERFAMILY | Chaperone J-domain | 524 | 584 | IPR036869 | - | |
Cmo18g00887 | 593 | CDD | DnaJ | 538 | 582 | IPR001623 | - | |
Cmo18g00887 | 593 | MobiDBLite | consensus disorder prediction | 309 | 351 | - | - | |
Cmo18g00887 | 593 | Gene3D | DnaJ domain | 520 | 586 | IPR036869 | - | |
Cmo18g00887 | 593 | Pfam | IQ calmodulin-binding motif | 106 | 120 | IPR000048 | GO:0005515 | |
Cmo18g00887 | 593 | ProSiteProfiles | IQ motif profile. | 102 | 130 | IPR000048 | GO:0005515 | |
Cmo18g00887 | 593 | MobiDBLite | consensus disorder prediction | 55 | 72 | - | - | |
Cmo18g00887 | 593 | MobiDBLite | consensus disorder prediction | 392 | 433 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00353 | Cmo-Chr6:1719317 | Cmo18g00887 | Cmo-Chr18:10128215 | 4.47E-53 | dispersed | |
Cmo15g00445 | Cmo-Chr15:2025442 | Cmo18g00887 | Cmo-Chr18:10128215 | 8.48E-121 | dispersed | |
Cmo03g01251 | Cmo-Chr3:9610366 | Cmo18g00887 | Cmo-Chr18:10128215 | 1.15E-54 | transposed | |
Cmo18g00887 | Cmo-Chr18:10128215 | Cmo04g01429 | Cmo-Chr4:7278716 | 3.49E-159 | wgd | |
Cmo18g00887 | Cmo-Chr18:10128215 | Cmo04g02721 | Cmo-Chr4:19731029 | 1.04E-123 | wgd | |
Cmo18g00887 | Cmo-Chr18:10128215 | Cmo07g00981 | Cmo-Chr7:4829625 | 4.08E-64 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo18g00887 | - | - | cmax:111466344 | 811.216 |