Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00914 ATGGTCGCCGCCGGTCAGGGAGGCGACAGAGCAATCTCCGGCAGCTCCAACATCAGAACCATCGCCGTCCACATCATCACCGGGCGGTGGTTTGTGGTGTTCGCTTCACTTCTAATCATGGCAGCCGCCGGCGCCACCTACATGTTCAGCTTATATTCCAACGACATAAAGTCGGTTCTAGGTTACGACCAAACGACGTTGAATTTGTTGAGCTTTTTCAAGGATTTGGGTGCGAACGTCGGTGTTTTGTCTGGCCTTATCAATGAAGTTACACCGCCGTGGGTGGTTCTATCTATCGGCGCCGTCTTGAATTTCTTTGGTTACTTCATGATTTGGCTCGCCGTTACTAAGCGGATCTCGACGCCGAAAGTTTGGCAAATGTGTCTCTATATTTGTGTTGGAGCTAATTCTCAATCCTTCGTTAATACCGGTTCGCTCGTTACTTGTGTCAAGAATTTTCCCGAAAGTCGAGGCGTCGTTCTCGGTATCTTAAAAGGGTATGTCGGGCTAAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAATTAATATTCTCCCAAGCCGAATTCGGTGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGTCGAAGAATACAACCTCTCAAAACTCAAATCCGCCGCCATTAATCCCCCAAACCCACTTCAAATCCTTACAGAGAAACCCAATCCCCCAAAAACAGAGCCCCAAAAACAAACCCGACAACAAAAACAACCATCTTGCTGGACAACAATCTTCAGCCCGCCGGAACGCGGCGAGGATTTCACGATTCTCCAAGCTCTGTTCAGCTTGGACATGGCGATTCTGTTCTTCTCTGCAATTTGCGGCGTCGGCGGAACTTTGACGGCGATTGACAATCTGGGTCAGATCGGAATGTCCTTAGGATACCCAAAAAGAAGCATTAGCACATTCGTGACACTCGTTAGTATATGGAATTACCTCGGACGTGTCGCCTCTGGTTTTGTCTCTGAAATTGTTCTAACAAAATACAAATTCCCACGTCCTTTAATGCTTTCTTTAACACTTCTTTTGTCATGTGTCGGTCATTTGATCATCGCCTTCGCCGTTCCAAATGGGCTTTATGTAGCTTCAATCGTGATCGGATTCTGTTTCGGAGCTCAGTGGCCGTTGCTTTTCGCCATAATTTCCGAGCTATTTGGGTTGAAATATTACTCTACGCTTTACAATTTCGGGTCGGTGGCTAGCCCGATTGGATTATACGTTTTGAATGTGAAAGTGGCCGGGAATTTGTACGACAAAGAGGCGGCGAAGCAGCTGGCGGCGAAAGGGCTTGTGAGAAAAACAGGGGAGGAGCTGAAATGCTACGGCGGAGAGTGTTTTAAGCGGTCGTTTCTTGTGATTACCGGAGTTACTTTGTTGGGTATGTTTGTTTCGTTGATTTTAGTGATTAGGACGAGGGGTTTTTACAAGAGTGATATTTATAAGAAGTTTCGAGATGAAGCTGAAGCAGAGGTGGTCGGAAATGGCGCTGTGACGGCCGCCGGAGCGCCGGAGGAGACGAGAAGCCGATAG 1770 48.31 MVAAGQGGDRAISGSSNIRTIAVHIITGRWFVVFASLLIMAAAGATYMFSLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISTPKVWQMCLYICVGANSQSFVNTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGSDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLALAGFLMLMIIIESKLIFSQAEFGGSAAVVLLLLFLPLAVVIVEEYNLSKLKSAAINPPNPLQILTEKPNPPKTEPQKQTRQQKQPSCWTTIFSPPERGEDFTILQALFSLDMAILFFSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFVSEIVLTKYKFPRPLMLSLTLLLSCVGHLIIAFAVPNGLYVASIVIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNLYDKEAAKQLAAKGLVRKTGEELKCYGGECFKRSFLVITGVTLLGMFVSLILVIRTRGFYKSDIYKKFRDEAEAEVVGNGAVTAAGAPEETRSR 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10319980 10323089 + CmoCh18G009140.1 Cmo18g00914 402687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00914 589 Pfam Nodulin-like 29 274 IPR010658 -
Cmo18g00914 589 PANTHER MFS TRANSPORTER 13 572 - -
Cmo18g00914 589 MobiDBLite consensus disorder prediction 294 319 - -
Cmo18g00914 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 572 - -
Cmo18g00914 589 CDD MFS_Mch1p_like 28 541 - -
Cmo18g00914 589 SUPERFAMILY MFS general substrate transporter 28 554 IPR036259 -
Cmo18g00914 589 MobiDBLite consensus disorder prediction 302 319 - -
Cmo18g00914 589 Gene3D MFS general substrate transporter like domains 343 554 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00393 Cmo-Chr6:1920809 Cmo18g00914 Cmo-Chr18:10319980 0 dispersed
Cmo13g00229 Cmo-Chr13:1783837 Cmo18g00914 Cmo-Chr18:10319980 0 dispersed
Cmo15g00510 Cmo-Chr15:2350179 Cmo18g00914 Cmo-Chr18:10319980 0 dispersed
Cmo18g00914 Cmo-Chr18:10319980 Cmo13g00208 Cmo-Chr13:1599587 0 dispersed
Cmo18g00914 Cmo-Chr18:10319980 Cmo04g01463 Cmo-Chr4:7484058 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00914 - - csv:101204293 958.362