Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo18g01048 | ATGCCTACCATTAACCTAGGCCAGATTCCAAGTTTCGAAGAACATGTTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGTCTCATTAGAGTTTACGGAAATGGGTATGTGGAAAGAGCACAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCAGAGCTGGGTGTTACTTCTTGGGATGTAGTTGTGAATAAGCTGAGTAACATTTGGGCTCGTTTCTATATCCCAAAACAGTGCCAGGGGAAACTTCCTTTGCTTGTCTATTTCCATGGAGGTGGATTTTGTGTCGGCTCGGCAGCTTGGAGCTGCTACCATGAGTTCCTTGCCAAGGTATCTGCAAAAGCGGAGTGTATAATTATGTCTGTGAATTATCGTTTGGCACCAGAAAACCCTCTTCCTGCTCCTTATGAAGATGGATTAAAGACCATTTCATGGTTGAAACAAGTTGCTCTTATTGGGGGCAAGCAGAATTGGTGGTCAAGATACTGTGACTTTACCAGAATCTACCTTGGTGGTGATAGTGCGGGTGGCAACATAGCCTTCAATGTAGCCGCCAGACTTGGTGGTAAGACCACTGCTTCTGGAGCTGTGGTCTTGAAGCCGTTGGTTATTAGAGGTAACATTTTGATACAACCATTTTTTGGTGGGGAGTCCAGGACCAAATCAGAGAAGTTTCTAGTCCAACCTCCTCGTTCGGCACTGACGATGGCGGTTTCCGATACATACTGGCGGTTGGCATTGCCGTCTGGGGCAAACCGTGACCACCCTTGGTGCAATCCTTCGGCAAAAGGGTTGTTTAAGGTGGAGAATTTGAGGGTTTTGCCTAGTTTGGTATGTATATCGGAATTGGACATATTGAAAGATAGGAACTTGGAGTTCTGCTCTGCTTTACATAGAGAGGGTAAGCTGATCAATTATGTGGTTCATGAAGGAGTTGGCCATGCCTTTCAGGTTCTGAACAAATCACAGCTCTCACAGACTCGGACTCTTGAAATGATTGGTCATATCAAGGATTTCTTATGTGTATAG | 1041 | 45.05 | MPTINLGQIPSFEEHVNGFDQHDVLVEEIEGLIRVYGNGYVERAQIVPCVSNALPPELGVTSWDVVVNKLSNIWARFYIPKQCQGKLPLLVYFHGGGFCVGSAAWSCYHEFLAKVSAKAECIIMSVNYRLAPENPLPAPYEDGLKTISWLKQVALIGGKQNWWSRYCDFTRIYLGGDSAGGNIAFNVAARLGGKTTASGAVVLKPLVIRGNILIQPFFGGESRTKSEKFLVQPPRSALTMAVSDTYWRLALPSGANRDHPWCNPSAKGLFKVENLRVLPSLVCISELDILKDRNLEFCSALHREGKLINYVVHEGVGHAFQVLNKSQLSQTRTLEMIGHIKDFLCV | 346 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 11174237 | 11175277 | - | CmoCh18G010480.1 | Cmo18g01048 | 402821 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo18g01048 | 346 | Pfam | alpha/beta hydrolase fold | 90 | 321 | IPR013094 | GO:0016787 | |
| Cmo18g01048 | 346 | PANTHER | CARBOXYLESTERASE 6-RELATED | 15 | 344 | - | - | |
| Cmo18g01048 | 346 | SUPERFAMILY | alpha/beta-Hydrolases | 24 | 344 | IPR029058 | - | |
| Cmo18g01048 | 346 | PANTHER | ARYLACETAMIDE DEACETYLASE | 15 | 344 | - | - | |
| Cmo18g01048 | 346 | Gene3D | alpha/beta hydrolase | 32 | 345 | IPR029058 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo01g00472 | Cmo-Chr1:2255755 | Cmo18g01048 | Cmo-Chr18:11174237 | 2.67E-128 | dispersed | |
| Cmo18g01048 | Cmo-Chr18:11174237 | Cmo05g00198 | Cmo-Chr5:869501 | 3.13E-49 | dispersed | |
| Cmo02g01230 | Cmo-Chr2:7393445 | Cmo18g01048 | Cmo-Chr18:11174237 | 3.26E-61 | transposed | |
| Cmo05g00491 | Cmo-Chr5:2316626 | Cmo18g01048 | Cmo-Chr18:11174237 | 1.09E-58 | transposed | |
| Cmo07g00847 | Cmo-Chr7:4007882 | Cmo18g01048 | Cmo-Chr18:11174237 | 2.17E-57 | transposed | |
| Cmo18g01048 | Cmo-Chr18:11174237 | Cmo04g01599 | Cmo-Chr4:8150453 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo18g01048 | - | - | csv:101213887 | 663.299 |