Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00956 ATGAGGGTGCCTGCAACTCTGGGCGATGATTTTCTGCGAGAAAGAGCGGCAAAGATGAGAGAATCTCTGCAAAAGAGCCAAACTATTACTGATAATGTTGTTTCGATTCTCGGCTCATTTGACCACCGTCTTTCTGCTCTCGAAACCGCTATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTTATTTTAGCACAGTTTGATCTCTCTCGCCAGGCAGAAATGAAAATTCTCAAAGGGCCTCATGAGGATTTGGAGAGTTATCTCGGGTCAATCGGTCAGTTAAGAAACATTATTAAATTCTTTAGCAGCCAGAAAGGTTTTAAGAGTAGTGAGGTAGTGTTGAATCATGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTTGAAGATGAGTTTAGGCAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAGCGCCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGACTCTCCTGGTCATCATGACGATTCAAATGGAAAGAATCCCTCCTCAAATCACCATGCTGCACTTCATGATAATAGCTTGGAGACTGCTGTCTTCACACCTCCCACTCTCATACCTCCTCGTGTTCTACCATTGCTACACGAGTTATCGCAGCAGATGGTTCAAGCTGGTCATCAACAGCAAATTCTAAAAGTCTATAGGGATACCCGTTCAGTCGTTTTGGAAGAAAGCCTTCGGAAATTGGGAGTTGAAAAACTTAGCAAAGAGGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCCAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTACTGTTTGCTGGAGAACGACAAGTGTGCGATCAAATATTTGAAGGCTTCGAATCGCTTAGAGATCAATCCTTTGCCGAGGTTACAAGTAGTAGTGTGTCTGTGCTCTTCAGTTTTGGGGAGGCAATTGCTAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGATATGTATGAAATAATGAGAGAGCTGCACTCAGAGATTGAGACAATTTTTAAGGGTGAAGCGTGCAATGAGATCAGGGAATCTGCATCGGGTTTGACCAAACGACTTGCACAGACAGCTAAGGATACATTCGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCAGTGTTGGATGGAACAGTTCATCCTCTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTTGACTATCAGGCAACCTTGAAGCAGCTTTTCCAAGAATTTGCAGGTAGCGGTCAAACGAGTTCGGAATTGGCGTCTGTCACAATGCAAATAATGCAGGCCCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACTTGTTCCTCATGAACAACATTCATTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTTGGGGACGATTGGGTTCAGCGACATAGGAGGGTTGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGTCTTTCTGTTCAAGGCTTAACTTCCTCTGGAGGTGGCAGCATACCTGGTATAGATGGAGGAAACAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAATTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACCGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAGCGTTTCGGGCCACTAGTTGATGGTGGAAAGAATCCCCAAAAGTATGTTAGATACCAACCAGAGGATCTCGAGAGGATGCTTGGAGAATTTTTCGAAGGGAAGAACTTGAGCGAGCCTAAGCGGTAG 1962 43.17 MRVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKAAEVILAQFDLSRQAEMKILKGPHEDLESYLGSIGQLRNIIKFFSSQKGFKSSEVVLNHANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGHHDDSNGKNPSSNHHAALHDNSLETAVFTPPTLIPPRVLPLLHELSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERQVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGEACNEIRESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFAGSGQTSSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSIPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDGGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10655880 10662188 - CmoCh18G009560.1 Cmo18g00956 402729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00956 653 MobiDBLite consensus disorder prediction 168 196 - -
Cmo18g00956 653 SUPERFAMILY Cullin repeat-like 78 644 IPR016159 -
Cmo18g00956 653 Pfam Exo70 exocyst complex subunit 281 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo18g00956 653 Gene3D Exocyst complex component Exo70 76 653 - -
Cmo18g00956 653 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 649 - -
Cmo18g00956 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 649 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00855 Cmo-Chr7:4035693 Cmo18g00956 Cmo-Chr18:10655880 3.89E-118 dispersed
Cmo14g01223 Cmo-Chr14:10395134 Cmo18g00956 Cmo-Chr18:10655880 6.72E-121 dispersed
Cmo18g00956 Cmo-Chr18:10655880 Cmo10g00061 Cmo-Chr10:282379 1.95E-118 dispersed
Cmo18g00956 Cmo-Chr18:10655880 Cmo04g01515 Cmo-Chr4:7747077 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00956 K07195 - csv:101206262 1172.92