Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00890 ATGGCAGCCTGTGGAGAAGAGCAGCGTACTTTGGAAGATACTTCAACATGGGCTGTTGCGGTTGTTTGTTTTTTCTTGGTTGCTATTTCAATCTTCATTGAACATCTCATTCACCTCACCGAAAAGTGGCTGGAGAGAAGGCATAAGCCAGCACTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATATCCCTACTTCTAACTATTGGCCAAGATGCTGTCACTAAAATTTGCGTTTCGAGGGAGCTTGCGGCAACTTGGCGTCCCTGTGCAGGAAAAGAAAAAGCACCCAAGAACAGCCGTCTTAAACTTTTTGAATTTTTAGATCCTGATTATGGTTCGAGGCGTATTTTAGCTTCAAAAGGAAACGATGCATGCGCTGATAGGGGCCAAGTCGCCTTTGTGTCAGCATATGGAATCCACCAGCTCCATATTTTCATCTTTGTACTGGCTGTCTTCCATGTCTTATACTGCATCGCCACTTTGGCTTTGGGCAGAACAAAGATGAGAAAATGGAAGGCTTGGGAGGACGAGACAAAAACACTTGAATACCAGTACTATAATGATCCAGCAAGGTTTAGATTTGCTAGAGATACAACGTTTGGACGCCGACACTTGAGCTTCTGGAGTCGTACACCAGTTTTCCTCTGGATTGTTTGTTTCTTCAGACAATTCTTTGGATCAGTTACCAAGGTTGATTACATGACATTGAGACATGGATTCATCGTTGCTCATTTGGCTCCCGGAAGTGAAGTAAAATTTGATTTCCACAAATACATTAGCAGATCTCTCGAAAATGACTTTAAAGTTGTTGTGGGGATTAGCCCAGCGATGTGGCTATTTGCTGTTCTGTTCATCCTAACCAATACGCATGGGTGGTATTCATATCTATGGCTGCCTTTCATCTCCTTAATTATAATTCTATTGGTGGGAACGAAGCTCCATGTTATCATAACAAAGATGGGATTGACAATTCAAGAAAGGGGCCATGTTATAAAGGGTGTTCCCGTCGTTCAGCCCCGGGACGATCTCTTTTGGTTCGGTCGCCCAAAACTTATTCTCTTTCTGATTCACTTCGTTCTCTTTCAGAATGCATTTCAGCTTGCCTTCTTTGCTTGGACCACATATGCATTTAGCTTGAGATCTTGCTTCCATCAGAAGATTGAAGACATTGCCATTAGACTCTCAATGGGGGTCATCATACAAGTTCTATGCAGTTACGTGACGCTCCCACTCTATGCTCTGGTTACTCAGATGGGCTCTAACATGAAACCAACCATTTTCAACGAACGAGTAGCAACGGCATTGAAGAACTGGCACCACTCTGCCAAAAAACACATGAAGCAACACCGCAACCCGGATGGTACCTCGCCATTCTCAAGCAGGCCAGCTACTCCAACGCACGGTATGTCTCCCCTCCACCTTCTGCACAAACATCAGCAGAGCAGCACATCTCCCAGGCTATCTGATGCCGAACACGACCGTTGGGGCATTGAAGAGCGACCTCTTTCACATCATAGTAGAGCCCATGATCATCAAGAACACGAACATTCCATTCGACCTTCTTCACATCATAGTAGAGCCCATGATCATCAAGAACACGAACATTCCATTCGACCTTCTTCACATCATAGTAGAGCCCATGATCATCAAGAACACGAACATTCTGTTTCCAGTGGAGAACAGGAGATGACAGCTCAACAGCCAAGTTCAACCATACCAGGTACCACACCTCGTCCTGCTCGTAACGAAAATGAAATCACTAGGACTCCCTCAGACTTCTCATTTGCCAAATGA 1815 44.52 MAACGEEQRTLEDTSTWAVAVVCFFLVAISIFIEHLIHLTEKWLERRHKPALVEALEKVKAELMLLGFISLLLTIGQDAVTKICVSRELAATWRPCAGKEKAPKNSRLKLFEFLDPDYGSRRILASKGNDACADRGQVAFVSAYGIHQLHIFIFVLAVFHVLYCIATLALGRTKMRKWKAWEDETKTLEYQYYNDPARFRFARDTTFGRRHLSFWSRTPVFLWIVCFFRQFFGSVTKVDYMTLRHGFIVAHLAPGSEVKFDFHKYISRSLENDFKVVVGISPAMWLFAVLFILTNTHGWYSYLWLPFISLIIILLVGTKLHVIITKMGLTIQERGHVIKGVPVVQPRDDLFWFGRPKLILFLIHFVLFQNAFQLAFFAWTTYAFSLRSCFHQKIEDIAIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMKPTIFNERVATALKNWHHSAKKHMKQHRNPDGTSPFSSRPATPTHGMSPLHLLHKHQQSSTSPRLSDAEHDRWGIEERPLSHHSRAHDHQEHEHSIRPSSHHSRAHDHQEHEHSIRPSSHHSRAHDHQEHEHSVSSGEQEMTAQQPSSTIPGTTPRPARNENEITRTPSDFSFAK 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10160316 10164535 + CmoCh18G008900.1 Cmo18g00890 402663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00890 604 MobiDBLite consensus disorder prediction 446 478 - -
Cmo18g00890 604 MobiDBLite consensus disorder prediction 459 473 - -
Cmo18g00890 604 PANTHER MLO-LIKE PROTEIN 5 547 - -
Cmo18g00890 604 MobiDBLite consensus disorder prediction 510 604 - -
Cmo18g00890 604 PANTHER MLO-LIKE PROTEIN 1 5 547 IPR004326 GO:0006952|GO:0016021
Cmo18g00890 604 Pfam Mlo family 8 485 IPR004326 GO:0006952|GO:0016021
Cmo18g00890 604 MobiDBLite consensus disorder prediction 566 604 - -
Cmo18g00890 604 MobiDBLite consensus disorder prediction 510 565 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00883 Cmo-Chr2:5467485 Cmo18g00890 Cmo-Chr18:10160316 0 dispersed
Cmo13g00188 Cmo-Chr13:1302615 Cmo18g00890 Cmo-Chr18:10160316 0 dispersed
Cmo13g00190 Cmo-Chr13:1336245 Cmo18g00890 Cmo-Chr18:10160316 5.31E-176 dispersed
Cmo16g01287 Cmo-Chr16:9165797 Cmo18g00890 Cmo-Chr18:10160316 4.13E-101 dispersed
Cmo18g00890 Cmo-Chr18:10160316 Cmo20g00511 Cmo-Chr20:2450421 0 dispersed
Cmo18g00890 Cmo-Chr18:10160316 Cmo04g01433 Cmo-Chr4:7310252 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00890 K08472 - csv:101218929 988.023